Transcriptional profiling of chickpea genes differentially regulated by salicylic acid, methyl jasmonate and aminocyclopropane carboxylic acid to reveal pathways of defence-related gene regulation

Functional Plant Biology

Volumn 34, Issue 1, 2007, Pages 52-64

  Coram, Tristan E ^a,b   Pang, Edwin C K ^a  

^a RMIT UNIVERSITY   (Australia)

^b WASHINGTON STATE UNIVERSITY   (United States)

Author keywords

Ascochyta blight; Microarray

Indexed keywords

CARBOXYLIC ACIDS; GENES; GENETIC ENGINEERING;

ASCOCHYTA BLIGHT; CHICKPEA; MICROARRAY; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION;

PLANTS (BOTANY);

BIOLOGICAL CONTROL; CARBOXYLIC ACID; DEFENSE MECHANISM; DISEASE RESISTANCE; ESTER; FUNGAL DISEASE; GENETIC DIFFERENTIATION; GENOTYPE; LEGUME; POLYMERASE CHAIN REACTION; SALICYLIC ACID; SIGNALING;

GENES; GENETIC ENGINEERING; PLANTS; SALICYLIC ACID;

ASCOCHYTA; CICER ARIETINUM; LATHYRUS; LATHYRUS SATIVUS; MYCOSPHAERELLA RABIEI;

EID: 33846434802     PISSN: 14454408     EISSN: None     Source Type: Journal    
DOI: 10.1071/FP06250     Document Type: Article

References (31)

1. Anderson JP, Thatcher LF, Singh KB (2005) Plant defence responses: conservation between models and crops. Functional Plant Biology 32, 21-34. doi: 10.1071/FP04136
2. Bower N, Casu R, Maclean D, Reverter A, Chapman S, Manners J (2005) Transcriptional response of sugarcane roots to methyl jasmonate. Plant Science 168, 761-772. doi: 10.1016/j.plantsci.2004.10.006
3. Brazma A, Hingamp P, Quackenbush J, Sherlock G, Spellman P et al. (2001) Minimum information about a microarray experiment (MIAME)-towards standards for microarray data. Nature Genetics 29, 365-371. doi: 10.1038/ng1201-365
4. Cho S, Muehlbauer F (2004) Genetic effect of differentially regulated fungal response genes on res istance to necrotrophic fungal pathogens in chickpea (Cicer arietinum L.). Physiological and Molecular Plant Pathology 64, 57-66. doi: 10.1016/j.pmpp.2004.07.003
5. Cho S, Chen W, Muehlbauer F (2005) Constitutive expression of the Flavanone 3-hydroxylase gene related to pathotype-specific ascochyta blight resistance in Cicer arietinum L. Physiological and Molecular Plant Pathology 67, 100-107. doi: 10.1016/j.pmpp.2005.09.011
6. Collard B, Ades P, Pang E, Brouwer J, Taylor P (2001) Prospecting for sources of resistance to ascochyta blight in wild Cicer species. Australasian Plant Pathology 30, 271-276. doi: 10.1071/AP01036
7. Coram TE, Pang ECK (2005a) Isolation and analysis of candidate ascochyta blight defence genes in chickpea. Part I. Generation and analysis of an expressed sequence tag (EST) library. Physiological and Molecular Plant Pathology 66, 192-200. doi: 10.1016/j.pmpp.2005.08.003
8. Coram TE, Pang ECK (2005b) Isolation and analysis of candidate ascochyta blight defence genes in chickpea. Part II. Microarray expression analysis of putative defence-related ESTs. Physiological and Molecular Plant Pathology 66, 201-210. doi: 10.1016/j.pmpp.2005.08.002
9. Coram TE, Pang ECK (2006) Expression profiling of chickpea genes differentially regulated during a resistance response to Ascochyta rabiei. Plant Biotechnology Journal 4, 647-666. doi: 10.1111/j.1467-7652. 2006.00208.x
10. Devoto A, Muskett P, Shirasu K (2003) Role of ubiquitination in the regulation of plant defence against pathogens. Current Opinion in Plant Biology 6, 307-311. doi: 10.1016/S1369-5266(03)00060-8
11. Dixon R, Achnine L, Kota P, Lui C, Reddy M, Wang L (2002) The phenylpropanoid pathway and plant defence - a genomics perspective. Molecular Plant Pathology 3, 371-390. doi: 10.1046/j.1364-3703.2002.00131.x
12. Dowd C, Wilson I, McFadden H (2004) Gene expression profile changes in cotton root and hypocotyl tissues in response to infection with Fusarium oxysporum f. sp. vasinfectum. Molecular Plant-Microbe Interactions 17, 654-667.
13. Food and Agriculture Organization (2006) FAO Statistical databases - agricultural production. Available at http://faostat.fao.org/site/567/ default.aspx [Verified 2 January 2007]
14. Grant M, Mansfield J (1999) Early events in host-pathogen interactions. Current Opinion in Plant Biology 2, 312-319. doi: 10.1016/S1369-5266(99)80055-7
15. Greenberg J (1997) Programmed cell death in plant-pathogen interactions. Annual Review of Plant Physiology and Plant Molecular Biology 48, 525-545. doi: 10.1146/annurev.arplant.48.1.525
16. Jalali B, Bhargava S, Kamble A (2006) Signal transduction and transcriptional regulation of plant defence responses. Journal of Phytopathology 154, 65-74. doi: 10.1111/j.1439-0434.2006.01073.x
17. Lamb C, Dixon R (1997) The oxidative burst in plant disease response. Annual Review of Plant Physiology and Plant Molecular Biology 48, 251-275. doi: 10.1146/annurev.arplant.48.1.251
18. Lopez C, Soto M, Restrepo S, Piegu B, Cooke R, Delseny M, Tohme J, Verdier V (2005) Gene expression profile in response to Xanthomonas axonopodis pv. manihotis in cassava using a cDNA microarray. Plant Molecular Biology 57, 393-410. doi: 10.1007/s11103-004-7819-3
19. Mewes H, Frishman D, Guldener U, Mannhaupt G, Mayer K, Mokrejs M, Morgenstern B, Munste M, Rudd S, Weil B (2002) MIPS: a database for genomes and protein sequences. Nucleic Acids Research 30, 31-34. doi: 10.1093/nar/30.1.31
20. Neill S, Desikan R, Hancock J (2002) Hydrogen peroxide signalling. Current Opinion in Plant Biology 5, 388-395. doi: 10.1016/S1369-5266(02)00282-0
21. Nene Y (1982) A review of ascochyta blight of chickpea. Tropical Pest Management 28, 61-70.
22. Pena-Cortez H, Albreht T, Prat S, Water E, Willmitzer L (1998) Aspirin prevents wound-induced gene expression in tomato leaves by blocking jasmonic acid biosynthesis. Planta 104, 123-128.
23. Reddy A (2001) Calcium: silver bullet in signaling. Plant Science 160, 381-404. doi: 10.1016/S0168-9452(00)00386-1
24. Salzman R, Brady J, Finlayson S, Buchanan C, Summer E et al. (2005) Transcriptional profiling of sorghum induced by methyl jasmonate, salicylic acid, and aminocyclopropane carboxylic acid reveals cooperative regulation and novel gene responses. Plant Physiology 138, 352-368. doi: 10.1104/pp.104.058206
25. Schenk P, Kazan K, Wilson I, Anderson J, Richmond T, Somerville S, Manners J (2000) Coordinated plant defense responses in Arabidopsis revealed by microarray analysis. Proceedings of the National Academy of Sciences USA 97, 11655-11660. doi: 10.1073/pnas.97.21.11655
26. Skiba B, Ford R, Pang E (2005) Construction of a cDNA library of Lathyrus sativus inoculated with Mycosphaerella pinodes and the expression of potential defence-related expressed sequence tags (ESTs). Physiological and Molecular Plant Pathology 66, 55-67. doi: 10.1016/j.pmpp.2005.04.005
27. Thaler J, Bostock R (2004) interactions between abscisic-acid-mediated responses and plants resistant to pathogen and insects. Ecology 85, 48-58.
28. Thatcher LF, Anderson JP, Singh KB (2005) Plant defence responses: what have we learnt from Arabidopsis? Functional Plant Biology 32, 1-19. doi: 10.1071/FP04135
29. Van Loon L, Van Strien E (1999) The families of pathogenesis-related proteins, their activities, and comparative analysis of PR-1 type proteins. Physiological and Molecular Plant Pathology 55, 85-97. doi: 10.1006/pmpp.1999.0213
30. Van Zhong G, Burns J (2003) Profiling ethylene-regulated gene expression in Arabidopsis thaliana by microarray analysis. Plant Molecular Biology 53, 117-131. doi: 10.1023/B:PLAN.0000009270.81977.ef
31. Wang K, Li H, Ecker J (2002) Ethylene biosynthesis and signaling networks. The Plant Cell 14, 153-164.