Hexadecanedionic acid-sepharose 4B: A new tool for preparation of albumin-depleted plasma

Journal of Proteome Research

Volumn 5, Issue 12, 2006, Pages 3453-3458

  Soskic, Vukic ^a   Schwall, Gerhard ^a   Nyakatura, Elke ^a   Poznanovic, Slobodan ^a   Stegmann, Werner ^a   Schrattenholz, Andre ^a  

^a PROTEOSYS AG   (Germany)

Author keywords

Affinity separation; Hexadecanedionic acid; Human plasma albumin; Mass spectrometry; Plasma; Proteomics; Two dimensional separation

Indexed keywords

HEXADECANE; HEXADECANEDIONIC ACID; SEPHAROSE; SERUM ALBUMIN;

ANALYTIC METHOD; ARTICLE; CONTROLLED STUDY; HUMAN; HUMAN TISSUE; INTERMETHOD COMPARISON; MASS SPECTROMETRY; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEOMICS; TWO DIMENSIONAL GEL ELECTROPHORESIS;

AFFINITY LABELS; COMPUTATIONAL BIOLOGY; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; HUMANS; PALMITIC ACIDS; SEPHAROSE; SERUM; SERUM ALBUMIN; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION;

EID: 33845448285     PISSN: 15353893     EISSN: None     Source Type: Journal    
DOI: 10.1021/pr060387q     Document Type: Article

References (20)

1. Anderson, N. L.; Anderson, N. G. The human plasma proteome: History, character, and diagnostic prospects. Mol. Cell. Proteomics 2002, 1 (11), 845-867.
2. Zolotarjova, N.; Martosella, J.; Nicol, G.; Bailey, J.; Boyes, B. E.; Barrett, W. C. Differences among techniques for high-abundant protein depletion. Proteomics 2005, 5 (13), 3304-3313.
3. Travis, J.; Pannell, R. Selective removal of albumin from plasma by affinity chromatography. Clin. Chim. Acta 1973, 49 (1), 49-52.
4. Travis, J.; Bowen, J.; Tewksbury, D.; Johnson, D.; Pannell, R. Isolation of albumin from whole human plasma and fractionation of albumin-depleted plasma. Biochem. J. 1976, 157 (2), 301-306.
5. Raymackers, J.; Daniels, A.; DeBrabandere, V.; Missiaen, C.; Dauwe, M.; Verhaert, P.; Vanmecheien, E.; Meheus, L. Identification of two-dimensionally separated human cerebrospinal fluid proteins by N-terminal sequencing, matrix-assisted laser desorption/ionization-mass spectrometry, nanoliquid chromatography-electrospray ionization-time of flight-mass spectrometry, and tandem mass spectrometry. Electrophoresis 2000, 21 (11), 2266-2283.
6. Steel, L. F.; Trotter, M. G.; Nakajima, P. B.; Mattu, T. S.; Gonye, G.; Block, T. Efficient and Specific Removal of Albumin from Human Serum Samples. Mol. Cell. Proteomics 2003, 2 (4), 262-270.
7. Hinerfeld, D.; Innamorati, D.; Pirro, J.; Tam, S. W. Serum/Plasma depletion with chicken immunoglobulin Y antibodies for proteomic analysis from multiple Mammalian species. J. Biomol. Tech. 2004, 15 (3), 184-190.
8. Gong, Y.; Li, X.; Yang, B.; Ying, W.; Li, D.; Zhang, Y.; Dai, S.; Cai, Y.; Wang, J.; He, F.; Qian, X. Different Immunoaffinity Fractionation Strategies to Characterize the Human Plasma Proteome. J. Proteome Res. 2006, 5 (6), 1379-1387.
9. Hinson, D. L.; Webber, R. J. Miniaturization of the BCA protein assay. BioTechniques 1988, 6 (14), 16-19.
10. Laemmli, U. K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 1970, 227 (5159), 680-685.
11. Shevchenko, A.; Wilm, M.; Vorm, O.; Mann, M. Mass Spectrometric Sequencing of Proteins from Silver-Stained Polyacrylamide Gels. Anal. Chem. 1996, 68 (5), 850-858.
12. Cahill, M. A.; Wozny, W.; Schwall, G.; Schroer, K.; Holzer, K.; Poznanovic, S.; Hunziger, C.; Vogt, J. A.; Stegmann, W.; Matthies, H.; Schrattenholz, A. Analysis of relative isotopologue abundances for quantitative profiling of complex protein mixtures labelled with the acrylamide/D3-acrylamide alkylation tag system. Rapid Commun. Mass. Spectrom. 2003, 17 (12), 1283-1290.
13. Sommer, S.; Hunzinger, C.; Schillo, S.; Klemm, M.; Biefang-Arndt, K.; Schwall, G.; Putter, S.; Hoelzer, K.; Schroer, K.; Stegmann, W.; Schrattenholz, A. Molecular analysis of homocysteic acid-induced neuronal stress. J. Proteome Res. 2004, 3 (4), 572-581.
14. Hunzinger, C.; Wozny, W.; Schwall, G. P; Poznanovic, S.; Stegmann, W.; Zengerling, H.; Schoepf, R.; Groebe, K.; Cahill, M. A.; Osiewacz, H. D.; Jagemann, N.; Bloch, M.; Dencher, N. A.; Krause, F.; Schrattenholz, A. Comparative profiling of the mammalian mitochondrial proteome: multiple aconitase-2 isoforms including N-formylkynurenine modifications as part of a protein biomarker signature for reactive oxidative species. J. Proteome Res. 2006, 5 (6), 625-633.
15. Kunishima, M.; Kawachi, C.; Hioki, K.; Terao, K.; Tani, S. Formation of carboxamides by direct condensation of carboxylic acids and amines in alcohols using a new alcohol- and water soluble condensing agent: DMT-MM, Tetrahedron 2001, 57 (8), 1551-1558.
16. Schrattenholz, A. Proteomics: How to control highly dynamic patterns of millions of molecules and interpret changes correctly? Drug Discovery Today-Technol. 2004, 1 (1), 1-8.
17. Neubauer, H.; Clare, S. E.; Kurek, R.; Fehm, T.; Wallwiener, D.; Sotlar, K.; Nordheim, A.; Wozny, W.; Schwall, G. P.; Poznanovic, S.; Sastri, C.; Hunzinger, C.; Stegmann, W.; Schrattenholz, A.; Cahill, M. A. Breast cancer proteomics by laser capture microdissection, sample pooling, 54-cm IPG IEF, and differential iodine radioisotope detection. Electrophoresis 2006, 27 (9), 1840-1852.
18. Bailey, J.; Zhang, K.; Zolotarjova, N.; Nicol, G.; Szafranski, C. Removing high-abundance proteins from serum. Genet. Eng. News 2003, 23 (19), 32-36.
19. Simard, J. R.; Zunszaln, P. A.; Ha, C. E.; Yang, J. S.; Bhagavan, N. V.; Petitpas, I.; Curry, S.; Hamilton, J. A. Locating high-affinity fatty acid-binding sites on albumin by X-ray crystallography and NMR spectroscopy. Proc. Natl. Acad. Sci. U.S.A. 2005, 102 (50), 17958-17963.
20. Zunszain, P. A.; Ghuman, J.; Komatsu, T.; Tsuchida, E.; Curry, S. Crystal structural analysis of human serum albumin complexed with hemin and fatty acid. BMC Struct. Biol. 2003, 3 (6), 1-9.