Using variable rate models to identify genes under selection in sequence pairs: Their validity and limitations for EST sequences

Journal of Molecular Evolution

Volumn 64, Issue 2, 2007, Pages 171-180

  Church, Sheri A ^a,g   Livingstone, Kevin ^a,e   Lai, Zhao ^a   Kozik, Alexander ^b   Knapp, Steven J ^c,f   Michelmore, Richard W ^b   Rieseberg, Loren H ^a,d  

^a INDIANA UNIVERSITY   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

^c OREGON STATE UNIVERSITY   (United States)

^d UNIVERSITY OF BRITISH COLUMBIA   (Canada)

^e TRINITY UNIVERSITY   (United States)

^f UNIVERSITY OF GEORGIA   (United States)

^g GEORGE WASHINGTON UNIVERSITY   (United States)

Author keywords

EST; Nonsynonymous substitutions; Selection; Synonymous substitutions

Indexed keywords

ARTICLE; COMPARATIVE STUDY; GENE SEQUENCE; RELIABILITY; SEQUENCE ANALYSIS; STATISTICAL MODEL; VALIDITY;

BASE PAIRING; BASE SEQUENCE; CODON; DNA, PLANT; EVOLUTION, MOLECULAR; EXPRESSED SEQUENCE TAGS; GENOME, PLANT; HELIANTHUS; LETTUCE; LIKELIHOOD FUNCTIONS; REPRODUCIBILITY OF RESULTS; SELECTION (GENETICS);

HELIANTHUS; LACTUCA;

EID: 33846438205     PISSN: 00222844     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00239-005-0299-5     Document Type: Article

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