Genetic diversity analysis in Gaultheria fragrantissima Wall. (Ericaceae) from the two biodiversity hotspots in India using ISSR markers

Current Science

Volumn 91, Issue 12, 2006, Pages 1634-1640

  Apte, G S ^a   Bahulikar, R A ^b   Kulkarni, R S ^a   Lagu, M D ^a   Kulkarni, B G ^c   Suresh, H S ^d   Rao, P S N ^c   Gupta, V S ^a  

^a NATIONAL CHEMICAL LABORATORY   (India)

^b UNIVERSITY OF KONSTANZ   (Germany)

^c BOTANICAL SURVEY OF INDIA   (India)

^d INDIAN INSTITUTE OF SCIENCE   (India)

Author keywords

Gaultheria fragrantissima; Genetic diversity; Heterozygosity; ISSR markers

Indexed keywords

ERICACEAE; GAULTHERIA;

EID: 33846279379     PISSN: 00113891     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (44)

1. Schaal, B. A., Hayworth, D. A., Olsen, K. M., Rauscher, J. T. and Smith, W. A., Phylogeographic studies in plants: problems and prospects. Mol. Ecol., 1998, 7, 465-467.
2. Slatkin, M., Gene flow and the geographic structure of natural populations. Science, 1987, 236, 787-792.
3. Bartlett, I., Novak, S. J. and Mack, R. N., Genetic variation in Bromus tectorum (Poaceae): Differentiation in the Eastern United States. Am. J. Bot., 2002, 89, 602-612.
4. Wolf, A. T., Howe, R. W. and Hamrick, J. L., Genetic diversity and population structure of the serpentine endemic Calystegia collina (Convolvulaceae) in northern California. Am. J. Bot., 2000, 87, 1138-1146.
5. Pappert, R. A., Hamrick, J. L. and Donovan, L. A., Genetic variation in Pueraria lobata (Fabaceae), an introduced, clonal, invasive plant of the southeastern United States. Am. J. Bot., 2000, 87, 1240-1245.
6. Muller-Scha Rer, H. and Fischer, M., Genetic structure of the animal weed Senecio vulgaris in relation to habitat type and population size. Mol. Ecol., 2001, 10, 17-28.
7. Sales, E., Nebaure, S. G., Mus, M. and Segura, J., Population genetic study in the Balearic endemic plant species Digitalis minor (Scrophulariaceae) using RAPD markers. Am. J. Bot., 2001, 88, 1750-1759.
8. Lacerda, D. R., Acedo, M. D. P., Lemos Filho, J. P. and Lavota, M. B., Genetic diversity and structure of natural populations of Plathymenia reticulata (Mimosoideae), a tropical tree from the Brazilian Cerrado. Am. J. Bot., 2001, 10, 1143-1157.
9. Joshi, S. P., Gupta, V. S., Aggarwal, R. K., Ranjekar, P. K. and Brar, D. S., Genetic diversity and phylogenetic relationships as revealed by intersimple sequence repeat (ISSR) polymorphism in the genus Oryza. Theor. Appl. Genet., 2000, 100, 1311-1320.
10. Brantestam, A. K., Bothmer, R. V., Dayteg, C., Rashal, I., Tuvesson, S. and Weibull, J., Inter simple sequence repeat analysis of genetic diversity and relationships in cultivated barley of Nordic and Baltic origin. Hereditas, 2004, 141, 186-192.
11. Pissard, A., Ghislain, M. and Bertin, P., Genetic diversity of the Andean tuber-bearing species, oca (Oxalis tuberosa Mol.), investigated by inter-simple sequence repeats. Genome, 2006, 49, 8-16.
12. Nan, P., Shi, S., Peng, S., Tian, C. and Zhong, Y., Genetic diversity in Primula obconica (Primulaceae) from central and south-west China as revealed by ISSR markers. Ann. Bot., 2003, 91, 329-333.
13. Xie, G. W., Wang, D. L., Yuan, Y. M. and Ge, X. J., Population genetic structure of Monimopetalum chinense (Celastraceae), an endangered endemic species of eastern China. Ann. Bot., 2005, 95, 773-777.
14. Ge, X. J., Yu, Y., Yuan, Y. M., Huang, H. W. and Yan, C., Genetic diversity and geographic differentiation in endangered Ammopiptanthus (Leguminosae) populations in desert regions of northwest China as revealed by ISSR analysis. Ann. Bot., 2005, 95, 843-851.
15. Deshpande, A. U. et al., Genetic diversity across the natural populations of three montane plant species from the WG, India revealed by ISSR repeats. Mol. Ecol., 2001, 10, 2397-2408.
16. Wolfe, A. D., Xiang, Q. and Kephart, S. R., Assessing hybridization in natural populations of Penstemon (Scrophuariaceae) using hypervariable intersimple sequence repeat (ISSR) basis. Mol. Ecol., 1998, 7, 1107-1125.
17. Meher-Homji, V. M., On the montane species of Kodaikanal, South India. Phytocoenologia, 1975, 2, 28-39.
18. Chopra, R. N., The Medicinal and Economic Aspects of Some Indian Medicinal Plants, Patna University Press, Patna, 1932, pp. 174-177.
19. Meher-Homji, V. M., Himalayan plants of South Indian hills: role of pleistocene glaciation vs. long distance dispersal. Sci. Cult., 1972, 38, 8-12.
20. Burkill, J. H., The botany of the Abor expedition. In Records of the Botanical Survey of India, 1924, vol. 10, p. 420.
21. Blasco, F., Orophytes of South India and Himalayas. J. Indian Bot. Soc., 1971, 50, 377-381.
22. Nybom, H. and Bartish, I. V., Effects of life history traits and sampling strategies on genetic diversity estimates obtained with RAPD markers in plants. Perspect. Plant Ecol. Evol. Syst., 2000, 3, 93-114.
23. Lynch, M. and Milligan, B. G., Analysis of population genetic structure with RAPD markers. Mol. Ecol., 1994, 3, 91-99.
24. Nei, M., Analysis of gene diversity in subdivided populations. Proc. Natl. Acad. Sci. USA, 1973, 70, 3321-3323.
25. Nei, M., F-Statistics and analysis of gene diversity in sub-divided populations. Ann. Hum. Genet., 1977, 41, 225-233.
26. Wright, S., Evolution in Mendelian populations. Genetics, 1931, 16, 97-159.
27. Yap, I. V. and Nelson, R. J., Winboot: A program for performing bootstrap analysis for binary data to determine the confidence limits of UPGMA-based dendrograms. In International Rice Research Institute: Discussion paper series number 14, 1996.
28. Excoffier, L., Smouse, P. E. and Quattro, J. M., Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics, 1992, 131, 479-491.
29. Rohlf, F. J., NTSYS-pc Numerical Taxonomy and Multivariate Analysis System, Exeter Publishing Company Ltd, Setauket, 1989.
30. Mantel, N. A., The detection of disease clustering and a generalized regression approach. Cancer Res., 1967, 27, 209-220.
31. Myres, N., Mittermeier, R. A., Mittermeier, C. G., da Fonseca, G. A. B. and Kent, J., Biodiversity hotspots for conservation priorities. Nature, 2000, 403, 853-858.
32. Hajra, P. K. and Mudgal, V. (eds), In Plant Diversity Hotspots in India, an Overview, Botanical Survey of India, Calcutta, India, 1997.
33. Frankel, O. H., Brown, A. H. D. and Burdon, J. J. (eds), In The Conservation of Plant Biodiversity, Cambridge University Press, New York, USA, 1995.
34. Loveless, M. D. and Hamrick, J. L., Ecological determinants of genetic structure in plant populations. Annu. Rev. Ecol. Syst., 1984, 15, 65-95.
35. Hamrick, J. L. and Godt, M. J. W., Allozymes diversity in plant species. In Plant Population Genetics (eds Brown A. H. D. et al.), Breeding and Genetic Resources, Sinauer, Sunderland, Massachusetts, USA, 1989, pp. 43-63.
36. Heywood, J. S., Spatial analysis of genetic variation in plant populations. Annu. Rev. Ecol. Syst., 1991, 22, 335-355.
37. Nebauer, S. G., Del Castillo Agudo, L. and Segura, J., RAPD variation within and among natural populations of outcrossing willow-leaved foxglove (Digitalis obscura L.). Theor. Appl. Genet., 1999, 98, 985-994.
38. Hamrick, J. L. and Godt, M. J. W., Effects of life history traits on genetic diversity in plant species. Philos. Trans. R. Soc. London, Ser. B, 1996, 351, 1291-1298.
39. Rossetto, M., Weaver, P. K. and Dixan, K. W., Use of RAPD analysis in devising conservation strategies for the rare and endangered Grevillea scapigerea (Proteaceae). Mol. Ecol., 1995, 4, 321-329.
40. Chase, M. R., Boshier, D. H. and Bawa, K. S., Population genetics of Cordia alliodora (Boraginaceae), a neotropical tree. 1. Genetic variation in natural populations. Am. J. Bot., 1995, 82, 468-475.
41. Levin, D. A., Immigration in plants: an exercise in the subjunctive. In Perspectives on Plant Population Biology (eds Dirzo, R. and Sarukhan, J.), Sinauer, Sunderland, 1984, pp. 242-260.
42. Slatkin, M., Rare alleles as indicators of gene flow. Evolution, 1985, 39, 53-65.
43. Young, A., Boyle, T. and Brown, T., The population genetic consequences of habitat fragmentation for plant. Trends Ecol. Evol., 1996, 11, 413-418
44. Fischer, M. and Matthies, D., Effects of population size on performance in the rare plant Genetionella germanica. J. Ecol., 1998, 86, 195-204.