Determination of self-incompatibility genotypes of Korean apple cultivars based on S-RNase PCR

Journal of Plant Biology

Volumn 49, Issue 6, 2006, Pages 448-454

  Hoy, Taek Kim ^a   Hattori, Gen ^b   Hirata, Yutaka ^b   Dae, Kim Ill ^c   Jeong, Hwan Hwang ^c   Yong, Uk Shin ^c   Ill, Sup Nou ^d  

^a CHIBA UNIVERSITY   (Japan)

^b TOKYO UNIVERSITY OF AGRICULTURE AND TECHNOLOGY   (Japan)

^c National Institute of Animal Science   (South Korea)

^d Sunchon National University   (South Korea)

Author keywords

Apple; Gametophytic self incompatibility; PCR; S genotype; S RNase

Indexed keywords

MALUS X DOMESTICA; POECILIA;

EID: 33846415421     PISSN: 12269239     EISSN: None     Source Type: Journal    
DOI: 10.1007/BF03031125     Document Type: Article

References (36)

1. Bošković R, Tobutt KR (1999) Correlation of stylar ribonuclease isoenzymes with incompatibility alleles in apple. Euphytica 107: 29-43
2. Broothaerts W (2003) New findings in apple S-genotype analysis resolve previous confusion and request the re-numbering of some S-alleles. Theor Appl Genet 106: 703-714
3. Broothaerts W, Janssens GA, Proost P, Broekaert WF (1995) cDNA cloning and molecular analysis of two self-incompatibility alleles from apple. Plant Mol Biol 27: 499-511
4. Broothaerts W, Wiersma PA, Lane WD (2001) Multiplex PCR combining transgene and S-allele control primers to simultaneously confirm cultivar identity and transformation in apple. Plant Cell Rep 20: 349-353
5. de Nettancourt D (2001) Incompatibility and Incongruity in Wild and Cultivated Plants. Ed 2, Springer, Berlin
6. Ishimizu T, Inoue K, Shimonaka M, Saito T, Terai O, Norioka S (1999) PCR-based method for identifying the S-genotypes of Japanese pear cultivars. Theor Appl Genet 98: 961-967
7. Janssens CA, Goderis IJ, Broekaert WF, Broothaerts W (1995) A molecular method for S-allele identification in apple based on allele-specific PCR. Theor Appl Genet 91: 691-698
8. Kim HT, Hirata Y, Lee IH, Cho KS, Kim YK, Kang SS, Kim MS, Son DS, Koh GC, Nou IS (2004a) PCR-RFLP screening of intergeneric hybrid between pear (Pyrus sp.) and apple (Malus sp.). Kor J Breed 36: 330-337
9. Kim HT, Hirata Y, Shin YU, Hwang HS, Hwang JH, Sin IS, Kim DI, Kang SJ, Kim HJ, Shin DY, Nou IS (2004b) A molecular technique for selection of self-compatible varieties of Japanese pear (Pyrus pyrifolia Nakai). Euphytica 138: 73-80
10. Kim JH, Yang DH, Kim JS, Baek MH, Park YM, Wi SG, Cho JY, Chung BY (2006) Cloning, characterization, and expression of two cDNA clones for a rice ferulate-5-hydroxylase gene, a cytochrome P450-dependent monooxygenase. J Plant Biol 49: 200-204
11. Kim MH, Shin DI, Park HS, Kim DU, Chung IK (1999) Analysis of the tissue-specific S RNase gene promoter associated with self-incompatibility in tomato (Lycopersicon peruvianum L.). J Plant Biol 42: 194-198
12. 10 cDNA from Mclntosh apple and a PCR-digestion identification method. HortScience 37: 187-190
13. 25-allele identification method. J Hortic Sci Biotechnol 77: 724-728
14. Kitahara K, Soejima J, Komatsu H, Fukui H, Matsumoto S (2000) Complete sequences of the S-genes 'Sd-' and 'Sh-RNase' cDNA in apple. HortScience 35: 712-715
15. Kobel F, Steinegger P, Anliker J (1939) Weitere Untersuchungen uber die Befruchtungsverhaltnisse der Apfel- und Birnsorten. Landw Jb Schweiz 53: 160-191
16. Komori S, Soejima J, Abe K, Kato H, Kotoda N, Kudo K (1999) Analyses of S-allele genotypes of 'McIntosh', 'Kitakami', 'Worcester Pearmain', etc. J Japn Soc Hort Sci 68: 94
17. Komori S, Soejima J, Abe K, Kotoda N, Kato H (2000) Analysis of S-allele genotypes and genetic diversity in the apple. Acta Hort 538: 83-86
18. 21-RNases of apple and their allele designations. Plant Biotechnol 20: 323-329
19. Matsumoto S, Hayashi S, Kitahara K, Soejima J (2001a) Genomic DNA sequence encoding Malus x domestica Borkh. "Akane", "Delicious" and Malus transitoria S-RNases. DNA Seq 12: 381-383
20. Matsumoto S, Kitahara K (2000) Discovery of a new self-incompatibility allele in apple. HortScience 35: 1329-1332
21. Matsumoto S, Kitahara K, Komatsu H, Soejima J (2001b) A functional S-allele, 'Sg', in the wild apple possessing a single amino acid, S-RNase 'Sg'-RNase', different from 'Sg-RNase' in Malus x domestica cultivars. J Hortic Sci Biotechnol 76: 163-166
22. Matsumoto S, Kitahara K, Komori S, Soejima J (1999a) A new S-allele in apple, 'Sg', and its similarity to the 'Sf' allele from Fuji. HortScience 34: 708-710
23. Matsumoto S, Komori S, Kitahara K, Imasu S, Soejima J (1999b) S-genotypes of 15 apple cultivars and self-compatibility of 'Megumi'. J Japn Soc Hort Sci 68: 236-241
24. 5-RNase' in the Japanese pear. Plant Physiol 122: 620
25. McClure BA, Haring V, Ebert PR, Anderson MA, Simpson RJ, Sakiyama F, Clarke AE (1989) Style self-incompatibility gene products of Nicotiana alata are ribonucleases. Nature 342: 955-957
26. Sakurai K, Brown SK, Weeden NF (1997) Determining the self-incompatibility alleles of Japanese apple cultivars. HortScience 32: 1258-1259
27. Sakurai K, Brown SK, Weeden NF (2000) Self-incompatibility alleles of apple cultivars and advanced selections. HortScience 35: 116-119
28. Sassa H, Mase N, Hirano H, Ikehashi H (1994) Identification of self-incompatibility related glycoproteins in styles of apple (Malus x domestica). Theor Appl Genet 89: 201-205
29. Sassa H, Nishio T, Kowyama Y, Hirano T, Koba T, Ikehashi H (1996) Self-incompatibility (S) alleles of the Rosaceae encode members of a distinct class of the T2/S ribonuclease superfamily. Mol Gen Genet 250: 547-557
30. Schneider D, Stern RA, Eisikowitch D, Goldway M (2001) Analysis of S-alleles by PCR for determination of compatibility in the Red Delicious apple orchard. J Hortic Sci Biotech 76: 596-600
31. Tamura M, Ushijima K, Sassa H, Hirano H, Tao R, Gradziel TM, Dandekar AM (2000) Identification of self-incompatibility genotypes of almond by allele-specific PCR analysis. Theor Appl Genet 101: 344-349
32. Tateishi A, Inoue H, Shiba H, Yamaki S (2002) Cloning and expression of β-galactosidase cDNA related to softening of avocado (Persea americana). J Japn Soc Hort Sci 71: 48-55
33. Ushijima K, Sassa H, Dandekar AM, Gradziel TM, Tao R, Hirano H (2003) Structural and transcriptional analysis of the self-incompatibility (S) locus of almond (Prunus dulcis): Identification of a pollen-expressed F-box gene with haplotype-specific polymorphism. Plant Cell 15: 771-781
34. van Nerum I, Geerts M, van Haute A, Keulemans J, Broothaerts W (2001) Re-examination of the self-incompatibility genotype of apple cultivars containing putative 'new' S-alleles. Theor Appl Genet 103: 584-591
35. Verdoodt L, van Haute A, Goderis IJ, de Witte K, Keulemans J, Broothaerts W (1998) Use of the multi-allelic self-incompatibility gene in apple to assess homozygosity in shoots obtained through haploid induction. Theor Appl Genet 96: 294-300
36. Yamane H, Ikeda K, Ushijima K, Sassa H, Tao R (2003) A pollen-expressed gene for a novel protein with an F-box motif that is very tightly linked to a gene for S-RNase in two species of cherry, Prunus cerasus and P. avium. Plant Cell Physiol 44: 764-769