Molecular approaches in plant nematology;Approches moleculaires en phytonematologie

Fundamental and Applied Nematology

Volumn 20, Issue 1, 1997, Pages 1-14

  Jones, John T ^a   Phillips, Mark S ^a   Armstrong, Miles R ^a  

^a SCOTTISH CROP RESEARCH INSTITUTE   (United Kingdom)

Author keywords

DNA; molecular biology; nematode; protein

Indexed keywords

GOES; NEMATODA;

EID: 0031056041     PISSN: 11645571     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Review

References (64)

1. ARMSTRONG, M. R., PHILLIPS, M. S. & BLOCK, V. C. (1995). Mitochondrial DNA diversity in European populations of potato cyst nematodes. Abstr. Spring Meet. Brit. Soc. Parasit., Edinburgh, 1995 : 56 [Abstr.].
2. BAKKER, J., FOLKERSTMA, R. T., ROUPPE VAN DER VOORT, J. N. A. M., DE BOER, J. M. & GOMMERS, F. J. (1993). Changing concepts and molecular approaches in the managment of virulence genes in potato cyst nematodes. Ann. Rev. Phytopath., 31 : 161-190.
3. BAKKER, J. & GOMMERS, F. J. (1982). Differentiation of the potato cyst nematodes Globodera rostochiensis and G. pallida and of two G. rostochiensis pathotypes by means of two-dimensional electrophoresis. Proc. K. nederl. Akad. Wetensch., C 85 : 309-314.
4. BAKKER, J., SCHOTS, A., BOUWMAN-SMITS, L. & GOMMERS, F. J. (1988). Species specific and thermostable proteins from second stage larvae of Globodera rostochiensis and G. pallida. Phytopathology, 78 : 300-305.
5. BERGÉ, J.-B. & DALMASSO, A. (1975). Caractéristiques biochimiques de quelques populations de Meloidogyne hapla et Meloidogyne spp. Cah. ORSTOM, Sér. Biol., 10 : 263-271.
6. BERTIOLI, D., SMOKER, M., BROWN, A. C. P. & BURROWS, P. R. (1994). A method based on PCR for the construction of cDNA libraries and probes from small amounts of tissue. Biotechniques, 16 : 1054-1058.
7. BERTIOLI, D., SMOKER, M. & BURROWS, P. R. (1995). Use of differential display for cloning nematode responsive plant genes. Nematologica, 41 : 283 [Abstr.].
8. BESAL, E. A., POWERS, T. O., RADICE, A. D. & SANDALL, L. J. (1988). A DNA hybridisation probe for detection of soybean cyst nematode. Phytopathology, 78 : 1136-1139.
9. BIRCH, A. N. E., FENTON, B., MALLOCH, G., JONES, A. T., PHILLIPS, M. S., HARROWER, B. E., WOODFORD, J. A. T. & CATLEY, M. A. (1994). Ribosomal spacer length variability in the large raspberry aphid, Amphorophora idaei (Aphidinae : Macrosiphini). Insect molec. Biol., 3 : 239-245.
10. BIRD, A. F. (1964). Serological studies on the plant parasitic nematode Meloidogyne javanica. Expl Parasit., 15 : 350-360.
11. BROWN, W. M., GEORGE Jr, M. & WILSON, A. C. (1979). Rapid evolution of animal mitochondria. Proc. natn. Acad. Sci. USA, 76 : 1967-1971.
12. BUCK, L. & AXEL, R. (1991). A novel multigene family may encode odorant receptors : a molecular basis for odor recognition. Cell, 65 : 175-187.
13. BURROWS, P. R. (1988). Two cloned DNA fragments which differentiate Globodera pallida from G. rostochiensis. Abstr. ESN int. Nematol. Symp., Uppsala, Sweden, 7th-13th Aug. 1988 : 18 [Abstr.].
14. BURROWS, P. R. & BOFFEY, S. A. (1986). A technique for the extraction and restriction endonuclease digestion of total DNA from Globodera rostochiensis and G. pallida second stage juveniles. Revue Nematol., 9 : 199-200.
15. BURROWS, P. R. & PERRY, R. N. (1988). Two cloned DNA fragments which differentiate Globodera pallida from G. rostochiensis. Revue Nematol., 11 : 441-445.
16. CENIS, J. L. (1993). Identification of four major Meloidogyne species by random amplified polymorphic DNA (RAPD-PCR). Phytopathology, 83 : 76-80.
17. CHACON, M. R., PARKHOUSE, R. M. E., ROBINSON, M. P., BURROWS, P. R. & GARATE, T. (1991). A species specific oligonucleotide DNA probe for the identification of Meloidogyne incognita. Parasitology, 103 : 315-319.
18. CURRAN, J., BAILLIE, D. L. & WEBSTER, J. M. (1985). Use of restriction fragment length differences in genomic DNA to identify nematode species. Parasitology, 90 : 137-144.
19. CURRAN, J., MCCLURE, M. A. & WEBSTER, J. M. (1986). Genotypic analysis of Meloidogyne populations by detection of restriction fragment length differences in total DNA. J. Nematol., 18 : 83-86.
20. CURRAN, J. & ROBINSON, M. P. (1993). Molecular aids to nematode diagnosis. In : Evans, K., Trudgill, D. L. & Webster, J. M. (Eds). Plant parasitic nematodes in temperate agriculture. Wallingford, U.K. CAB International : 545-555.
21. DAVIES, K. & CARTER, B. (1995). A comparison of immunoassays for the quantification of nematodes extracted from sou. EPPO Bull., 25 : 367-375.
22. DE LUCA, F., DE GIORGI, C. & LAMBERTI, F. (1994). Cuticulin gene organisation in Meloidogyne artiella. In : Lamberti, F., De Giorgi, C. & Bird, D. Mck (Eds). Advances in molecular plant nematology. New York & London, Plenum Press : 85-89.
23. EVANS, K. (1995). Invited paper: Closing the gap between molecular biologists and traditional biologists. Nematologica, 41 : 385-394.
24. FARGETTE, M. (1987 a). Use of the esterase phenotype in the taxonomy of the genus Meloidogyne. 1. Stability of the esterase phenotype. Revue Nematol., 10 : 39-43.
25. FARGETTE, M. (1987 b). Use of the esterase phenotype in the taxonomy of the genus Meloidogyne. 2. Esterase phenotypes observed in West African populations and their characterisation. Revue Nematol., 10 : 45-56.
26. FERRIS, V. R., FERRIS, J. M. & FAGHIHI, J. (1993). Variation in spacer ribosomal DNA in some cyst forming species of plant parasitic nematodes. Fundam. appl. Nematol., 16 : 177-184.
27. FIRE, A., HARRISON, S. W. & DIXON, D. (1990). A modular set of lacZ fusion vectors for studying gene expression in Caenorhabditis elegans. Gene, 93 : 189-198.
28. FLEMING, C. C. & MARKS, R. J. (1983). The identification of the potato cyst nematodes Globodera rostochiensis and G. pallida by isoelectric focusing of proteins on polyacrylamide gels. Ann. appl. Biol., 103 : 277-281.
29. FLEMING, C. C. & POWERS, T. O. (1995). Sequence variation in the ribosomal DNA of Globodera rostochiensis and G. pallida. Nematologica, 41 : 300.
30. FOLKERTSMA, R. T., ROUPPE VAN DER VOORT, J. N. A. M., VAN GENT-PELZER, M. P. E., DE GROOT, K. E., VAN DEN BOS W. J. R., SCHOTS, A., BAKKER, J. & GOMMERS, F. J. (1994). Inter and intra specific variation between populations of Globodera rostochiensis and G. pallida revealed by random amplified polymorphic DNA. Phytopathology, 84 : 807-811.
31. FOX, P. C. & ATKINSON, H. J. (1984). Isoelectric focusing of general protein and specific enzymes from pathotypes of Globodera rostochiensis and G. pallida. Parasitology, 88 : 131-139.
32. FUJIMOTO, D. & KANAYA, S. (1973). Cuticulin : a noncollagen structural protein from Ascaris cuticle. Arch. Biochem. Biophys., 157 : 1-13.
33. GHEYSEN G., & VON MONTAGU, M. (1995). Plant/nematode interactions, a molecular biologists approach. Nematologica, 41 : 366-384.
34. GRUNDLER, F. M. W., BOCKENHOFF, A., SCHMIDT, K.-P., SOBCZAK, M., GOLINOWSKI, W. & WYSS, U. (1994). Arabadopsis thaliana and Heterodera schachtii : a versatile model to characterize the interaction between host plants and nematodes. In : Lamberti, F., De Giorgi, C. & Bird, D. Mck (Eds). Advances in molecular plant nematology. New York & London, Plenum Press : 171-181.
35. GURR, S. J., MCPHERSON, M. J., SCOLLAN, C., ATKINSON, H. J. & BOWLES, D. J. (1991). Gene expression in nematode infected plant roots. Molec. gen. Genet., 226 : 361-366.
36. HOPE, I. A. (1991). "Promoter trapping" in Caenorhabditis elegans. Development, 113 : 399-408.
37. JANSSEN, R., BAKKER, J. & GOMMERS, F. J. (1991). Mendelian proof for a gene for gene relationship between virulence of Globodera rostochiensis and the H1 resistance gene in Solanum tuberosum ssp. andigena CPC 1673. Revue Nématol., 14 : 213-219.
38. JONES, J. T. & PERRY, R. N. (1995). Analysis of gene expression during the hatching process in the potato cyst nematode Globodera rostochiensis using the differential display technique. Nematologica, 41 : 313 [Abstr.].
39. JONES, P., AMBLER, D. J. & ROBINSON, M. P. (1988). The application of monoclonal antibodies to the diagnosis of plant pathogens and pests. Pests & Dis., 2 : 767-776.
40. KELLY, T. W. & WILSON, A. C. (1991). Mode and tempo of molecular evolution in the nematode Caenorhabditis : Cytochrome oxidase II and calmodulin sequences. Genetics, 128 : 269-279.
41. KRAMER, J. M., COX, G. N. & HIRSH, D. (1982). Comparisons of the complete sequences of two collagen genes from Caenorhabdidtis elegans. Cell, 30 : 599-606.
42. LIANG, P. & PARDEE, A. B. (1992). Differential display of eukaryotic messenger RNA by means of the polymerase chain reaction. Science, 257 : 967-971.
43. LIBERT, F., PARMENTIER, M., LEFORT, A., DINSART, C., VAN SANDE, J., MAENHAUT, C., SIMONS, M.-J., DUMONT, J. E. & VASSART, G. (1989). Selective amplification and cloning of four new members of the G-protein coupled receptor family. Science, 244 : 569-572.
44. MARKS, R. J. & FLEMING, C. C. (1985). The use of isoelectric focusing as a tool in the identification and management of potato cyst nematode populations. EPPO Bull., 15 : 289-297.
45. MARTIN, G. B., WILLIAMS, J. G. K. & TANKSLEY, S. D. (1991). Rapid identification of markers linked to a Pseudomonas resistance gene in tomato by using random primers and near-isogenic lines. Proc. natn. Acad. Sci. USA, 188 : 2336-2340.
46. NGAI, J., DOWLING, M. M., BUCK, L. AXEL, R. & CHESS, A. (1993 a). The family of genes encoding odorant receptors in the channel catfish. Cell, 72 : 657-666.
47. NGAI, J., CHESS, A., DOWLING, M. M., NECLES, N. N., MACAGNO, E. R. & AXEL, R. (1993 b). Coding of olfactory information : topography of odorant receptor expression in the catfish olfactory epithelium. Cell, 72 : 667-680.
48. OKIMOTO, R., CHAMBERLAIN, H. M., MACFARLANE, J. L. & WOLSTENHOLME, D. R. (1991). Repeated sequence sets in mtDNA molecules of root knot nematodes (Meloidogyne) : Nucleotide sequence, genome location and potential for host race identification. Nucleic Acids Res., 19 : 1619-1626.
49. PASTRIK, K.-H., RUMPENHORST, H.-J. & BURGERMEISTER, W. (1995). Random amplified DNA analysis of a Globodera pallida population selected for virulence. Fundam. appl. Nematol., 18 : 109-114.
50. PALMER, H. M., ATKINSON, H. J. & PERRY, R. N. (1991). The use of DNA probes to identify Ditylenchus dipsaci. Revue Nématol., 14 : 625-628.
51. PHILLIPS, M. S., HARROWER, B. E., TRUDGILL, D. L., CATLEY, M. A. & WAUGH, R. (1992). Genetic variation in British populations of Globodera pallida as revealed by isozyme and DNA analyses. Nematologica, 38 : 304-319.
52. POWERS, T. O. & HARRIS, T. S. (1993). A polymerase chain reaction method for identification of five major Meloidogyne species. J. Nematol., 25 : 1-6.
53. RAY, C., ABBOT, A. G. & HUSSEY, R. S. (1994). Transsplicing of a Meloidogyne incognita mRNA encoding a putative esophageal gland protein. Mol. biochem. Parasit., 68 : 93-101.
54. SCHMIDT, K. P., GRUNDLER, F. M. W., DAVIES, K., BURROWS, P. & KAMMERLOHER, W. (1995). Characterisation of a root specific protein/gene responsive to cyst nematode infection. Nematologica, 41 : 340 [Abstr.].
55. SCHNICK, D., RUMPENHORST, H. J. & BURGERMEISTER, W. (1990). Differentiation of closely related Globodera pallida (Stone) populations by means of DNA restriction fragment length polymorphisms (RFLPs). J. Phytopath., 130 : 127-136.
56. SIMPSON, C. G., SAWBRIDGE, T. I., JENKINS, G. I. & BROWN, J. W. S. (1993). Expression analysis of multigene families by RT-PCR. Nucleic Acids Res., 20 : 5861-5862.
57. SOKOLOV, B. P. & PROCKOP, D. J. (1994). A rapid and simple PCR based method for isolation of cDNAs from differentially expressed genes. Nucleic Acids Res., 22 : 4009-4015.
58. TRUDGILL, D. L. & CARPENTER, J. M. (1971). Disc electrophoresis of proteins of Heterodera species and pathotypes of Heterodera rostochiensis. Ann. appl. Biol., 69 : 35-41.
59. VAWTER, L. & BROWN, W. M. (1986). Nuclear and mitochondrial DNA comparisons reveal extreme rate variation in the molecular clock. Science, 234 : 194-195.
60. VRAIN, T. C., WAKARCHUK, D. A., LEVESQUE, A. C. & HAMILTON, R. I. (1992). Intraspecific rDNA restriction fragment length polymorphism in the Xiphinema americanum group. Fundam. appl. Nematol., 15 : 563-573.
61. WAUGH, R. & POWELL, W. (1992). Using RAPD markers for crop improvement. TIBTECH, 10 : 186-190.
62. WELSH, J. & MCCLELLAND, M. (1990). Fingerprinting genomes using PCR with arbitrary primers. Nucleic Acids Res., 18 : 7215-7218.
63. WILLIAMS, J. G. K., KUBELK, A. R., LIVAK, K. J., RAFALSKI, J. A. & TINGEY, S. V. (1990). DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res., 18 : 6531-6535.
64. WILSON, M. A., BIRD, D. MCK. & VAN DER KNAAP, E. (1994). A comprehensive substractive cDNA cloning approach to identify nematode induced transcripts in tomato. Phytopathology, 84 : 299-303.