In vitro embryonic developmental phosphorylation of the cellular nucleic acid binding protein by cAMP-dependent protein kinase, and its relevance for biochemical activities

FEBS Journal

Volumn 274, Issue 2, 2007, Pages 485-497

  Lombardo, Verónica A ^a   Armas, Pablo ^a   Weiner, Andrea M J ^a   Calcaterra, Nora B ^a  

^a UNIVERSIDAD NACIONAL DE ROSARIO   (Argentina)

Author keywords

CNBP; Danio rerio; Embryogenesis; Phosphorylation; PKA

Indexed keywords

AMINO ACID; CYCLIC AMP DEPENDENT PROTEIN KINASE; NUCLEIC ACID BINDING PROTEIN;

ANIMAL CELL; ARTICLE; CONTROLLED STUDY; DANIO RERIO; DEVELOPMENTAL STAGE; EMBRYO; EMBRYO DEVELOPMENT; FERTILIZATION; GENE EXPRESSION; MUTAGENESIS; NONHUMAN; NUCLEOTIDE SEQUENCE; ONCOGENE C MYC; PRIORITY JOURNAL; PROTEIN PHOSPHORYLATION; ZEBRA FISH;

AMINO ACID SEQUENCE; ANIMALS; CYCLIC AMP-DEPENDENT PROTEIN KINASES; GENE EXPRESSION REGULATION, DEVELOPMENTAL; MOLECULAR SEQUENCE DATA; PHOSPHORYLATION; PROMOTER REGIONS (GENETICS); RNA-BINDING PROTEINS; SEQUENCE HOMOLOGY, AMINO ACID; SERINE; THREONINE; TRANS-ACTIVATION (GENETICS); TRANSCRIPTION, GENETIC; ZEBRAFISH; ZEBRAFISH PROTEINS;

DANIO RERIO; VERTEBRATA;

EID: 33846023322     PISSN: 1742464X     EISSN: 17424658     Source Type: Journal    
DOI: 10.1111/j.1742-4658.2006.05596.x     Document Type: Article

References (47)

1. Armas P, Cabada MO & Calcaterra NB (2001) Primary structure and developmental expression of Bufo arenarum cellular nucleic acid-binding protein: changes in subcellular localization during early embryogenesis. Dev Growth Differ 43, 13-23.
2. Chen W, Liang Y, Deng W, Shimizu K, Ashique AM, Li E & Li YP (2003) The zinc-finger protein CNBP is required for forebrain formation in the mouse. Development 130, 1367-1379.
3. Abe Y, Chen W, Huang W, Nishino M & Li YP (2006) CNBP regulates forebrain formation at organogenesis stage in chick embryos. Dev Biol 295, 116-127.
4. Rajavashisth TB, Taylor AK, Andalibi A, Svenson KL & Lusis AJ (1989) Identification of a zinc finger protein that binds to the sterol regulatory element. Science 245, 640-643.
5. Liu M, Kumar KU, Pater MM & Pater A (1998) Identification and characterization of a JC virus pentanucleotide repeat element binding protein: cellular nucleic acid binding protein. Virus Res 58, 73-82.
6. Flink IL & Morkin E (1995) Alternatively processed isoforms of cellular nucleic acid-binding protein interact with a suppressor region of the human beta-myosin heavy chain gene. J Biol Chem 270, 6959-6965.
7. Michelotti EF, Tomonaga T, Krutzsch H & Levens D (1995) Cellular nucleic acid binding protein regulates the CT element of the human c-myc protooncogene. J Biol Chem 270, 9494-9499.
8. Konicek BW, Xia X, Rajavashisth T & Harrington MA (1998) Regulation of mouse colony-stimulating factor-1 gene promoter activity by AP1 and cellular nucleic acid-binding protein. DNA Cell Biol 17, 799-809.
9. Pellizzoni L, Lotti F, Maras B & Pierandrei-Amaldi P (1997) Cellular nucleic acid binding protein binds a conserved region of the 5′ UTR of Xenopus laevis ribosomal protein mRNAs. J Mol Biol 267, 264-275.
10. Armas P, Cachero S, Lombardo VA, Weiner A, Allende ML & Calcaterra NB (2004) Zebrafish cellular nucleic acid-binding protein: gene structure and developmental behaviour. Gene 337, 151-161.
11. Calcaterra NB, Palatnik JF, Bustos DM, Arranz SE & Cabada MO (1999) Identification of mRNA-binding proteins during development: characterization of Bufo arenarum cellular nucleic acid binding protein. Dev Growth Differ 41, 183-191.
12. Yasuda J, Mashiyama S, Makino R, Ohyama S, Sekiya T & Hayashi K (1995) Cloning and characterization of rat cellular nucleic acid binding protein (CNBP) cDNA. DNA Res 2, 45-49.
13. Tomonaga T, Michelotti GA, Libutti D, Uy A, Sauer B & Levens D (1998) Unrestraining genetic processes with a protein-DNA hinge. Mol Cell 1, 759-764.
14. Pellizzoni L, Lotti F, Rutjes SA & Pierandrei-Amaldi P (1998) Involvement of the Xenopus laevis Ro60 autoantigen in the alternative interaction of La and CNBP proteins with the 5′ UTR of L4 ribosomal protein mRNA. J Mol Biol 281, 593-608.
15. Flink IL & Morkin E (1995) Organization of the gene encoding cellular nucleic acid-binding protein. Gene 163, 279-282.
16. Shimizu K, Chen W, Ashique AM, Moroi R & Li YP (2003) Molecular cloning, developmental expression, promoter analysis and functional characterization of the mouse CNBP gene. Gene 307, 51-62.
17. Warden CH, Krisans SK, Purcell-Huynh D, Leete LM, Daluiski A, Diep A, Taylor BA & Lusis AJ (1994) Mouse cellular nucleic acid binding proteins: a highly conserved family identified by genetic mapping and sequencing. Genomics 24, 14-19.
18. Ruble DM & Foster DN (1998) Molecular cloning and characterization of a highly conserved chicken cellular nucleic acid binding protein cDNA. Gene 218, 95-101.
19. van Heumen WR, Claxton C & Pickles JO (1997) Sequence and tissue distribution of chicken cellular nucleic acid binding protein cDNA. Comp Biochem Physiol B Biochem Mol Biol 118, 659-665.
20. De Dominicis A, Lotti F, Pierandrei-Amaldi P & Cardinali B (2000) cDNA cloning and developmental expression of cellular nucleic acid-binding protein (CNBP) gene in Xenopus laevis. Gene 241, 35-43.
21. Flink IL, Blitz I & Morkin E (1998) Characterization of cellular nucleic acid binding protein from Xenopus laevis: expression in all three germ layers during early development. Dev Dyn 211, 123-130.
22. Liu JX & Gui JF (2005) Expression pattern and developmental behaviour of cellular nucleic acid-binding protein (CNBP) during folliculogenesis and oogenesis in fish. Gene 356, 181-192.
23. Gattiker A, Gasteiger E & Bairoch A (2002) ScanProsite: a reference implementation of a PROSITE scanning tool. Appl Bioinformatics 1, 107-108.
24. Blom N, Gammeltoft S & Brunak S (1999) Sequence and structure-based prediction of eukaryotic protein phosphorylation sites. J Mol Biol 294, 1351-1362.
25. Obenauer JC, Cantley LC & Yaffe MB (2003) Scansite 2.0: Proteome-wide prediction of cell signaling interactions using short sequence motifs. Nucleic Acids Res 31, 3635-3641.
26. Xue Y, Zhou F, Zhu M, Ahmed K, Chen G & Yao X (2005) GPS: a comprehensive www server for phosphorylation sites prediction. Nucleic Acids Res 33, W184-W187.
27. Kim JH, Lee J, Oh B, Kimm K & Koh I (2004) Prediction of phosphorylation sites using SVMs. Bioinformatics 20, 3179-3184.
28. Dasgupta JD & Garbers DL (1983) Tyrosine protein kinase activity during embryogenesis. J Biol Chem 258, 6174-6178.
29. Antonelli M, Daniotti JL, Rojo D, Allende CC & Allende JE (1996) Cloning, expression and properties of the alpha′ subunit of casein kinase 2 from zebrafish (Danio rerio). Eur J Biochem 241, 272-279.
30. O'Farrell F, Loog M, Janson IM & Ek P (1999) Kinetic study of the inhibition of CK2 by heparin fragments of different length. Biochim Biophys Acta 1433, 68-75.
31. Wu KJ, Mattioli M, Morse HC III & Dalla-Favera R (2002) c-MYC activates protein kinase A (PKA) by direct transcriptional activation of the PKA catalytic subunit beta (PKA-Cbeta) gene. Oncogene 21, 7872-7882.
32. 2+ fingers support replication of human immunodeficiency virus type 1 when they are substituted in the nucleocapsid protein. J Virol 77, 8524-8531.
33. Lapadat-Tapolsky M, Pernelle C, Borie C & Darlix JL (1995) Analysis of the nucleic acid annealing activities of nucleocapsid protein from HIV-1. Nucleic Acids Res 23, 2434-2441.
34. Rein A, Henderson LE & Levin JG (1998) Nucleic-acid-chaperone activity of retroviral nucleocapsid proteins: significance for viral replication. Trends Biochem Sci 23, 297-301.
35. Munroe SH & Dong XF (1992) Heterogeneous nuclear ribonucleoprotein A1 catalyzes RNA.RNA annealing. Proc Natl Acad Sci USA 89, 895-899.
36. Pontius BW & Berg P (1990) Renaturation of complementary DNA strands mediated by purified mammalian heterogeneous nuclear ribonucleoprotein A1 protein: implications for a mechanism for rapid molecular assembly. Proc Natl Acad Sci USA 87, 8403-8407.
37. Cobianchi F, Calvio C, Stoppini M, Buvoli M & Riva S (1993) Phosphorylation of human hnRNP protein A1 abrogates in vitro strand annealing activity. Nucleic Acids Res 21, 949-955.
38. Schwartz EI, Intine RV & Maraia RJ (2004) CK2 is responsible for phosphorylation of human La protein serine-366 and can modulate rpL37 5′-terminal oligopyrimidine mRNA metabolism. Mol Cell Biol 24, 9580-9591.
39. Michelotti GA, Michelotti EF, Pullner A, Duncan RC, Eick D & Levens D (1996) Multiple single-stranded cis elements are associated with activated chromatin of the human c-myc gene in vivo. Mol Cell Biol 16, 2656-2669.
40. Davis AC, Wims M, Spotts GD, Hann SR & Bradley A (1993) A null c-myc mutation causes lethality before 10.5 days of gestation in homozygotes and reduced fertility in heterozygous female mice. Genes Dev 7, 671-682.
41. Bellmeyer A, Krase J, Lindgren J & LaBonne C (2003) The protooncogene c-myc is an essential regulator of neural crest formation in Xenopus. Dev Cell 4, 827-839.
42. Eisenman RN (2001) Deconstructing myc. Genes Dev 15, 2023-2030.
43. Grandori C, Cowley SM, James LP & Eisenman RN (2000) The Myc /Max/Mad network and the transcriptional control of cell behavior. Annu Rev Cell Dev Biol 16, 653-699.
44. Westerfield M (2005) The Zebrafish Book. Guide for the Laboratory Use of Zebrafish (Danio Rerio) 3rd edn. University of Oregon Press, Eugene, OR.
45. Kimmel CB, Ballard WW, Kimmel SR, Ullmann B & Schilling TF (1995) Stages of embryonic development of the zebrafish. Dev Dyn 203, 253-310.
46. Sedmak JJ & Grossberg SE (1977) A rapid, sensitive, and versatile assay for protein using Coomassie brilliant blue G250. Anal Biochem 79, 544-552.
47. Heath MJ, Derebail SS, Gorelick RJ & DeStefano JJ (2003) Differing roles of the N- and C-terminal zinc fingers in human immunodeficiency virus nucleocapsid protein-enhanced nucleic acid annealing. J Biol Chem 278, 30755-30763.