Characterization of a new thermophilic spore photoproduct lyase from Geobacillus stearothermophilus (SplG) with defined lesion containing DNA substrates

Journal of Biological Chemistry

Volumn 281, Issue 47, 2006, Pages 36317-36326

  Pieck, J Carsten ^a   Hennecke, Ulrich ^a   Pierik, Antonio J ^b   Friedel, Marcus G ^a   Carell, Thomas ^a  

^a UNIVERSITY OF MUNICH   (Germany)

^b PHILIPPS UNIVERSITY MARBURG   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSYLMETHIONINE (ADOMET); HOMODIMER; OLIGONUCLEOTIDES; THERMOPHILIC SPORE;

DNA; ELECTRON SPIN RESONANCE SPECTROSCOPY; ENZYMES; SUBSTRATES; ULTRAVIOLET SPECTROSCOPY;

BIOCHEMISTRY;

5' DEOXYADENOSINE; ADENOSINE DERIVATIVE; HOMODIMER; IRON; LYASE; OLIGONUCLEOTIDE; S ADENOSYLMETHIONINE; SULFUR; UNCLASSIFIED DRUG;

ARTICLE; BACTERIAL SPORE; CONTROLLED STUDY; ELECTRON SPIN RESONANCE; ENZYME ACTIVITY; ENZYME ANALYSIS; ENZYME DEGRADATION; ENZYME PURIFICATION; ENZYME SUBSTRATE; GEOBACILLUS STEAROTHERMOPHILUS; NONHUMAN; PRIORITY JOURNAL; QUANTITATIVE ANALYSIS; THERMOPHILIC BACTERIUM; ULTRAVIOLET SPECTROSCOPY;

BACILLACEAE; CATALYSIS; CHROMATOGRAPHY, LIQUID; DIMERIZATION; DNA; DNA REPAIR; DNA, SINGLE-STRANDED; ELECTRON SPIN RESONANCE SPECTROSCOPY; IRON-SULFUR PROTEINS; MODELS, CHEMICAL; OLIGONUCLEOTIDES; PROTEIN STRUCTURE, SECONDARY; PROTEINS; TIME FACTORS; ULTRAVIOLET RAYS;

GEOBACILLUS STEAROTHERMOPHILUS;

EID: 33845974125     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M607053200     Document Type: Article

References (46)

1. Setlow, P. (1995) Annu. Rev. Microbiol. 49, 29-54
2. Nicholson, W. L., Munakata, N., Horneck, G., Melosh, H. J., and Setlow, P. (2000) Microbiol. Mol. Biol. Rev. 64, 548-572
3. Vreeland, R. H., Rosenzweig, W. D., and Powers, D. W. (2000) Nature 407, 897-900
4. Penna, T., Ishii, M., Machoshvili, I., and Marques, M. (2002) Appl. Biochem. Biotechnol. 98, 525-538
5. Gerhardt, P., and Marquis, R. E. (1989) in Regulation of Prokaryotic Development (Smith, I., Slepecky, R. A., and Setlow, P., eds) pp. 43-63, American Society for Microbiology, Washington, D. C.
6. Devine, D. A., Keech, A. P., Wood, D. J., Killington, R. A., Boyes, H., Doubleday, B., and Marsh, P. D. (2001) J. Appl. Microbiol. 91, 786-794
7. Setlow, P. (2001) Environ. Mol. Mutagen. 38, 97-104
8. Cadet, J., Anselmino, C., Douki, T., and Voituriez, L. (1992) J. Photochem. Photobiol. 15, 277-298
9. Donnellan, J. E., and Stafford, R. S. (1968) Biophys. J. 8, 17-28
10. Douki, T., Setlow, B., and Setlow, P. (2005) Photochem. Photobiol. 81, 163-169
11. Nicholson, W. L., Setlow, B., and Setlow, P. (1991) Proc. Natl. Acad. Sci. U. S. A. 88, 8288-8292
12. Nicholson, W. L., Setlow, B., and Setlow, P. (1990) J. Bacteriol. 172, 6900-6906
13. Douki, T., Setlow, B., and Setlow, P. (2005) Photochem. Photobiol. 4, 591-597
14. Setlow, P. (1988) Comments Mol. Cell Biophys. 5, 253-264
15. Munakata, N., and Rupert, C. S. (1974) Mol. Gen. Genet. 130, 239-250
16. Nicholson, W. L., Fajardocavazos, P., Pedrazareyes, M., Sun, Y. B., and Zazuetasandoval, R. (1995) J. Cell Biochem. 19, 275-275
17. Cheek, J., and Broderick, J. B. (2002) J. Am. Chem. Soc. 124, 2860-2861
18. Rebeil, R., and Nicholson, W. L. (2001) Proc. Natl. Acad. Sci. U. S. A. 98, 9038-9043
19. Rebeil, R., Sun, Y. B., Chooback, L., Pedraza-Reyes, M., Kinsland, C., Begley, T. P., and Nicholson, W. L. (1998) J. Bacteriol. 180, 4879-4885
20. Cheek, J., and Broderick, J. B. (2001) J. Biol. Inorg. Chem. 6, 209-226
21. Mehl, R. A., and Begley, T. P. (1999) Org. Lett. 1, 1065-1066
22. Sambrock, J., and Russel, D. (2001) Molecular Cloning: A Laboratory Manual, 3rd Ed., pp. 1-125, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
23. Friedel, M. G., Berteau, O., Pieck, J. C., Atta, M., Olliagnier-de- Choudens, S., Fontecave, M., and Carell, T. (2006) Chem. Commun. 4, 445-447
24. Jackson, R. F. W., Fraser, J. L., Wishart, N., Porter, B., and Wythes, M. J. (1998) J. Chem. Soc. Perkin Trans. I 12, 1903-1912
25. Thompson, M. J., Mekhalfia, A., Hornby, D. P., and Blackburn, G. M. (1999) J. Org. Chem. 64, 7467-7473
26. Yang, M., Ye, W., and Schneller, S. W. (2004) J. Org. Chem. 69, 3993-3993
27. Douki, T., and Cadet, J. (2003) Photochem. Photobiol. Sci. 2, 433-436
28. Fischer, D. S., and Price, D. C. (1964) Clin. Chem. 10, 21-31
29. King, T. E., and Morris, R. O. (1964) Methods Enzymol. 10, 634-641
30. Doucette, P. A., Whitson, L. J., Cao, X., Schirf, V., Demeler, B., Valentine, J. S., Hansen, J. C., and Hart, P. J. (2004) J. Biol. Chem. 279, 54558-54566
31. Orme-Johnson, W. H., and Orme-Johnson, N. R. (1982) in Iron Sulfur Proteins (Spiro, T. G., ed) pp. 67-96, Wiley Interscience, New York
32. Imai, T., Taguchi, K., Ogawara, Y., Ohmori, D., Yamakura, F., Ikezawa, H., and Urushiyama, A. (2001) J. Biochem. (Tokyo) 130, 649-655
33. Ollagnier, S., Meier, C., Mulliez, E., Gaillard, J., Schuenemann, V., Trautwein, A., Mattioli, T., Lutz, M., and Fontecave, M. (1999) J. Am. Chem. Soc. 121, 6344-6350
34. Ugulava, N. B., Gibney, B. R., and Jarrett, J. T. (2000) Biochemistry 39, 5206-5214
35. Ollagnier, S., Mulliez, E., Schmidt, P. P., Eliasson, R., Gaillard, J., Deronzier, C., Bergman, T., Gräslund, A., Reichard, P., and Fontecave, M. (1997) J. Biol. Chem. 272, 24216-24223
36. Jarrett, J. T. (2005) Arch. Biochem. Biophys. 433, 312-321
37. Voegtli, W. C., Ge, J., Perlstein, D. L., Stubbe, J., and Rosenzweig, A. C. (2001) Proc. Natl. Acad. Sci. U. S. A. 98, 10073-10078
38. Berkovitch, F., Nicolet, Y., Wan, J. T., Jarrett, J. T., and Drennan, C. L. (2004) Science 303, 76-79
39. Becker, A., Fritz-Wolf, K., Kabsch, W., Knappe, J., Schultz, S., and Volker Wagner, A. F. (1999) Nat. Struct. Biol. 6, 969-975
40. Fajardo-Cavazos, P., Rebeil, R., and Nicholson, W. L. (2005) Curr. Microbiol. 51, 331-335
41. Hanzelmann, P., and Schindelin, H. (2004) Proc. Natl. Acad. Sci. U. S. A. 101, 12870-12875
42. Petrovich, R. M., Ruzicka, F. J., Reed, G. H., and Frey, P. A. (1992) Biochemistry 31, 10774-10781
43. Tamarit, J., Mulliez, E., Meier, C., Trautwein, A., and Fontecave, M. (1999) J. Biol. Chem. 274, 31291-31296
44. Jakimowicz, P., Cheesman, M. R., Bishai, W. R., Chater, K. F., Thomson, A. J., and Buttner, M. J. (2005) J. Biol. Chem. 280, 8309-8315
45. Duin, E. C., Lafferty, M. E., Crouse, B. R., Allen, R. M., Sanyal, I., Flint, D. H., and Johnson, M. K. (1997) Biochemistry 36, 11811
46. Albracht, S. P. J., and Beinert, H. (1982) Biochim. Biophys. Acta 683, 245-277