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Volumn 89, Issue 1, 2007, Pages 134-142

Gene duplication and inactivation in the HPRT gene family

Author keywords

Comparative genomics; Gene inactivation; Gene structure; Genome evolution; HPRT1; HPRT1L; PRTFDC1

Indexed keywords

HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE; PHOSPHORIBOSYL TRANSFERASE DOMAIN CONTAINING PROTEIN 1; PROTEIN;

EID: 33845206149     PISSN: 08887543     EISSN: 10898646     Source Type: Journal    
DOI: 10.1016/j.ygeno.2006.07.003     Document Type: Article
Times cited : (23)

References (50)
  • 2
    • 0028342845 scopus 로고
    • The evolution of functionally novel proteins after gene duplication
    • Hughes A.L. The evolution of functionally novel proteins after gene duplication. Proc. Biol. Sci. 256 (1994) 119-124
    • (1994) Proc. Biol. Sci. , vol.256 , pp. 119-124
    • Hughes, A.L.1
  • 3
    • 15544389841 scopus 로고    scopus 로고
    • Rapid subfunctionalization accompanied by prolonged and substantial neofunctionalization in duplicate gene evolution
    • He X., and Zhang J. Rapid subfunctionalization accompanied by prolonged and substantial neofunctionalization in duplicate gene evolution. Genetics 169 (2005) 1157-1164
    • (2005) Genetics , vol.169 , pp. 1157-1164
    • He, X.1    Zhang, J.2
  • 4
    • 0033360995 scopus 로고    scopus 로고
    • When less is more: gene loss as an engine of evolutionary change
    • Olson M.V. When less is more: gene loss as an engine of evolutionary change. Am. J. Hum. Genet. 64 (1999) 18-23
    • (1999) Am. J. Hum. Genet. , vol.64 , pp. 18-23
    • Olson, M.V.1
  • 5
    • 0037213794 scopus 로고    scopus 로고
    • Wild mice: an ever-increasing contribution to a popular mammalian model
    • Guenet J.L., and Bonhomme F. Wild mice: an ever-increasing contribution to a popular mammalian model. Trends Genet. 19 (2003) 24-31
    • (2003) Trends Genet. , vol.19 , pp. 24-31
    • Guenet, J.L.1    Bonhomme, F.2
  • 7
    • 0019787519 scopus 로고
    • Uric acid provides an antioxidant defense in humans against oxidant- and radical-caused aging and cancer: a hypothesis
    • Ames B.N., Cathcart R., Schwiers E., and Hochstein P. Uric acid provides an antioxidant defense in humans against oxidant- and radical-caused aging and cancer: a hypothesis. Proc. Natl. Acad. Sci. USA 78 (1981) 6858-6862
    • (1981) Proc. Natl. Acad. Sci. USA , vol.78 , pp. 6858-6862
    • Ames, B.N.1    Cathcart, R.2    Schwiers, E.3    Hochstein, P.4
  • 8
    • 0000116599 scopus 로고
    • The origin of man
    • Orowan E. The origin of man. Nature 175 (1955) 683-684
    • (1955) Nature , vol.175 , pp. 683-684
    • Orowan, E.1
  • 9
    • 0006091203 scopus 로고
    • Origin of man
    • Haldane J.B. Origin of man. Nature 176 (1955) 169-170
    • (1955) Nature , vol.176 , pp. 169-170
    • Haldane, J.B.1
  • 10
    • 0020349741 scopus 로고
    • Genetic defects in human purine and pyrimidine metabolism
    • Boss G.R., and Seegmiller J.E. Genetic defects in human purine and pyrimidine metabolism. Annu. Rev. Genet. 16 (1982) 297-328
    • (1982) Annu. Rev. Genet. , vol.16 , pp. 297-328
    • Boss, G.R.1    Seegmiller, J.E.2
  • 11
    • 0023125295 scopus 로고
    • Deficiency of AMP deaminase in erythrocytes
    • Ogasawara N., et al. Deficiency of AMP deaminase in erythrocytes. Hum. Genet. 75 (1987) 15-18
    • (1987) Hum. Genet. , vol.75 , pp. 15-18
    • Ogasawara, N.1
  • 12
    • 0026642190 scopus 로고
    • Molecular basis of AMP deaminase deficiency in skeletal muscle
    • Morisaki T., et al. Molecular basis of AMP deaminase deficiency in skeletal muscle. Proc. Natl. Acad. Sci. USA 89 (1992) 6457-6461
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 6457-6461
    • Morisaki, T.1
  • 13
    • 0033596881 scopus 로고    scopus 로고
    • Common variant in AMPD1 gene predicts improved clinical outcome in patients with heart failure
    • Loh E., et al. Common variant in AMPD1 gene predicts improved clinical outcome in patients with heart failure. Circulation 99 (1999) 1422-1425
    • (1999) Circulation , vol.99 , pp. 1422-1425
    • Loh, E.1
  • 14
    • 0033815301 scopus 로고    scopus 로고
    • A common variant of the AMPD1 gene predicts improved cardiovascular survival in patients with coronary artery disease
    • Anderson J.L., et al. A common variant of the AMPD1 gene predicts improved cardiovascular survival in patients with coronary artery disease. J. Am. Coll. Cardiol. 36 (2000) 1248-1252
    • (2000) J. Am. Coll. Cardiol. , vol.36 , pp. 1248-1252
    • Anderson, J.L.1
  • 15
    • 0018420199 scopus 로고
    • Marsupial-mouse cell hybrids containing fragments of the marsupial X chromosome
    • Graves J.A., Chew G.K., Cooper D.W., and Johnston P.G. Marsupial-mouse cell hybrids containing fragments of the marsupial X chromosome. Somatic Cell Genet. 5 (1979) 481-489
    • (1979) Somatic Cell Genet. , vol.5 , pp. 481-489
    • Graves, J.A.1    Chew, G.K.2    Cooper, D.W.3    Johnston, P.G.4
  • 16
    • 0033134641 scopus 로고    scopus 로고
    • The chicken HPRT gene: a counter selectable marker for the DT40 cell line
    • Fukagawa T., et al. The chicken HPRT gene: a counter selectable marker for the DT40 cell line. Nucleic Acids Res. 27 (1999) 1966-1969
    • (1999) Nucleic Acids Res. , vol.27 , pp. 1966-1969
    • Fukagawa, T.1
  • 17
    • 0000544518 scopus 로고    scopus 로고
    • Lesch-Nyhan Disease and Its Variants
    • Scriver C.R., Beaudet A.L., Sly W.S., and Valle D. (Eds), McGraw-Hill, New York
    • Jinnah H.A., and Friedmann T. Lesch-Nyhan Disease and Its Variants. In: Scriver C.R., Beaudet A.L., Sly W.S., and Valle D. (Eds). The Metabolic & Molecular Bases of Inherited Disease (2001), McGraw-Hill, New York 2537-2570
    • (2001) The Metabolic & Molecular Bases of Inherited Disease , pp. 2537-2570
    • Jinnah, H.A.1    Friedmann, T.2
  • 18
    • 0023090920 scopus 로고
    • A potential animal model for Lesch-Nyhan syndrome through introduction of HPRT mutations into mice
    • Kuehn M.R., Bradley A., Robertson E.J., and Evans M.J. A potential animal model for Lesch-Nyhan syndrome through introduction of HPRT mutations into mice. Nature 326 (1987) 295-298
    • (1987) Nature , vol.326 , pp. 295-298
    • Kuehn, M.R.1    Bradley, A.2    Robertson, E.J.3    Evans, M.J.4
  • 19
    • 0023150598 scopus 로고
    • HPRT-deficient (Lesch-Nyhan) mouse embryos derived from germline colonization by cultured cells
    • Hooper M., Hardy K., Handyside A., Hunter S., and Monk M. HPRT-deficient (Lesch-Nyhan) mouse embryos derived from germline colonization by cultured cells. Nature 326 (1987) 292-295
    • (1987) Nature , vol.326 , pp. 292-295
    • Hooper, M.1    Hardy, K.2    Handyside, A.3    Hunter, S.4    Monk, M.5
  • 20
    • 0031579461 scopus 로고    scopus 로고
    • Identification of a novel tissue-specific processed HPRT gene and comparison with X-linked gene transcription in the Australian marsupial Macropus robustus
    • Noyce L., Conaty J., and Piper A.A. Identification of a novel tissue-specific processed HPRT gene and comparison with X-linked gene transcription in the Australian marsupial Macropus robustus. Gene 186 (1997) 87-95
    • (1997) Gene , vol.186 , pp. 87-95
    • Noyce, L.1    Conaty, J.2    Piper, A.A.3
  • 21
    • 33645503928 scopus 로고    scopus 로고
    • Pseudogenes of the human HPRT1 gene
    • Nicklas J.A. Pseudogenes of the human HPRT1 gene. Environ. Mol. Mutagen. 47 (2005) 212-218
    • (2005) Environ. Mol. Mutagen. , vol.47 , pp. 212-218
    • Nicklas, J.A.1
  • 22
    • 0032580152 scopus 로고    scopus 로고
    • A molecular timescale for vertebrate evolution
    • Kumar S., and Hedges S.B. A molecular timescale for vertebrate evolution. Nature 392 (1998) 917-920
    • (1998) Nature , vol.392 , pp. 917-920
    • Kumar, S.1    Hedges, S.B.2
  • 23
    • 1242274629 scopus 로고    scopus 로고
    • Major events in the genome evolution of vertebrates: paranome age and size differ considerably between ray-finned fishes and land vertebrates
    • Vandepoele K., De Vos W., Taylor J.S., Meyer A., and Van de Peer Y. Major events in the genome evolution of vertebrates: paranome age and size differ considerably between ray-finned fishes and land vertebrates. Proc. Natl. Acad. Sci. USA 101 (2004) 1638-1643
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 1638-1643
    • Vandepoele, K.1    De Vos, W.2    Taylor, J.S.3    Meyer, A.4    Van de Peer, Y.5
  • 24
    • 0041465867 scopus 로고    scopus 로고
    • Comparative analyses of multi-species sequences from targeted genomic regions
    • Thomas J.W., et al. Comparative analyses of multi-species sequences from targeted genomic regions. Nature 424 (2003) 788-793
    • (2003) Nature , vol.424 , pp. 788-793
    • Thomas, J.W.1
  • 25
    • 0032876994 scopus 로고    scopus 로고
    • Intron-genome size relationship on a large evolutionary scale
    • Vinogradov A.E. Intron-genome size relationship on a large evolutionary scale. J. Mol. Evol. 49 (1999) 376-384
    • (1999) J. Mol. Evol. , vol.49 , pp. 376-384
    • Vinogradov, A.E.1
  • 26
    • 2042437650 scopus 로고    scopus 로고
    • Initial sequencing and analysis of the human genome
    • Lander E.S., et al. Initial sequencing and analysis of the human genome. Nature 409 (2001) 860-921
    • (2001) Nature , vol.409 , pp. 860-921
    • Lander, E.S.1
  • 27
    • 1542563409 scopus 로고    scopus 로고
    • Initial sequencing and comparative analysis of the mouse genome
    • Waterston R.H., et al. Initial sequencing and comparative analysis of the mouse genome. Nature 420 (2002) 520-562
    • (2002) Nature , vol.420 , pp. 520-562
    • Waterston, R.H.1
  • 28
    • 1842684068 scopus 로고    scopus 로고
    • Genome sequence of the Brown Norway rat yields insights into mammalian evolution
    • Gibbs R.A., et al. Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Nature 428 (2004) 493-521
    • (2004) Nature , vol.428 , pp. 493-521
    • Gibbs, R.A.1
  • 29
    • 10644283823 scopus 로고    scopus 로고
    • Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
    • Hillier L.W., et al. Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution. Nature 432 (2004) 695-716
    • (2004) Nature , vol.432 , pp. 695-716
    • Hillier, L.W.1
  • 30
    • 0037162885 scopus 로고    scopus 로고
    • Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes
    • Aparicio S., et al. Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes. Science 297 (2002) 1301-1310
    • (2002) Science , vol.297 , pp. 1301-1310
    • Aparicio, S.1
  • 31
    • 7244259101 scopus 로고    scopus 로고
    • Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype
    • Jaillon O., et al. Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype. Nature 431 (2004) 946-957
    • (2004) Nature , vol.431 , pp. 946-957
    • Jaillon, O.1
  • 32
    • 0034617303 scopus 로고    scopus 로고
    • Purine phosphoribosyltransferases
    • Craig III S.P., and Eakin A.E. Purine phosphoribosyltransferases. J. Biol. Chem. 275 (2000) 20231-20234
    • (2000) J. Biol. Chem. , vol.275 , pp. 20231-20234
    • Craig III, S.P.1    Eakin, A.E.2
  • 33
    • 28644447707 scopus 로고    scopus 로고
    • Genome sequence, comparative analysis and haplotype structure of the domestic dog
    • Lindblad-Toh K., et al. Genome sequence, comparative analysis and haplotype structure of the domestic dog. Nature 438 (2005) 803-819
    • (2005) Nature , vol.438 , pp. 803-819
    • Lindblad-Toh, K.1
  • 34
    • 0031256078 scopus 로고    scopus 로고
    • Pieces of the puzzle: expressed sequence tags and the catalog of human genes
    • Schuler G.D. Pieces of the puzzle: expressed sequence tags and the catalog of human genes. J. Mol. Med. 75 (1997) 694-698
    • (1997) J. Mol. Med. , vol.75 , pp. 694-698
    • Schuler, G.D.1
  • 35
    • 0037015010 scopus 로고    scopus 로고
    • Inactivation of CMP-N-acetylneuraminic acid hydroxylase occurred prior to brain expansion during human evolution
    • Chou H.H., et al. Inactivation of CMP-N-acetylneuraminic acid hydroxylase occurred prior to brain expansion during human evolution. Proc. Natl. Acad. Sci. USA 99 (2002) 11736-11741
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 11736-11741
    • Chou, H.H.1
  • 36
    • 33645769791 scopus 로고    scopus 로고
    • Large-Scale Trends in the Evolution of Gene Structures within 11 Animal Genomes
    • Yandell M., et al. Large-Scale Trends in the Evolution of Gene Structures within 11 Animal Genomes. PLoS Comput. Biol. 2 (2006) 113-125
    • (2006) PLoS Comput. Biol. , vol.2 , pp. 113-125
    • Yandell, M.1
  • 37
    • 4744355710 scopus 로고    scopus 로고
    • Compactness of human housekeeping genes: selection for economy or genomic design?
    • Vinogradov A.E. Compactness of human housekeeping genes: selection for economy or genomic design?. Trends Genet. 20 (2004) 248-253
    • (2004) Trends Genet. , vol.20 , pp. 248-253
    • Vinogradov, A.E.1
  • 38
    • 0029941393 scopus 로고    scopus 로고
    • The functional conservation of proteins in evolutionary alleles and the dominant role of enhancers in evolution
    • Xue L., and Noll M. The functional conservation of proteins in evolutionary alleles and the dominant role of enhancers in evolution. EMBO J. 15 (1996) 3722-3731
    • (1996) EMBO J. , vol.15 , pp. 3722-3731
    • Xue, L.1    Noll, M.2
  • 39
    • 12744278167 scopus 로고    scopus 로고
    • Uprobe: A genome-wide universal probe resource for comparative physical mapping in vertebrates
    • Kellner W.A., Sullivan R.T., Carlson B.H., and Thomas J.W. Uprobe: A genome-wide universal probe resource for comparative physical mapping in vertebrates. Genome Res. 15 (2005) 166-173
    • (2005) Genome Res. , vol.15 , pp. 166-173
    • Kellner, W.A.1    Sullivan, R.T.2    Carlson, B.H.3    Thomas, J.W.4
  • 40
    • 7444259980 scopus 로고    scopus 로고
    • An intermediate grade of finished genomic sequence suitable for comparative analyses
    • Blakesley R.W., et al. An intermediate grade of finished genomic sequence suitable for comparative analyses. Genome Res. 14 (2004) 2235-2244
    • (2004) Genome Res. , vol.14 , pp. 2235-2244
    • Blakesley, R.W.1
  • 41
    • 0035189310 scopus 로고    scopus 로고
    • Spidey: a tool for mRNA-to-genomic alignments
    • Wheelan S.J., Church D.M., and Ostell J.M. Spidey: a tool for mRNA-to-genomic alignments. Genome Res. 11 (2001) 1952-1957
    • (2001) Genome Res. , vol.11 , pp. 1952-1957
    • Wheelan, S.J.1    Church, D.M.2    Ostell, J.M.3
  • 42
    • 0037267806 scopus 로고    scopus 로고
    • Human-mouse alignments with BLASTZ
    • Schwartz S., et al. Human-mouse alignments with BLASTZ. Genome Res. 13 (2003) 103-107
    • (2003) Genome Res. , vol.13 , pp. 103-107
    • Schwartz, S.1
  • 43
    • 26844580922 scopus 로고    scopus 로고
    • Genome sizes in afrotheria, xenarthra, euarchontoglires, and laurasiatheria
    • Redi C.A., et al. Genome sizes in afrotheria, xenarthra, euarchontoglires, and laurasiatheria. J. Hered. 96 (2005) 485-493
    • (2005) J. Hered. , vol.96 , pp. 485-493
    • Redi, C.A.1
  • 44
    • 3242887157 scopus 로고    scopus 로고
    • CD-Search: protein domain annotations on the fly
    • Marchler-Bauer A., and Bryant S.H. CD-Search: protein domain annotations on the fly. Nucleic Acids Res. 32 (2004) W327-W331
    • (2004) Nucleic Acids Res. , vol.32
    • Marchler-Bauer, A.1    Bryant, S.H.2
  • 46
    • 0026691182 scopus 로고
    • The rapid generation of mutation data matrices from protein sequences
    • Jones D.T., Taylor W.R., and Thornton J.M. The rapid generation of mutation data matrices from protein sequences. Comput. Appl. Biosci. 8 (1992) 275-282
    • (1992) Comput. Appl. Biosci. , vol.8 , pp. 275-282
    • Jones, D.T.1    Taylor, W.R.2    Thornton, J.M.3
  • 47
    • 0036205377 scopus 로고    scopus 로고
    • TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing
    • Schmidt H.A., Strimmer K., Vingron M., and von Haeseler A. TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics 18 (2002) 502-504
    • (2002) Bioinformatics , vol.18 , pp. 502-504
    • Schmidt, H.A.1    Strimmer, K.2    Vingron, M.3    von Haeseler, A.4
  • 48
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F., and Huelsenbeck J.P. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19 (2003) 1572-1574
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 49
    • 0030683599 scopus 로고    scopus 로고
    • PAML: a program package for phylogenetic analysis by maximum likelihood
    • Yang Z. PAML: a program package for phylogenetic analysis by maximum likelihood. Comput. Appl. Biosci. 13 (1997) 555-556
    • (1997) Comput. Appl. Biosci. , vol.13 , pp. 555-556
    • Yang, Z.1


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