Characterization of the tryptophan residues of human placental ribonuclease inhibitor and its complex with bovine pancreatic ribonuclease a by steady-state and time-resolved emission spectroscopy

Journal of Physical Chemistry B

Volumn 110, Issue 42, 2006, Pages 21349-21356

  Sardar, Pinki Saha ^a   Maity, Shyam Sundar ^a   Ghosh, Sanjib ^a   Chatterjee, Juin ^b   Maiti, Tushar Kanti ^b   Dasgupta, Swagata ^b  

^a PRESIDENCY UNIVERSITY   (India)

^b INDIAN INSTITUTE OF TECHNOLOGY   (India)

Author keywords

[No Author keywords available]

Indexed keywords

EMISSION SPECTROSCOPY; ENZYME INHIBITION; FLUORESCENCE; HYDROPHOBICITY; LOW TEMPERATURE PHENOMENA; PHOSPHORESCENCE;

BOVINE PANCREATIC RIBONUCLEASE; HETEROGENEOUS ENVIRONMENTS; HYDROPHOBIC REGION; TRYPTOPHAN (TRP) RESIDUES;

ENZYMES;

EID: 33751286976     PISSN: 15206106     EISSN: None     Source Type: Journal    
DOI: 10.1021/jp064832g     Document Type: Article

References (61)

1. Kobe, B.; Deisenhofer, J. J. Mol. Biol. 1996, 264, 1028-1043.
2. Blackburn, P.; Wilson, G.; Moore, S. J. Biol. Chem. 1977, 252, 5904-5910.
3. Ferreras, M.; Gavilanes, J. G.; Lopez-Otin, C.; Garcia- Segura, J. M. J. Biol. Chem. 1995, 270, 28570-28578.
4. Chatterjee, J.; Maiti, T. K.; Dasgupta S. Protein Pept. Lett. 2006, 13, 779-783.
5. Shapiro, R.; Vallee, B. L. Proc. Natl. Acad. Sci. U.S.A. 1987, 84, 2238-2241.
6. Blázquez, M.; Fominaya, J. M.; Hofsteenge, J. J. Biol. Chem. 1996, 271, 18638-18642.
7. Kim, B. M.; Schultz, L. W.; Raines, R. T. Protein Sci. 1999, 8, 430-434.
8. Mobile, V.; Russo, N.; Riordan, J. F. Biochemistry 1998, 37, 6857-6863.
9. Fett, J. W.; Olson, K. A.; Rybak, S. M. Biochemistry 1994, 33, 5421-5427.
10. Olson, K. A.; French, T. C.; Vallee, B. L.; Fett, J. W. Cancer Res. 1994, 54, 4576-4579.
11. Kobe, B.; Deisenhofer, J. Nature 1993, 366, 751-756.
12. Lee, F. S.; Fox, E. A.; Zhou, H.-M.; Strydom, D. J.; Vallee, B. L. Biochemistry 1988, 27, 8545-8553.
13. Hofsteenge, J.; Kiefer, B.; Matthies, B. A.; Stone, S. R. Biochemistry 1988, 27, 8537-8544.
14. Dickson, K. A.; Haigis, M. C.; Raina, R. T. Prog. Nucleic Acids Res. Mol. Biol. 2005, 80, 349-374.
15. Hofsteenge, J. In Ribonucleases: Structures and Functions; D'Alessio, G., Riordan, J. F., Eds.; Academic Press: New York, 1997; pp 621-658.
16. Lee, F. S.; Shapiro, R.; Vallee, B. L. Biochemistry 1989, 28, 225-230.
17. Shapiro, R.; Ruiz-Gutierrez, M.; Chen, C. Z. J. Mol. Biol. 2000, 302, 497-519.
18. Vicentini, A. M.; Keifer, B.; Matthias, R.; Meyhack, B.; Hemmings, B. A.; Stone, S. R.; Hofsteenge, J. Biochemistry 1990, 29, 8827-8834.
19. Papageorgiou, A. C.; Shapiro, R.; Acharya, K. R. EMBO J. 1997, 16, 5162-5177.
20. Maki, A. H. In Biological Magnetic Resonance; Berliner. L. J., Reuben J., Eds.; Plenum Press: New York, 1984; Vol. 6, pp 187-294.
21. Ghosh, S.; Zang, L.-H.; Maki, A. H. J. Chem. Phys 1988, 88, 2769-2775.
22. Ghosh, S.; Zang, L.-H.; Maki, A. H. Biochemistry 1988, 27, 7816-7820.
23. Ghosh, S.; Misra, A, Ozarowski, A.; Stuart, C.; Maki, A. H. Biochemistry 2001, 40, 15024-15030.
24. Ghosh, S.; Misra, A, Ozarowski, A.; Maki, A. H. J. Phys Chem. B 2003, 107, 11520-11526.
25. Hahn, D. K.; Callis, P. R. J. Phys. Chem. A 1997, 101, 2686-2691.
26. Galley, W. C.; Purkey, R. M. Proc. Natl. Acad. Sci. U.S.A. 1970. 67, 1116-1121.
27. Hershberger, M. V.; Maki, A. H.; Galley, W. C. Biochemistry 1980, 37, 2204-2209.
28. Ozarowski, A.; Barry, J. K.; Matthews, K. S.; Maki, A. H. Biochemistry 1999, 38, 6715-6722.
29. Zang, L.-H, Ghosh, S.; Maki, A. H. Biochemistry 1989, 28, 2245-2251.
30. Zang, L.-H.; Ghosh, S.; Maki, A. H. Biochemistry 1988, 27, 7816-7820.
31. Remington, S. J.; Anderson, W. F.; Owen, J.; Ten Eyck, L. F.; Grainger, C. T.; Matthews, B. W. J. Mol. Biol. 1978, 118, 81-98.
32. Lam, W. C.; Maki, A. H.; Itoh, T.; Hakoshima, T. Biochemistry 1992, 31, 6756-6760.
33. Hakoshima, T.; Itoh, T.; Tomita, K.J.; Gohda, K.; Nishikawa, S.; Morioka, H.; Uesugi, W.i.; Ohtsuka, E.; Ikehara, M. J. Mol. Biol. 1992, 225, 1013-1028.
34. Wu. J. Q.; Ozarowski, A.; Maki, A. H.; Urbaneja, M. A.; Henderson, L. E.; Casas-Finet, J. R. Biochemistry 1992, 36, 12506-12518.
35. De Guzman, R. N.; Wu, Z. R.; Stalling, C. C.; Pappalardo, L.; Borer, P. N.; Summers, M. F. Science 1998, 279, 384-388.
36. Maki, A. H. Professor Emeritus, Department of Chemistry, University of California at Davis, Davis, CA. Private communication.
37. Berman, H. M.; Westbrook, J.; Feng, Z.; Gilliland, G.; Bhat, T. N.; Shindyalov, I. N.; Bourne, P. E. The Protein Data Bank. Nucleic Acids Res. 2000, 28, 235-242.
38. Hubbard, S. J.; Thornton, J. M. NACCESS, Computer Program; Department of Biochemistry and Molecular Biology, University College London: London, 1993.
39. Vivian, J. T.; Callis P. R. Biophys. J. 2001, 80, 2093-2109.
40. Royer, C. A.; Gardner, J. A.; Beechem, J. M.; Brochon, J. C.; Matthews, K. S. Biophys. J. 1990 58, 363-378.
41. Lakowicz, J. R.; Cherek, H. J. Biol. Chem. 1981, 256, 6348-6353.
42. Lakowicz, J. R.; Balter, A. Photochem. Photobiol. 1982, 36, 125-132.
43. Lakowicz, J. R.; Balter, A. Biophys. Chem. 1982, 15, 353-360.
44. Szabo, A. G.; Rayner, D. M. J. Am. Chem. Soc. 1980, 102, 554-563.
45. Eftink, M. R. In Advances in Biophysical Chemistry; Bush, C. A., Ed.; JAI Press: Greenwich, CT, 1992; Vol.2, pp 81-114.
46. Purkey, R. M.; Galley, W. C. Biochemistry 1970, 9, 3569-3575.
47. (a) Förster, T. Zwischenmolekulare energiewanderung und fluoreszenz. Ann. Phys. (Leipzig) 1948, 2, 55-75.
48. (b) Förster, T. Discuss. Faraday. Soc. 1959, 27, 7-17.
49. Dexter, D. L. A theory of sensitized luminescence in solids. J. Chem. Phys. 1953, 21, 836-850.
50. Schlyer, B. D.; Steel, D. G.; Gafni, A. J. Biol. Chem. 1995, 270, 22890-22894.
51. Weber G. Biochem. J. 1960, 75, 335-345.
52. Song, P. S.; Kurtin, W. E. J. Am. Chem. Soc. 1969, 91, 4892-4906.
53. (a) Strickland E. H.; Billups, C. Biopolymers 1973, 12, 1989-1995.
54. (b) Tatischeff, I.; Klein, R.; Zemb, T.; Duquesne, M. Chem. Phys. Lett. 1978, 54, 394-398.
55. Yamamoto, Y.; Tanaka, J. Bull. Chem. Soc. Jpn. 1972, 45, 1362-1366.
56. Philips, L. A.; Levy, D. H. J. Chem. Phys. 1986, 85, 1327.
57. Von Shutz, J. U.; Zuclich, J. A.; Maki, A. H. J. Am. Chem. Soc. 1974, 96, 714-718.
58. Kwiram, A. L.; Ross, J. B. A. Annu. Rev. Biophys. Bioeng. 1982, 11, 223-249.
59. Stee, B.; Holtz, K. M.; Kantrowitz, E. R. J. Mol. Biol. 2000, 299, 1303-1311.
60. Li, Z.; Galley, W. C. Biophys. J. 1989, 56, 353-360.
61. Eftink, M. R.; Ramsay, G. D.; Burns, L.; Maki, A. H.; Mann, C. J.; Matthews, C. R.; Ghiron, C. A. Biochemistry 1993, 32, 9189-9198.