-
1
-
-
0034069495
-
Gene ontology: Tool for the unification of biology
-
The Gene Ontology Consortium
-
Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT, Harris MA, Hill DP, Issel-Tarver L, Kasarskis A, Lewis S, Matese JC, Richardson JE, Ringwald M, Rubin GM, Sherlock G (2000) Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 25:25-29
-
(2000)
Nat Genet
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
Cherry, J.M.6
Davis, A.P.7
Dolinski, K.8
Dwight, S.S.9
Eppig, J.T.10
Harris, M.A.11
Hill, D.P.12
Issel-Tarver, L.13
Kasarskis, A.14
Lewis, S.15
Matese, J.C.16
Richardson, J.E.17
Ringwald, M.18
Rubin, G.M.19
Sherlock, G.20
more..
-
2
-
-
0026360180
-
Saturation mutagenesis of the UASNTR (GATAA) responsible for nitrogen catabolite repression-sensitive transcriptional activation of the allantoin pathway genes in Saccharomyces cerevisiae
-
Bysani N, Daugherty JR, Cooper TG (1991) Saturation mutagenesis of the UASNTR (GATAA) responsible for nitrogen catabolite repression-sensitive transcriptional activation of the allantoin pathway genes in Saccharomyces cerevisiae. J Bacteriol 173: 4977-4982
-
(1991)
J Bacteriol
, vol.173
, pp. 4977-4982
-
-
Bysani, N.1
Daugherty, J.R.2
Cooper, T.G.3
-
3
-
-
0036855423
-
SNOMAD (Standardization and NOrmalization of MicroArray Data): Web-accessible gene expression data analysis
-
Colantuoni C, Henry G, Zeger S, Pevsner J (2002) SNOMAD (Standardization and NOrmalization of MicroArray Data): web-accessible gene expression data analysis. Bioinformatics 18:1540-1541
-
(2002)
Bioinformatics
, vol.18
, pp. 1540-1541
-
-
Colantuoni, C.1
Henry, G.2
Zeger, S.3
Pevsner, J.4
-
4
-
-
0034625341
-
Saccharomyces cerevisiae GATA sequences function as TATA elements during nitrogen catabolite repression and when Gln3p is excluded from the nucleus by overproduction of Ure2p
-
Cox KH, Rai R, Distler M, Daugherty JR, Coffman JA, Cooper TG (2000) Saccharomyces cerevisiae GATA sequences function as TATA elements during nitrogen catabolite repression and when Gln3p is excluded from the nucleus by overproduction of Ure2p. J Biol Chem 275:17611-17618
-
(2000)
J Biol Chem
, vol.275
, pp. 17611-17618
-
-
Cox, K.H.1
Rai, R.2
Distler, M.3
Daugherty, J.R.4
Coffman, J.A.5
Cooper, T.G.6
-
5
-
-
0031764409
-
Regulation of expression of the amino acid transporter gene BAP3 in Saccharomyces cerevisiae
-
De Boer M, Bebelman JP, Goncalves PM, Maat J, Van Heerikhuizen H, Planta RJ (1998) Regulation of expression of the amino acid transporter gene BAP3 in Saccharomyces cerevisiae. Mol Microbiol 30:603-613
-
(1998)
Mol Microbiol
, vol.30
, pp. 603-613
-
-
De Boer, M.1
Bebelman, J.P.2
Goncalves, P.M.3
Maat, J.4
Van Heerikhuizen, H.5
Planta, R.J.6
-
6
-
-
0030669030
-
Exploring the metabolic and genetic control of gene expression on a genomic scale
-
DeRisi JL, Iyer VR, Brown PO (1997) Exploring the metabolic and genetic control of gene expression on a genomic scale. Science 278:680-686
-
(1997)
Science
, vol.278
, pp. 680-686
-
-
DeRisi, J.L.1
Iyer, V.R.2
Brown, P.O.3
-
7
-
-
0027332209
-
Activities of the enzymes of the Ehrlich pathway and formation of branched-chain alcohols in Saccharomyces cerevisiae and Candida utilis grown in continuous culture on valine or ammonium as sole nitrogen source
-
Derrick S, Large PJ (1993) Activities of the enzymes of the Ehrlich pathway and formation of branched-chain alcohols in Saccharomyces cerevisiae and Candida utilis grown in continuous culture on valine or ammonium as sole nitrogen source. J Gen Microbiol 139:2783-2792
-
(1993)
J Gen Microbiol
, vol.139
, pp. 2783-2792
-
-
Derrick, S.1
Large, P.J.2
-
8
-
-
0030613543
-
A 13C nuclear magnetic resonance investigation of the metabolism of leucine to isoamyl alcohol in Saccharomyces cerevisiae
-
Dickinson JR, Lanterman MM, Danner DJ, Pearson BM, Sanz P, Harrison SJ, Hewlins MJ (1997) A 13C nuclear magnetic resonance investigation of the metabolism of leucine to isoamyl alcohol in Saccharomyces cerevisiae. J Biol Chem 272:26871-26878
-
(1997)
J Biol Chem
, vol.272
, pp. 26871-26878
-
-
Dickinson, J.R.1
Lanterman, M.M.2
Danner, D.J.3
Pearson, B.M.4
Sanz, P.5
Harrison, S.J.6
Hewlins, M.J.7
-
9
-
-
0027207802
-
A study of branched-chain amino acid aminotransferase and isolation of mutations affecting the catabolism of branched-chain amino acids in Saccharomyces cerevisiae
-
Dickinson JR, Norte V (1993) A study of branched-chain amino acid aminotransferase and isolation of mutations affecting the catabolism of branched-chain amino acids in Saccharomyces cerevisiae. FEBS Lett 326:29-32
-
(1993)
FEBS Lett
, vol.326
, pp. 29-32
-
-
Dickinson, J.R.1
Norte, V.2
-
10
-
-
0037424342
-
The catabolism of amino acids to long chain and complex alcohols in Saccharomyces cerevisiae
-
Dickinson JR, Salgado LE, Hewlins MJ (2003) The catabolism of amino acids to long chain and complex alcohols in Saccharomyces cerevisiae. J Biol Chem 278:8028-8034
-
(2003)
J Biol Chem
, vol.278
, pp. 8028-8034
-
-
Dickinson, J.R.1
Salgado, L.E.2
Hewlins, M.J.3
-
11
-
-
0029786833
-
Two yeast homologs of ECA39, a target for c-Myc regulation, code for cytosolic and mitochondrial branched-chain amino acid aminotransferases
-
Eden A, Simchen G, Benvenisty N (1996) Two yeast homologs of ECA39, a target for c-Myc regulation, code for cytosolic and mitochondrial branched-chain amino acid aminotransferases. J Biol Chem 271:20242-20245
-
(1996)
J Biol Chem
, vol.271
, pp. 20242-20245
-
-
Eden, A.1
Simchen, G.2
Benvenisty, N.3
-
12
-
-
0035071031
-
Involvement of branched-chain amino acid aminotransferases in the production of fusel alcohols during fermentation in yeast
-
Eden A, Van Nedervelde L, Drukker M, Benvenisty N, Debourg A (2001) Involvement of branched-chain amino acid aminotransferases in the production of fusel alcohols during fermentation in yeast. Appl Microbiol Biotechnol 55:296-300
-
(2001)
Appl Microbiol Biotechnol
, vol.55
, pp. 296-300
-
-
Eden, A.1
Van Nedervelde, L.2
Drukker, M.3
Benvenisty, N.4
Debourg, A.5
-
13
-
-
84979193812
-
Über die bedingungen der fuselölbildung und über ihren zusammenhang mit dem eiweissaufbau der hefe
-
Ehrlich F (1907) Über die bedingungen der fuselölbildung und über ihren zusammenhang mit dem eiweissaufbau der hefe. Bere Deut Chem Ges 40:1027-1047
-
(1907)
Bere Deut Chem Ges
, vol.40
, pp. 1027-1047
-
-
Ehrlich, F.1
-
14
-
-
0035723369
-
The role of the yeast plasma membrane SPS nutrient sensor in the metabolic response to extracellular amino acids
-
Forsberg H, Gilstring CF, Zargari A, Martinez P, Ljungdahl PO (2001) The role of the yeast plasma membrane SPS nutrient sensor in the metabolic response to extracellular amino acids. Mol Microbiol 42:215-228
-
(2001)
Mol Microbiol
, vol.42
, pp. 215-228
-
-
Forsberg, H.1
Gilstring, C.F.2
Zargari, A.3
Martinez, P.4
Ljungdahl, P.O.5
-
15
-
-
0029768098
-
Mitochondrial and cytosolic branched-chain amino acid transaminases from yeast, homologs of the myc oncogene-regulated Eca39 protein
-
Kispal G, Steiner H, Court DA, Rolinski B, Lill R (1996) Mitochondrial and cytosolic branched-chain amino acid transaminases from yeast, homologs of the myc oncogene-regulated Eca39 protein. J Biol Chem 271:24458-24464
-
(1996)
J Biol Chem
, vol.271
, pp. 24458-24464
-
-
Kispal, G.1
Steiner, H.2
Court, D.A.3
Rolinski, B.4
Lill, R.5
-
16
-
-
0036433309
-
Characterization of a Saccharomyces cerevisiae NADP(H)-dependent alcohol dehydrogenase (ADHVII), a member of the cinnamyl alcohol dehydrogenase family
-
Larroy C, Pares X, Biosca JA (2002) Characterization of a Saccharomyces cerevisiae NADP(H)-dependent alcohol dehydrogenase (ADHVII), a member of the cinnamyl alcohol dehydrogenase family. Eur J Biochem 269:5738-5745
-
(2002)
Eur J Biochem
, vol.269
, pp. 5738-5745
-
-
Larroy, C.1
Pares, X.2
Biosca, J.A.3
-
17
-
-
0037324788
-
Properties and functional significance of Saccharomyces cerevisiae ADHVI
-
Larroy C, Rosario Fernandez M, Gonzalez E, Pares X, Biosca JA (2003) Properties and functional significance of Saccharomyces cerevisiae ADHVI. Chem Biol Interact 143:229-238
-
(2003)
Chem Biol Interact
, vol.143
, pp. 229-238
-
-
Larroy, C.1
Rosario Fernandez, M.2
Gonzalez, E.3
Pares, X.4
Biosca, J.A.5
-
18
-
-
0000025835
-
Regulation of nitrogen utilization
-
Jones EW, Pringle JR, Broach JR (eds) Cold Spring Harbor Laboratory Press: Cold Spring Harbor, New York ISBN 0879693576
-
Magasanik B (1992) Regulation of nitrogen utilization. In: Jones EW, Pringle JR, Broach JR (eds) The molecular and cellular biology of the yeast Saccharomyces cerevisiae: gene expression. Cold Spring Harbor Laboratory Press: Cold Spring Harbor, New York pp. 283-318. ISBN 0879693576
-
(1992)
The Molecular and Cellular Biology of the Yeast Saccharomyces cerevisiae: Gene Expression
, pp. 283-318
-
-
Magasanik, B.1
-
19
-
-
0031962882
-
DNA chips: An array of possibilities
-
Marshall A, Hodgson J (1998) DNA chips: an array of possibilities. Nat Biotechnol 16:27-31
-
(1998)
Nat Biotechnol
, vol.16
, pp. 27-31
-
-
Marshall, A.1
Hodgson, J.2
-
20
-
-
0032508638
-
Glucose repression in Saccharomyces cerevisiae is related to the glucose concentration rather than the glucose flux
-
Meijer MM, Boonstra J, Verkleij AJ, Verrips CT (1998) Glucose repression in Saccharomyces cerevisiae is related to the glucose concentration rather than the glucose flux. J Biol Chem 273:24102-24107
-
(1998)
J Biol Chem
, vol.273
, pp. 24102-24107
-
-
Meijer, M.M.1
Boonstra, J.2
Verkleij, A.J.3
Verrips, C.T.4
-
21
-
-
0000876439
-
Prediction of flavor differences between beers from their chemical composition
-
Meilgaard MC (1982) Prediction of flavor differences between beers from their chemical composition. J Agric Food Chem 30:1009-1017
-
(1982)
J Agric Food Chem
, vol.30
, pp. 1009-1017
-
-
Meilgaard, M.C.1
-
22
-
-
0033983822
-
MIPS: A database for genomes and protein sequences
-
Mewes HW, Frishman D, Gruber C, Geier B, Haase D, Kaps A, Lemcke K, Mannhaupt G, Pfeiffer F, Schuller C, Stocker S, Weil B (2000) MIPS: a database for genomes and protein sequences. Nucl Acids Res 28:37-40
-
(2000)
Nucl Acids Res
, vol.28
, pp. 37-40
-
-
Mewes, H.W.1
Frishman, D.2
Gruber, C.3
Geier, B.4
Haase, D.5
Kaps, A.6
Lemcke, K.7
Mannhaupt, G.8
Pfeiffer, F.9
Schuller, C.10
Stocker, S.11
Weil, B.12
-
23
-
-
0026577439
-
Sequence of the GLN1 gene of Saccharomyces cerevisiae: Role of the upstream region in regulation of glutamine synthetase expression
-
Minehart PL, Magasanik B (1992) Sequence of the GLN1 gene of Saccharomyces cerevisiae: role of the upstream region in regulation of glutamine synthetase expression. J Bacteriol 174:1828-1836
-
(1992)
J Bacteriol
, vol.174
, pp. 1828-1836
-
-
Minehart, P.L.1
Magasanik, B.2
-
24
-
-
0034973590
-
Transcriptional profiling shows that Gcn4p is a master regulator of gene expression during amino acid starvation in yeast
-
Natarajan K, Meyer MR, Jackson BM, Slade D, Roberts C, Hinnebusch AG, Marton MJ (2001) Transcriptional profiling shows that Gcn4p is a master regulator of gene expression during amino acid starvation in yeast. Mol Cell Biol 21:4347-4368
-
(2001)
Mol Cell Biol
, vol.21
, pp. 4347-4368
-
-
Natarajan, K.1
Meyer, M.R.2
Jackson, B.M.3
Slade, D.4
Roberts, C.5
Hinnebusch, A.G.6
Marton, M.J.7
-
25
-
-
0024950028
-
Biochemical and molecular genetic aspects of pyruvate dehydrogenase complex from Saccharomyces cerevisiae
-
Reed LJ, Browning KS, Niu XD, Behal RH, Uhlinger DJ (1989) Biochemical and molecular genetic aspects of pyruvate dehydrogenase complex from Saccharomyces cerevisiae. Ann NY Acad Sci 573:155-167
-
(1989)
Ann NY Acad Sci
, vol.573
, pp. 155-167
-
-
Reed, L.J.1
Browning, K.S.2
Niu, X.D.3
Behal, R.H.4
Uhlinger, D.J.5
-
26
-
-
33644542088
-
Rapid identification of target genes for 3-methyl-1-butanol production in Saccharomyces cerevisiae
-
Schoondermark-Stolk SA, Jansen M, Veurink JH, Verkleij AJ, Verrips CT, Euverink GJ, Boonstra J, Dijkhuizen L (2006) Rapid identification of target genes for 3-methyl-1-butanol production in Saccharomyces cerevisiae. Appl Microbiol Biotechnol 70:237-246
-
(2006)
Appl Microbiol Biotechnol
, vol.70
, pp. 237-246
-
-
Schoondermark-Stolk, S.A.1
Jansen, M.2
Veurink, J.H.3
Verkleij, A.J.4
Verrips, C.T.5
Euverink, G.J.6
Boonstra, J.7
Dijkhuizen, L.8
-
27
-
-
17644366415
-
Bat2p is essential in Saccharomyces cerevisiae for fusel alcohol production on the non-fermentable carbon source ethanol
-
Schoondermark-Stolk SA, Tabernero M, Chapman J, Ter Schure EG, Verrips CT, Verkleij AJ, Boonstra J (2005) Bat2p is essential in Saccharomyces cerevisiae for fusel alcohol production on the non-fermentable carbon source ethanol. FEMS Yeast Res 5:757-766
-
(2005)
FEMS Yeast Res
, vol.5
, pp. 757-766
-
-
Schoondermark-Stolk, S.A.1
Tabernero, M.2
Chapman, J.3
Ter Schure, E.G.4
Verrips, C.T.5
Verkleij, A.J.6
Boonstra, J.7
-
28
-
-
1842834206
-
Identification of salt-induced genes of Zygosaccharomyces rouxii by using Saccharomyces cerevisiae GeneFilters
-
Schoondermark-Stolk SA, ter Schure EG, Verrips CT, Verkleij AJ, Boonstra J (2002) Identification of salt-induced genes of Zygosaccharomyces rouxii by using Saccharomyces cerevisiae GeneFilters. FEMS Yeast Res 2:525-532
-
(2002)
FEMS Yeast Res
, vol.2
, pp. 525-532
-
-
Schoondermark-Stolk, S.A.1
Ter Schure, E.G.2
Verrips, C.T.3
Verkleij, A.J.4
Boonstra, J.5
-
29
-
-
0031977975
-
Pyruvate decarboxylase catalyzes decarboxylation of branched-chain 2-oxo acids but is not essential for fusel alcohol production by Saccharomyces cerevisiae
-
ter Schure EG, Flikweert MT, Van Dijken JP, Pronk JT, Verrips CT (1998) Pyruvate decarboxylase catalyzes decarboxylation of branched-chain 2-oxo acids but is not essential for fusel alcohol production by Saccharomyces cerevisiae. Appl Environ Microbiol 64:1303-1307
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 1303-1307
-
-
Ter Schure, E.G.1
Flikweert, M.T.2
Van Dijken, J.P.3
Pronk, J.T.4
Verrips, C.T.5
-
30
-
-
0035942271
-
Significance analysis of microarrays applied to the ionizing radiation response
-
Tusher VG, Tibshirani R, Chu G (2001) Significance analysis of microarrays applied to the ionizing radiation response. Proc Natl Acad Sci USA 98:5116-5121
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 5116-5121
-
-
Tusher, V.G.1
Tibshirani, R.2
Chu, G.3
-
31
-
-
0034135542
-
Effect of threonine, cystathionine, and the branched-chain amino acids on the metabolism of Zygosaccharomyces rouxii
-
van der Sluis C, Wolken WA, Giuseppin ML, Tramper J, Wijffels RH (2000) Effect of threonine, cystathionine, and the branched-chain amino acids on the metabolism of Zygosaccharomyces rouxii. Enzyme Microb Technol 26:292-300
-
(2000)
Enzyme Microb Technol
, vol.26
, pp. 292-300
-
-
Van Der Sluis, C.1
Wolken, W.A.2
Giuseppin, M.L.3
Tramper, J.4
Wijffels, R.H.5
-
32
-
-
0041620271
-
Regulatory sequence analysis tools
-
van Helden J (2003) Regulatory sequence analysis tools. Nucl Acids Res 31:3593-3596
-
(2003)
Nucl Acids Res
, vol.31
, pp. 3593-3596
-
-
Van Helden, J.1
-
33
-
-
0030812783
-
Purification and characterization of a novel NADP-dependent branched-chain alcohol dehydrogenase from Saccharomyces cerevisiae
-
van Iersel MFM, Eppink MHM, van Berkel WJH, Rombouts FM, Abee T (1997) Purification and characterization of a novel NADP-dependent branched-chain alcohol dehydrogenase from Saccharomyces cerevisiae. Appl Environ Microbiol 63:4079-4082
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 4079-4082
-
-
Van Iersel, M.F.M.1
Eppink, M.H.M.2
Van Berkel, W.J.H.3
Rombouts, F.M.4
Abee, T.5
-
34
-
-
0037105443
-
HXT5 expression is determined by growth rates in Saccharomyces cerevisiae
-
Verwaal R, Paalman JW, Hogenkamp A, Verkleij AJ, Verrips CT, Boonstra J (2002) HXT5 expression is determined by growth rates in Saccharomyces cerevisiae. Yeast 19:1029-1038
-
(2002)
Yeast
, vol.19
, pp. 1029-1038
-
-
Verwaal, R.1
Paalman, J.W.2
Hogenkamp, A.3
Verkleij, A.J.4
Verrips, C.T.5
Boonstra, J.6
-
35
-
-
20444383083
-
Physiological characterization of the ARO10-dependent, broad-substrate- Specificity 2-oxo acid decarboxylase activity of Saccharomyces cerevisiae
-
Vuralhan Z, Luttik MAH, Tai SL, Boer VM, Morais MA, Schipper D, Almering MJH, Kötter P, Dickinson JR, Daran JM, Pronk JT (2005) Physiological characterization of the ARO10-dependent, broad-substrate- specificity 2-oxo acid decarboxylase activity of Saccharomyces cerevisiae. Appl Environ Microbiol 71:3276-3284
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 3276-3284
-
-
Vuralhan, Z.1
Luttik, M.A.H.2
Tai, S.L.3
Boer, V.M.4
Morais, M.A.5
Schipper, D.6
Almering, M.J.H.7
Kötter, P.8
Dickinson, J.R.9
Daran, J.M.10
Pronk, J.T.11
-
36
-
-
0042029541
-
Identification and characterization of phenylpyruvate decarboxylase genes in Saccharomyces cerevisiae
-
Vuralhan Z, Morais MA, Tai SL, Piper MD, Pronk JT (2003) Identification and characterization of phenylpyruvate decarboxylase genes in Saccharomyces cerevisiae. Appl Environ Microbiol 69:4534-4541
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 4534-4541
-
-
Vuralhan, Z.1
Morais, M.A.2
Tai, S.L.3
Piper, M.D.4
Pronk, J.T.5
|