Cellular nucleic acid binding protein binds a conserved region of the 5' UTR of Xenopus laevis ribosomal protein mRNAs

Journal of Molecular Biology

Volumn 267, Issue 2, 1997, Pages 264-275

  Pellizzoni, Livio ^a   Lotti, Francesco ^a   Maras, Bruno ^b   Pierandrei Amaldi, Paola ^a  

^a CNR   (Italy)

^b SAPIENZA UNIVERSITY OF ROME   (Italy)

Author keywords

Cellular nucleic acid binding protein; Ribosomal protein mRNA; RNA protein interaction; Translational control; Xenopus laevis

Indexed keywords

MESSENGER RNA; NUCLEIC ACID BINDING PROTEIN; PROTEINASE; PYRIMIDINE; RIBOSOME PROTEIN; RNA BINDING PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; COMPLEX FORMATION; CONTROLLED STUDY; IMMUNOPRECIPITATION; NONHUMAN; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN PURIFICATION; PROTEIN RNA BINDING; RNA STRUCTURE; RNA TRANSLATION; TRANSLATION REGULATION; XENOPUS LAEVIS;

VERTEBRATA; XENOPUS LAEVIS;

EID: 0031588899     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmbi.1996.0888     Document Type: Article

References (42)

1. Agrawal M. G., Bowman L. H. Transcriptional and translational regulation of ribosomal protein formation during mouse myoblast differentiation. J. Biol. Chem. 262:1987;4868-4875.
2. Amaldi F., Camacho-Vanegas O., Cardinali B., Cecconi F., Crosio C., Loreni F., Mariottini P., Pellizzoni L., Pierandrei-Amaldi P. Structure and expression of ribosomal protein genes in Xenopus laevis. Biochem. Cell. Biol. 73:1995;969-977.
3. Avni D., Shama S., Loreni F., Meyuhas O. Vertebrate mRNAs with a 5′-terminal pyrimidine tract are candidates for translational repression in quiescent cells. Characterization of the translational cis -regulatory element (TLRE). Mol. Cell. Biol. 14:1994;3822-3833.
4. Bagni C., Mariottini P., Terrenato L., Amaldi F. Individual variability in the translational regulation of ribosomal protein synthesis in Xenopus. Mol. Gen. Genet. 234:1992;60-64.
5. Berg J. M. Potential metal-binding domains in nucleic acid binding proteins. Science. 232:1986;485-487.
6. Cardinali B., Di Cristina M., Pierandrei-Amaldi P. Interaction of proteins with the mRNA for ribosomal protein L1 in Xenopus: structural characterization ofin vivo complexes and identification of proteins that bind in vitro to its 5′ UTR. Nucl. Acids Res. 21:1993;2301-2308.
7. Cleveland D. W., Fischer S. G., Kirschner M. W., Laemli U. K. Peptide mapping by limited proteolysis in sodium dodecyl sulfate and analysis by gel electrophoresis. J. Biol. Chem. 252:1977;1102-1106.
8. Dignam J. D., Lebovitz R. M., Roeder R. G. Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei. Nucl. Acids Res. 11:1983;1475-1489.
9. Flink I. L., Morkin E. Alternatively processed isoforms of cellular nucleic acid binding protein interact with a supressor region of the human β-myosin heavy chain gene. J. Biol. Chem. 270:1995a;6959-6565.
10. Flink, I. L. Morkin, E. 1995b, GenBank accession no. U20977.
11. Geyer P. K., Meyuhas O., Perry R. P., Johnson L. F. Regulation of ribosomal protein mRNA content and translation in growth-stimulated mouse fibroblasts. Mol. Cell. Biol. 2:1982;685-693.
12. Gray N. K., Hentze M. W. Iron regulatory protein prevents binding of the 43S translation pre-initiation complex to ferritin and eALAS mRNAs. EMBO J. 13:1994;3882-3891.
13. Hammond M. L., Merrick W., Bowman L. H. Sequences mediating the translation of mouse S16 ribosomal protein mRNA during myoblast differentiation and in vitro and possible control points for the in vitro translation. Genes Dev. 5:1991;1723-1736.
14. Harland R., Misher L. Stability of RNA in developing Xenopus embryos and identification of a destabilizing sequence in TFIIIA messenger RNA. Development. 102:1988;837-852.
15. Jefferies H. B. J., Reinhard C., Kozma S. C., Thomas G. Rapamycin selectively represses translation of the "polypyrimidine tract" mRNA family. Proc. Natl Acad. Sci. USA. 91:1994;4441-4445.
16. Kaspar R. L., Tomohito K., Cranston H., Morris D. R., White M. W. A regulatory cis element and a specific binding factor involved in the mitogenic control of murine ribosomal protein L32 translation. J. Biol. Chem. 267:1992;508-514.
17. Levy S., Avni D., Hariharan N., Perry R. P., Meyuhas O. Oligopyrimidine tract at the 5′ end of mammalian ribosomal protein mRNAs is required for their translational control. Proc. Natl Acad. Sci. USA. 88:1991;3319-3323.
18. Loreni F., Amaldi F. Translational regulation of ribosomal protein synthesis in Xenopus cultured cells: mRNA relocation between polysomes and RNP during nutritional shift. Eur. J. Biochem. 205:1992;1027-1032.
19. Loreni F., Francesconi A., Amaldi F. Coordinate translational regulation in the synthesis of elongation factor 1α and ribosomal protein in Xenopus laevis. Nucl. Acids Res. 21:1993;4721-4725.
20. Lotti F., Pellizzoni L., De Dominicis A., Pierandrei-Amaldi P. EMBLbank accession no. Y07751. 1996.
21. Mariottini P., Amaldi F. The 5′ untranslated region of mRNA for ribosomal protein S19 is involved in its translational regulation duringXenopus development. Mol. Cell. Biol. 10:1989;816-822.
22. Mariottini P., Bagni C., Annesi F., Amaldi F. Isolation and nucleotide sequences of cDNA for Xenopus laevis ribosomal protein S8: similarities in the 5′ and 3′ untranslated regions of mRNAs for various r-proteins. Gene. 67:1988;69-74.
23. Meerovitch K., Svitkin Y. V., Lee H. S., Lejbkowicz F., Kenan D. J., Chan E. K. L., Agol V. I., Keene J. D., Sonenberg N. La autoantigen enhances and corrects aberrant translation of poliovirus RNA in reticolocyte lysate. J. Virol. 67:1993;3798-3807.
24. Meyuhas O., Avni D., Shama S. Translational control of ribosomal protein mRNAs in eukaryotes. Translational Control. 1996;Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
25. Michelotti E. F., Tomonaga T., Krutzsch H., Levens D. Cellular nucleic acid binding protein regulates the CT element of the human c -myc protoncogene. J. Biol. Chem. 270:1995;9494-9499.
26. Milligan J. F., Groebe D. R., Witherell G. W., Uhlenbeck O. C. Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates. Nucl. Acids Res. 15:1987;8783-8798.
27. Neupert B., Thompson N. A., Meyer C., Kuhn L. C. A high yield affinity purification method for specific RNA-binding proteins: isolation of the iron regulatory factor from human placenta. Nucl. Acids Res. 18:1990;51-55.
28. Pellizzoni L., Crosio C., Campioni N., Loreni F., Pierandrei-Amaldi P. Different forms of U15 snoRNA are encoded in the introns of the ribosomal protein S1 gene of Xenopus laevis. Nucl. Acids Res. 22:1994;4607-4613.
29. Pellizzoni L., Cardinali B., Lin-Marq N., Mercanti D., Pierandrei-Amaldi P. A Xenopus laevis homologue of the La autoantigen binds the pyrimidine tract of the 5′ UTR of ribosomal protein mRNAs in vitro: implication of a protein factor in complex formation. J. Mol. Biol. 259:1996;904-915.
30. Pierandrei-Amaldi P., Amaldi F. Aspects of regulation of ribosomal protein synthesis in Xenopus laevis. Genetica. 94:1994;181-193.
31. Pierandrei-Amaldi P., Campioni N., Beccari E., Bozzoni I., Amaldi F. Expression of ribosomal protein genes in Xenopus laevis. Cell. 30:1982;163-171.
32. Pierandrei-Amaldi P., Beccari E., Bozzoni I., Amaldi F. Ribosomal protein production in normal and anucleolate Xenopus embryos: regulation at the post-transcriptional and translational levels. Cell. 42:1985;317-323.
33. Rajavashisth T. B., Taylor A. K., Andalibi A., Svenson K. L., Lusis A. Identification of a zinc finger protein that binds to the sterol regulatory element. Science. 245:1989;640-643.
34. Rogers S., Wells R., Rechsteiner M. Amino acid sequences common to rapidly degraded proteins: the PEST hypothesis. Science. 234:1986;364-365.
35. Shama S., Avni D., Frederickson R. M., Sonenberg N., Meyuhas O. Overexpression of initiation factor eIF-4E does not relieve the translational repression of ribosomal protein mRNA in quiescent cells. Gene Express. 4:1995;241-252.
36. Scherly D., Stutz F., Lin-Marq N., Clarkson S. G. La proteins from Xenopus laevis cDNA cloning and developmental expression. J. Mol. Biol. 231:1993;196-204.
37. L32is a RNA/DNA-binding protein which interacts with conserved elements of the murine L32 ribosomal protein mRNA. Eur. J. Biochem. 229:1995;426-432.
38. Svitkin Y. V., Pause A., Sonenberg N. La autoantigen alleviates translational repression by the 5′ leader sequence of the human immunodeficiency virus type 1 mRNA. J. Virol. 68:1994;7001-7007.
39. Terada N., Patel H. R., Takase K., Kohno K., Nairn A. C., Gelfand E. W. Rapamycin selectively inhibits translation of mRNA encoding elongation factors and ribosomal proteins. Proc. Natl Acad. Sci. USA. 91:1994;11477-11481.
40. Warden C. H., Krisans S. K., Purcell-Huynh D., Leete L. M., Daluiski A., Diep A., Taylor B. A., Lusis A. J. Mouse cellular nucleic acid binding proteins: a highly conserved family identified by genetic mapping and sequencing. Genomics. 24:1994;14-19.
41. Wool I. G., Endo Y., Chan Y. L., Gluck A. Structure, function and evolution of mammalian ribosomes. Hiel W. E., Dahlberg A., Garret R. A., Moore P. B., Schlessinger D., Warner J. R. The Ribosome: Structure, Function and Evolution. 1990;Amer. Soc. Microbiol. Press, Washington, DC.
42. Yasuda J., Mashiyama S., Makino R., Ohyama S., Sekiya T., Hayashi K. Cloning and characterization of rat cellular nucleic acid binding protein (CNBP) cDNA. DNA Res. 2:1995;45-49.