-
1
-
-
0028211009
-
PCR amplification of up to 35-kb DNA with high fidelity and high yield from λ bacteriophage templates
-
Barnes W.M. PCR amplification of up to 35-kb DNA with high fidelity and high yield from λ bacteriophage templates. Proc. Natl. Acad. Sci. USA 91 (1994) 2216-2220
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 2216-2220
-
-
Barnes, W.M.1
-
2
-
-
17044446557
-
Cloning, expression and characterization of DNA polymerase I from the hyperthermophilic archaea Thermococcus fumicolans
-
Cambon-Bonavita M.-A., Schmitt P., Zieger M., Flaman J.-M., Lesongeur F., Raguénès G., Bindel D., Frisch N., Lakkis Z., Dupret D., Barbier G., and Quérellou J. Cloning, expression and characterization of DNA polymerase I from the hyperthermophilic archaea Thermococcus fumicolans. Extremophiles 4 (2000) 215-225
-
(2000)
Extremophiles
, vol.4
, pp. 215-225
-
-
Cambon-Bonavita, M.-A.1
Schmitt, P.2
Zieger, M.3
Flaman, J.-M.4
Lesongeur, F.5
Raguénès, G.6
Bindel, D.7
Frisch, N.8
Lakkis, Z.9
Dupret, D.10
Barbier, G.11
Quérellou, J.12
-
3
-
-
0032814005
-
Archaeal DNA replication: identifying the pieces to solve a puzzle
-
Cann I.K., and Ishino Y. Archaeal DNA replication: identifying the pieces to solve a puzzle. Genetics 152 (1999) 1249-1267
-
(1999)
Genetics
, vol.152
, pp. 1249-1267
-
-
Cann, I.K.1
Ishino, Y.2
-
4
-
-
0029838624
-
PCR fidelity of Pfu DNA polymerase and other thermostable polymerases
-
Cline J., Braman J.C., and Hogrefe H.H. PCR fidelity of Pfu DNA polymerase and other thermostable polymerases. Nucleic Acids Res. 24 (1996) 3546-3551
-
(1996)
Nucleic Acids Res.
, vol.24
, pp. 3546-3551
-
-
Cline, J.1
Braman, J.C.2
Hogrefe, H.H.3
-
5
-
-
0032190674
-
Cloning and expression in Escherichia coli of the recombinant His-tagged DNA polymerases from Pyrococcus furiosus and Pyrococcus woesei
-
Dabrowski S., and Kur J. Cloning and expression in Escherichia coli of the recombinant His-tagged DNA polymerases from Pyrococcus furiosus and Pyrococcus woesei. Protein Exp. Purif. 14 (1998) 131-138
-
(1998)
Protein Exp. Purif.
, vol.14
, pp. 131-138
-
-
Dabrowski, S.1
Kur, J.2
-
6
-
-
0021760092
-
A comprehensive set of sequence analysis programs for the VAX
-
Devereux J., Haeberli P., and Smithies O. A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res. 12 (1984) 387-395
-
(1984)
Nucleic Acids Res.
, vol.12
, pp. 387-395
-
-
Devereux, J.1
Haeberli, P.2
Smithies, O.3
-
7
-
-
0032518398
-
Crystal structure of a bacteriophage T7 replication complex at 2.2 Å resolution
-
Doublie S., Tabor S., Long A.M., Richardson C.C., and Ellenberger T. Crystal structure of a bacteriophage T7 replication complex at 2.2 Å resolution. Nature 391 (1998) 251-258
-
(1998)
Nature
, vol.391
, pp. 251-258
-
-
Doublie, S.1
Tabor, S.2
Long, A.M.3
Richardson, C.C.4
Ellenberger, T.5
-
9
-
-
0000893081
-
Cocrystal structure of an editing complex of Klenow fragment with DNA
-
Freemont P.S., Friedman J.M., Besse L.S., Sanderson M.R., and Steitz T.A. Cocrystal structure of an editing complex of Klenow fragment with DNA. Proc. Natl. Acad. Sci. USA 85 (1988) 8924-8928
-
(1988)
Proc. Natl. Acad. Sci. USA
, vol.85
, pp. 8924-8928
-
-
Freemont, P.S.1
Friedman, J.M.2
Besse, L.S.3
Sanderson, M.R.4
Steitz, T.A.5
-
10
-
-
0032981133
-
DNA replication errors produced by the replicative apparatus of Escherichia coli
-
Fujii S., Akiyama M., Aoki K., Sugaya Y., Higuchi K., Hiraoka M., Miki Y., Saitoh N., Yoshiyama K., Ihara K., Seki M., Ohtsubo E., and Maki H. DNA replication errors produced by the replicative apparatus of Escherichia coli. J. Mol. Biol. 289 (1999) 835-850
-
(1999)
J. Mol. Biol.
, vol.289
, pp. 835-850
-
-
Fujii, S.1
Akiyama, M.2
Aoki, K.3
Sugaya, Y.4
Higuchi, K.5
Hiraoka, M.6
Miki, Y.7
Saitoh, N.8
Yoshiyama, K.9
Ihara, K.10
Seki, M.11
Ohtsubo, E.12
Maki, H.13
-
12
-
-
0035936690
-
Crystal structure of DNA polymerase from hyperthermophilic archaeon Pyrococcus kodakaraensis KOD1
-
Hashimoto H., Nishioka M., Fujiwara S., Takagi M., Imanaka T., Inoue T., and Kai Y. Crystal structure of DNA polymerase from hyperthermophilic archaeon Pyrococcus kodakaraensis KOD1. J. Mol. Biol. 306 (2001) 469-477
-
(2001)
J. Mol. Biol.
, vol.306
, pp. 469-477
-
-
Hashimoto, H.1
Nishioka, M.2
Fujiwara, S.3
Takagi, M.4
Imanaka, T.5
Inoue, T.6
Kai, Y.7
-
13
-
-
0037154224
-
Archaeal dUTPase enhances PCR amplifications with archaeal DNA polymerases by preventing dUTP incorporation
-
Hogrefe H.H., Hansen C.J., and Scott B.R. Archaeal dUTPase enhances PCR amplifications with archaeal DNA polymerases by preventing dUTP incorporation. Proc. Natl. Acad. Sci. USA 99 (2002) 596-601
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 596-601
-
-
Hogrefe, H.H.1
Hansen, C.J.2
Scott, B.R.3
-
14
-
-
0033616725
-
Crystal structure of a thermostable type B DNA polymerase from Thermococcus gorgonarius
-
Hopfner K.-P., Eichinger A., Engh R.A.F., Laue W., Ankenbauer R., Huber R., and Angerer B. Crystal structure of a thermostable type B DNA polymerase from Thermococcus gorgonarius. Proc. Natl. Acad. Sci. USA 96 (1999) 3600-3605
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 3600-3605
-
-
Hopfner, K.-P.1
Eichinger, A.2
Engh, R.A.F.3
Laue, W.4
Ankenbauer, R.5
Huber, R.6
Angerer, B.7
-
15
-
-
0025766848
-
Compilation and alignment of DNA polymerase sequences
-
Ito J., and Braithwaite D.K. Compilation and alignment of DNA polymerase sequences. Nucleic Acids Res. 19 (1991) 4045-4057
-
(1991)
Nucleic Acids Res.
, vol.19
, pp. 4045-4057
-
-
Ito, J.1
Braithwaite, D.K.2
-
16
-
-
0031568308
-
Crystal structure of a thermostable Bacillus DNA polymerase I large fragment at 2.1 Å resolution
-
Kiefer J.R., Mao C., Hansen C.J., Basehore S.L., Hogrefe H.H., Braman J.C., and Beese L.S. Crystal structure of a thermostable Bacillus DNA polymerase I large fragment at 2.1 Å resolution. Structure 5 (1997) 95-108
-
(1997)
Structure
, vol.5
, pp. 95-108
-
-
Kiefer, J.R.1
Mao, C.2
Hansen, C.J.3
Basehore, S.L.4
Hogrefe, H.H.5
Braman, J.C.6
Beese, L.S.7
-
17
-
-
0027391640
-
Characterization of a DNA polymerase from the hyperthermophile archaea Thermococcus litoralis. Vent DNA polymerase, steady state kinetics, thermal stability, processivity, strand displacement, and exonuclease activities
-
Kong H., Kucera R.B., and Jack W.E. Characterization of a DNA polymerase from the hyperthermophile archaea Thermococcus litoralis. Vent DNA polymerase, steady state kinetics, thermal stability, processivity, strand displacement, and exonuclease activities. J. Biol. Chem. 268 (1993) 1965-1975
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 1965-1975
-
-
Kong, H.1
Kucera, R.B.2
Jack, W.E.3
-
19
-
-
0029828233
-
Strategies for achieving high-level expression of genes in Escherichia coli
-
Makrides S. Strategies for achieving high-level expression of genes in Escherichia coli. Microbiol. Rev. 60 (1996) 512-538
-
(1996)
Microbiol. Rev.
, vol.60
, pp. 512-538
-
-
Makrides, S.1
-
20
-
-
0025764762
-
Fidelity of DNA synthesis by the Thermococcus litoralis DNA polymerase-an extremely heat stable enzyme with proofreading activity
-
Mattila P., Korpela J., Tenkanen T., and Pitkanen K. Fidelity of DNA synthesis by the Thermococcus litoralis DNA polymerase-an extremely heat stable enzyme with proofreading activity. Nucleic Acids Res. 19 (1991) 4967-4973
-
(1991)
Nucleic Acids Res.
, vol.19
, pp. 4967-4973
-
-
Mattila, P.1
Korpela, J.2
Tenkanen, T.3
Pitkanen, K.4
-
21
-
-
0032078043
-
Cloning of the xynB gene from Dictyoglomus thermophilum strain Rt46B.1 and action of the gene-product on kraft pulp
-
Morris D.D., Gibbs M.D., Chin C.W., Koh M.H., Wong K.K.Y., Allison R.W., Nelson P.J., and Bergquist P.L. Cloning of the xynB gene from Dictyoglomus thermophilum strain Rt46B.1 and action of the gene-product on kraft pulp. Appl. Environ. Microbiol. 64 (1998) 1759-1765
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 1759-1765
-
-
Morris, D.D.1
Gibbs, M.D.2
Chin, C.W.3
Koh, M.H.4
Wong, K.K.Y.5
Allison, R.W.6
Nelson, P.J.7
Bergquist, P.L.8
-
22
-
-
0031578798
-
Cloning and characterization of a thermostable α-DNA polymerase from the hyperthermophilic archaeon Thermococcus sp. TY
-
Niehaus F., Frey B., and Antranikian G. Cloning and characterization of a thermostable α-DNA polymerase from the hyperthermophilic archaeon Thermococcus sp. TY. Gene 204 (1997) 153-158
-
(1997)
Gene
, vol.204
, pp. 153-158
-
-
Niehaus, F.1
Frey, B.2
Antranikian, G.3
-
23
-
-
0035876715
-
Long and accurate PCR with a mixture of KOD DNA polymerase and its exonuclease deficient mutant enzyme
-
Nishioka M., Mizuguchi H., Fujiwara S.S., Komatsubara M., Itabayashi H., Uemura M., Takagi M., and Imanaka T. Long and accurate PCR with a mixture of KOD DNA polymerase and its exonuclease deficient mutant enzyme. J. Biotechnol. 88 (2001) 141-149
-
(2001)
J. Biotechnol.
, vol.88
, pp. 141-149
-
-
Nishioka, M.1
Mizuguchi, H.2
Fujiwara, S.S.3
Komatsubara, M.4
Itabayashi, H.5
Uemura, M.6
Takagi, M.7
Imanaka, T.8
-
24
-
-
0141442962
-
Overcoming the protein bias of E. coli for enhanced protein expression
-
Novy R., Drott D., Yaeger K., and Mierendorff R. Overcoming the protein bias of E. coli for enhanced protein expression. Innovations 12 (2001) 1-3
-
(2001)
Innovations
, vol.12
, pp. 1-3
-
-
Novy, R.1
Drott, D.2
Yaeger, K.3
Mierendorff, R.4
-
25
-
-
17944380943
-
The Y-family of DNA polymerases
-
Ohmori H., Friedberg E.C., Fuchs R.P., Goodman M.F., Hanaoka F., Hinckle D., Kunkel T.A., Lawrence C.W., Livnch Z., Nohmi T., Prakash L., Prakash S., Todo T., Walker G.C., Wang Z., and Woodgate R. The Y-family of DNA polymerases. Mol. Cell 8 (2001) 7-8
-
(2001)
Mol. Cell
, vol.8
, pp. 7-8
-
-
Ohmori, H.1
Friedberg, E.C.2
Fuchs, R.P.3
Goodman, M.F.4
Hanaoka, F.5
Hinckle, D.6
Kunkel, T.A.7
Lawrence, C.W.8
Livnch, Z.9
Nohmi, T.10
Prakash, L.11
Prakash, S.12
Todo, T.13
Walker, G.C.14
Wang, Z.15
Woodgate, R.16
-
26
-
-
33845925466
-
Structure of large fragment of Escherichia coli DNA polymerase complexed with dTMP
-
Ollis D.L., Brick P., Hamlin R.N., Zuong G., and A Steitz T. Structure of large fragment of Escherichia coli DNA polymerase complexed with dTMP. Nature 313 (1985) F.B. 62-F.B. 76
-
(1985)
Nature
, vol.313
-
-
Ollis, D.L.1
Brick, P.2
Hamlin, R.N.3
Zuong, G.4
A Steitz, T.5
-
27
-
-
0026718843
-
Intervening sequences in an Archaea DNA polymerase gene
-
Perler F.B., Comb D.G., Jack W.E., Moran L.S., Qiang B., Kucera R.B., Benner J., Slatko B.E., Nwankwo D.O., Hempstead S.K., Carlow C.K.S., and Jannasch H. Intervening sequences in an Archaea DNA polymerase gene. Proc. Natl. Acad. Sci. USA 89 (1992) 5577-5581
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 5577-5581
-
-
Perler, F.B.1
Comb, D.G.2
Jack, W.E.3
Moran, L.S.4
Qiang, B.5
Kucera, R.B.6
Benner, J.7
Slatko, B.E.8
Nwankwo, D.O.9
Hempstead, S.K.10
Carlow, C.K.S.11
Jannasch, H.12
-
29
-
-
0034115481
-
Sequencing and expression of further xylanase genes from the hyperthermophile Thermotoga maritima FjSS3B.1
-
Reeves R.A., Morris D.D., Gibbs M.D., Griffiths K.R., Saul D.J., and Bergquist P.L. Sequencing and expression of further xylanase genes from the hyperthermophile Thermotoga maritima FjSS3B.1. Appl. Environ. Microbiol. 66 (2000) 1532-1537
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, pp. 1532-1537
-
-
Reeves, R.A.1
Morris, D.D.2
Gibbs, M.D.3
Griffiths, K.R.4
Saul, D.J.5
Bergquist, P.L.6
-
30
-
-
0030875412
-
The phylogenetic position of the Thermococcus isolate AN1 based on 16S rRNA gene sequence analysis: a proposal that AN1 represents a new species, Thermococcus zilligii sp. Nov
-
Ronimus R., Reysnebach A.-L., Musgrave D.R., and Morgan H.W. The phylogenetic position of the Thermococcus isolate AN1 based on 16S rRNA gene sequence analysis: a proposal that AN1 represents a new species, Thermococcus zilligii sp. Nov. Arch. Microbiol. 168 (1997) 245-248
-
(1997)
Arch. Microbiol.
, vol.168
, pp. 245-248
-
-
Ronimus, R.1
Reysnebach, A.-L.2
Musgrave, D.R.3
Morgan, H.W.4
-
31
-
-
0032052770
-
Consensus-degenerate hybrid oligonucleotide primers for amplification of distantly related sequences
-
Rose T.M., Schultz E.R., Henikoff J.G., Pietrokovski S., McCallum C.M., and Henikoff S. Consensus-degenerate hybrid oligonucleotide primers for amplification of distantly related sequences. Nucleic Acids Res. 26 (1998) 1628-1635
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 1628-1635
-
-
Rose, T.M.1
Schultz, E.R.2
Henikoff, J.G.3
Pietrokovski, S.4
McCallum, C.M.5
Henikoff, S.6
-
33
-
-
0034723160
-
Inteins of Thermococcus fumicolans DNA polymerase are endonucleases with distinct enzymatic behaviors
-
Saves I., Ozanne V., Dietrich J., and Masson J.-M. Inteins of Thermococcus fumicolans DNA polymerase are endonucleases with distinct enzymatic behaviors. Jour. Biol. Chem. 275 (2000) 2341-2355
-
(2000)
Jour. Biol. Chem.
, vol.275
, pp. 2341-2355
-
-
Saves, I.1
Ozanne, V.2
Dietrich, J.3
Masson, J.-M.4
-
34
-
-
4644228452
-
Thermophilic bacterial DNA polymerases with reverse transcriptase activity
-
Shandilya H., Griffiths K., Flynn E.K., Astatke M., Shih P.-J., Lee J.E., Gerard G.F., Gibbs M.D., and Bergquist P.L. Thermophilic bacterial DNA polymerases with reverse transcriptase activity. Extremophiles 8 (2004) 243-251
-
(2004)
Extremophiles
, vol.8
, pp. 243-251
-
-
Shandilya, H.1
Griffiths, K.2
Flynn, E.K.3
Astatke, M.4
Shih, P.-J.5
Lee, J.E.6
Gerard, G.F.7
Gibbs, M.D.8
Bergquist, P.L.9
-
35
-
-
0030014622
-
Cloning of thermostable DNA polymerases from hyperthermophilic marine Archaea with emphasis on Thermococcus sp. 9 °N-7 and mutations affecting 3′-5′ exonuclease activity
-
Southworth M.W., Kong H., Kucera R.B., Jannasch H.W., and Perler F.B. Cloning of thermostable DNA polymerases from hyperthermophilic marine Archaea with emphasis on Thermococcus sp. 9 °N-7 and mutations affecting 3′-5′ exonuclease activity. Proc. Natl. Acad. Sci. USA 93 (1996) 5281-5285
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 5281-5285
-
-
Southworth, M.W.1
Kong, H.2
Kucera, R.B.3
Jannasch, H.W.4
Perler, F.B.5
-
36
-
-
0033581011
-
DNA polymerases: structural diversity and common mechanisms
-
Steitz T.A. DNA polymerases: structural diversity and common mechanisms. J. Biol. Chem. 218 (1999) 17395-17398
-
(1999)
J. Biol. Chem.
, vol.218
, pp. 17395-17398
-
-
Steitz, T.A.1
-
37
-
-
33845930744
-
-
D.L. Swafford, PAUP*: phylogenetic analysis using Parsimony (* and other methods), Sinauer Associates, 2002.
-
-
-
-
38
-
-
0030666190
-
Characterization of a DNA polymerase from Pyrococcus sp. Strain KOD1 and its application to PCR
-
Takagi M., Nishioka M., Kakihara H.M., Kitabayashi H., Inoue B., Kawakami B., Oka M., and Imanaka T. Characterization of a DNA polymerase from Pyrococcus sp. Strain KOD1 and its application to PCR. Appl. Environ. Microbiol. 63 (1997) 4504-4510
-
(1997)
Appl. Environ. Microbiol.
, vol.63
, pp. 4504-4510
-
-
Takagi, M.1
Nishioka, M.2
Kakihara, H.M.3
Kitabayashi, H.4
Inoue, B.5
Kawakami, B.6
Oka, M.7
Imanaka, T.8
-
39
-
-
0035319917
-
259 conserved the exonuclease domain of hyperthermostable DNA polymerase I from Pyrococcus horikoshii
-
259 conserved the exonuclease domain of hyperthermostable DNA polymerase I from Pyrococcus horikoshii. Extremophiles 5 (2001) 111-117
-
(2001)
Extremophiles
, vol.5
, pp. 111-117
-
-
Zheng, R.1
Matsui, E.2
Shen, Y.3
Musati, K.V.4
Feng, Y.5
Damis, S.6
Kawarabayashi, Y.7
Kikuchi, H.8
Harata, K.9
Matsui, I.10
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