-
1
-
-
1542513556
-
Mobile Elements: Drivers of Genome Evolution
-
Kazazian HH Jr: Mobile Elements: Drivers of Genome Evolution. Science 2004, 303:1626-1632.
-
(2004)
Science
, vol.303
, pp. 1626-1632
-
-
Kazazian Jr., H.H.1
-
2
-
-
0035105221
-
Perspective: Transposable Elements, parasitic DNA, and Genome Evolution
-
Kidwell MG, Lisch DR: Perspective: Transposable Elements, parasitic DNA, and Genome Evolution. Evolution 2000, 55:1-24.
-
(2000)
Evolution
, vol.55
, pp. 1-24
-
-
Kidwell, M.G.1
Lisch, D.R.2
-
3
-
-
0032582489
-
Extended life-span and stress resistance in the Drosophila mutant methuselah
-
Lin YJ, Seroude L, Benzer S: Extended life-span and stress resistance in the Drosophila mutant methuselah. Science 1998, 282:943-946.
-
(1998)
Science
, vol.282
, pp. 943-946
-
-
Lin, Y.J.1
Seroude, L.2
Benzer, S.3
-
4
-
-
15544374910
-
The first steps of transposable elements invasion: Parasitic strategy vs. genetic drift
-
Le Rouzic A, Capy P: The first steps of transposable elements invasion: parasitic strategy vs. genetic drift. Genetics 2005, 169:1033-1043.
-
(2005)
Genetics
, vol.169
, pp. 1033-1043
-
-
Le Rouzic, A.1
Capy, P.2
-
5
-
-
0037172977
-
A cytosine methyl-transferase homologue is essential for repeat-induced point mutation in Neurospora crassa
-
Freitag M, Williams R, Kothe GO, Selker EU: A cytosine methyl-transferase homologue is essential for repeat-induced point mutation in Neurospora crassa. Proc Natl Acad Sci 2002, 99:8802-8807.
-
(2002)
Proc Natl Acad Sci
, vol.99
, pp. 8802-8807
-
-
Freitag, M.1
Williams, R.2
Kothe, G.O.3
Selker, E.U.4
-
6
-
-
0027450385
-
Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: A mechanism for non-LTR retrotransposition
-
Luan DD, Korman MH, Jakubczak JL, Eickbush TH: Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: a mechanism for non-LTR retrotransposition. Cell 1993, 72:595-605.
-
(1993)
Cell
, vol.72
, pp. 595-605
-
-
Luan, D.D.1
Korman, M.H.2
Jakubczak, J.L.3
Eickbush, T.H.4
-
7
-
-
0029616336
-
Mechanisms of Intron Mobility
-
Belfort M, Perlman PS: Mechanisms of Intron Mobility. J Biol Chem 1995, 270:30237-30240.
-
(1995)
J Biol Chem
, vol.270
, pp. 30237-30240
-
-
Belfort, M.1
Perlman, P.S.2
-
8
-
-
0037015614
-
Genome sequence of the human malaria parasite Plasmodium falciparum
-
Gardner MJ, Hall N, Fung E, White O, Berriman M, Hyman RW, Carlton JM, Pain A, Nelson KE, Bowman S, Paulsen IT, James K, Eisen JA, Rutherford K, Salzberg SL, Craig A, Kyes S, Chan M-S, Nene V, Shallom SJ, Suh B, Peterson J, Angiuoli S, Pertea M, Allen J, Selengut J, Haft D, Mather MW, Vaidya AB, Martin DMA, Fairlamb AH, Fraunholz MJ, Roos DS, Ralph SA, McFadden GI, Cummings LM, Subramanian GM, Mungall C, Venter JC, Carucci DJ, Hoffman SL, Newbold C, Davis RW, Fraser CM, Barrell B: Genome sequence of the human malaria parasite Plasmodium falciparum. Nature 2002, 419:498-518.
-
(2002)
Nature
, vol.419
, pp. 498-518
-
-
Gardner, M.J.1
Hall, N.2
Fung, E.3
White, O.4
Berriman, M.5
Hyman, R.W.6
Carlton, J.M.7
Pain, A.8
Nelson, K.E.9
Bowman, S.10
Paulsen, I.T.11
James, K.12
Eisen, J.A.13
Rutherford, K.14
Salzberg, S.L.15
Craig, A.16
Kyes, S.17
Chan, M.-S.18
Nene, V.19
Shallom, S.J.20
Suh, B.21
Peterson, J.22
Angiuoli, S.23
Pertea, M.24
Allen, J.25
Selengut, J.26
Haft, D.27
Mather, M.W.28
Vaidya, A.B.29
Martin, D.M.A.30
Fairlamb, A.H.31
Fraunholz, M.J.32
Roos, D.S.33
Ralph, S.A.34
McFadden, G.I.35
Cummings, L.M.36
Subramanian, G.M.37
Mungall, C.38
Venter, J.C.39
Carucci, D.J.40
Hoffman, S.L.41
Newbold, C.42
Davis, R.W.43
Fraser, C.M.44
Barrell, B.45
more..
-
9
-
-
0037015592
-
Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii
-
Carlton JM, Angiuoli SV, Suh BB, Kooij TW, Pertea M, Silva JC, Ermolaeva MD, Allen JE, Selengut JD, Koo HL, Peterson JD, Pop M, Kosack DS, Shumway MF, Bidwell SL, Shallom SJ, van Aken SE, Riedmuller SB, Feldblyum TV, Cho JK, Quackenbush J, Sedegah M, Shoaibi A, Cummings LM, Florens L, Yates JR, Raine JD, Sinden RE, Harris MA, Cunningham DA, Preiser PR, Bergman LW, Vaidya AB, van Lin LH, Janse CJ, Waters AP, Smith HO, White OR, Salzberg SL, Venter JC, Fraser CM, Hoffman SL, Gardner MJ, Carucci DJ: Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii. Nature 2002, 419:512-519.
-
(2002)
Nature
, vol.419
, pp. 512-519
-
-
Carlton, J.M.1
Angiuoli, S.V.2
Suh, B.B.3
Kooij, T.W.4
Pertea, M.5
Silva, J.C.6
Ermolaeva, M.D.7
Allen, J.E.8
Selengut, J.D.9
Koo, H.L.10
Peterson, J.D.11
Pop, M.12
Kosack, D.S.13
Shumway, M.F.14
Bidwell, S.L.15
Shallom, S.J.16
van Aken, S.E.17
Riedmuller, S.B.18
Feldblyum, T.V.19
Cho, J.K.20
Quackenbush, J.21
Sedegah, M.22
Shoaibi, A.23
Cummings, L.M.24
Florens, L.25
Yates, J.R.26
Raine, J.D.27
Sinden, R.E.28
Harris, M.A.29
Cunningham, D.A.30
Preiser, P.R.31
Bergman, L.W.32
Vaidya, A.B.33
van Lin, L.H.34
Janse, C.J.35
Waters, A.P.36
Smith, H.O.37
White, O.R.38
Salzberg, S.L.39
Venter, J.C.40
Fraser, C.M.41
Hoffman, S.L.42
Gardner, M.J.43
Carucci, D.J.44
more..
-
10
-
-
0031932446
-
Plasmodium falciparum Telomerase: De Novo Telomere Addition to Telomeric and Nontelomeric Sequences and Role in Chromosome Healing
-
Bottius E, Bakhsis N, Scherf A: Plasmodium falciparum Telomerase: De Novo Telomere Addition to Telomeric and Nontelomeric Sequences and Role in Chromosome Healing. Mol Cell Biol 1998, 18:919-925.
-
(1998)
Mol Cell Biol
, vol.18
, pp. 919-925
-
-
Bottius, E.1
Bakhsis, N.2
Scherf, A.3
-
11
-
-
22344436540
-
Identification of the gene sequence of telomerase catalytic subunit in Plasmodium falciparum
-
Rubiano CC, Wasserman M: Identification of the gene sequence of telomerase catalytic subunit in Plasmodium falciparum. Biomedica 2005, 25:87-100.
-
(2005)
Biomedica
, vol.25
, pp. 87-100
-
-
Rubiano, C.C.1
Wasserman, M.2
-
12
-
-
14844304405
-
The unusually large Plasmodium telomerase reverse transcriptase localizes in a discrete compartment associated with the nucleolus
-
Figueiredo LM, Rocha EPC, Mancio-Silva L, Prevost C, Hernandez-Verdun D, Scherf A: The unusually large Plasmodium telomerase reverse transcriptase localizes in a discrete compartment associated with the nucleolus. Nucleic Acids Res 2005, 33:1111-1122.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 1111-1122
-
-
Figueiredo, L.M.1
Rocha, E.P.C.2
Mancio-Silva, L.3
Prevost, C.4
Hernandez-Verdun, D.5
Scherf, A.6
-
13
-
-
0032548801
-
Alu elements in a Plasmodium vivax antigen gene
-
Dhar A, Gupta S, Sharma YD: Alu elements in a Plasmodium vivax antigen gene. FEBS Lett 1998, 423:193-197.
-
(1998)
FEBS Lett
, vol.423
, pp. 193-197
-
-
Dhar, A.1
Gupta, S.2
Sharma, Y.D.3
-
14
-
-
0033972531
-
Genomic organization and chromatin structure of Plasmodium falciparum chromosome ends
-
Figueiredo LM, Pirrit LA, Scherf A: Genomic organization and chromatin structure of Plasmodium falciparum chromosome ends. Mol Biochem Parasitol 2000, 106:169-174.
-
(2000)
Mol Biochem Parasitol
, vol.106
, pp. 169-174
-
-
Figueiredo, L.M.1
Pirrit, L.A.2
Scherf, A.3
-
18
-
-
84872276846
-
-
The Institute for Genome Research
-
The Institute for Genome Research [http://www.tigr.org]
-
-
-
-
19
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Meyers EW, Lipman DJ: Basic local alignment search tool. J Mol Biol 1990, 215:403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Meyers, E.W.4
Lipman, D.J.5
-
20
-
-
0004336511
-
DNA methylation at asymmetric sites is associated with numerous transition mutations
-
Selker EU, Stevens JN: DNA methylation at asymmetric sites is associated with numerous transition mutations. Proc Natl Acad Sci USA 1985, 82:8114-8118.
-
(1985)
Proc Natl Acad Sci USA
, vol.82
, pp. 8114-8118
-
-
Selker, E.U.1
Stevens, J.N.2
-
21
-
-
0024361901
-
Repeat-induced GC to AT mutations in Neurospora
-
Cambareri EB, Jensen BC, Schabtach E, Selker EU: Repeat-induced GC to AT mutations in Neurospora. Science 1989, 244:1571-1575.
-
(1989)
Science
, vol.244
, pp. 1571-1575
-
-
Cambareri, E.B.1
Jensen, B.C.2
Schabtach, E.3
Selker, E.U.4
-
22
-
-
0037464589
-
The genome sequence of the filamentous fungus Neurospora crassa
-
Galagan JE, Calvo SE, Borkovich KA, Selker EU, Read ND, Jaffe D, FitzHugh W, Ma L-J, Smirnov S, Purcell S, Rehman B, Elkins T, Engels R, Wang S, Nielsen CB, Butler J, Endrizzi M, Qui D, Ianakiev P, Bell-Pedersen D, Nelson MA, Werner-Washburne M, Selitrennikoff CP, Kinsey JA, Braun EL, Zelter A, Schulte U, Kothe GO, Jedd G, Mewes W, Staben C, Marcotte E, Greenberg D, Roy A, Foley K, Naylor J, Stange-Thomann N, Barrett R, Gnerre S, Kamal M, Kamvysselis M, Mauceli E, Bielke C, Rudd S, Frishman D, Krystofova S, Rasmussen C, Metzenberg RL, Perkins DD, Kroken S, Cogoni C, Macino G, Catcheside D, Li W, Pratt RJ, Osmani SA, DeSouza CPC, Glass L, Orbach MJ, Berglund JA, Voelker R, Yarden O, Plamann M, Seiler S, Dunlap J, Radford A, Aramayo R, Natvig DO, Alex LA, Mannhaupt G, Ebbole DJ, Freitag M, Paulsen I, Sachs MS, Lander ES, Nusbaum C, Birren B: The genome sequence of the filamentous fungus Neurospora crassa. Nature 2003, 422:859-868.
-
(2003)
Nature
, vol.422
, pp. 859-868
-
-
Galagan, J.E.1
Calvo, S.E.2
Borkovich, K.A.3
Selker, E.U.4
Read, N.D.5
Jaffe, D.6
FitzHugh, W.7
Ma, L.-J.8
Smirnov, S.9
Purcell, S.10
Rehman, B.11
Elkins, T.12
Engels, R.13
Wang, S.14
Nielsen, C.B.15
Butler, J.16
Endrizzi, M.17
Qui, D.18
Ianakiev, P.19
Bell-Pedersen, D.20
Nelson, M.A.21
Werner-Washburne, M.22
Selitrennikoff, C.P.23
Kinsey, J.A.24
Braun, E.L.25
Zelter, A.26
Schulte, U.27
Kothe, G.O.28
Jedd, G.29
Mewes, W.30
Staben, C.31
Marcotte, E.32
Greenberg, D.33
Roy, A.34
Foley, K.35
Naylor, J.36
Stange-Thomann, N.37
Barrett, R.38
Gnerre, S.39
Kamal, M.40
Kamvysselis, M.41
Mauceli, E.42
Bielke, C.43
Rudd, S.44
Frishman, D.45
Krystofova, S.46
Rasmussen, C.47
Metzenberg, R.L.48
Perkins, D.D.49
Kroken, S.50
Cogoni, C.51
Macino, G.52
Catcheside, D.53
Li, W.54
Pratt, R.J.55
Osmani, S.A.56
DeSouza, C.P.C.57
Glass, L.58
Orbach, M.J.59
Berglund, J.A.60
Voelker, R.61
Yarden, O.62
Plamann, M.63
Seiler, S.64
Dunlap, J.65
Radford, A.66
Aramayo, R.67
Natvig, D.O.68
Alex, L.A.69
Mannhaupt, G.70
Ebbole, D.J.71
Freitag, M.72
Paulsen, I.73
Sachs, M.S.74
Lander, E.S.75
Nusbaum, C.76
Birren, B.77
more..
-
23
-
-
28544445987
-
Silencing of retrotransposons in Dictyostelium by DNA methylation and RNAi
-
Kuhlmann M, Borisova BE, Kaller M, Larsson P, Stach D, Na J, Eichinger L, Lyko F, Ambros V, Söderbom F, Hammann C, Nellen W: Silencing of retrotransposons in Dictyostelium by DNA methylation and RNAi. Nucleic Acids Res 2005, 33:6405-6417.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 6405-6417
-
-
Kuhlmann, M.1
Borisova, B.E.2
Kaller, M.3
Larsson, P.4
Stach, D.5
Na, J.6
Eichinger, L.7
Lyko, F.8
Ambros, V.9
Söderbom, F.10
Hammann, C.11
Nellen, W.12
-
24
-
-
0032584202
-
Mariner transposition and transformation of the yellow fever mosquito, Aedes aegypti
-
Coates CJ, Jasinskiene N, Miyashiro L, James AA: Mariner transposition and transformation of the yellow fever mosquito, Aedes aegypti. Proc Natl Acad Sci USA 1998, 95:3748-3751.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 3748-3751
-
-
Coates, C.J.1
Jasinskiene, N.2
Miyashiro, L.3
James, A.A.4
-
25
-
-
0030848018
-
Telomerase and Retrotransposons: Which Came First?
-
Eickbush TH: Telomerase and Retrotransposons: Which Came First? Science 1997, 277:911-912.
-
(1997)
Science
, vol.277
, pp. 911-912
-
-
Eickbush, T.H.1
-
26
-
-
0028181441
-
Hidden Markov models in computational biology: Applications to protein modeling
-
Krogh A, Brown M, Mian IS, Sjolander K, Haussler D: Hidden Markov models in computational biology: applications to protein modeling. J Mol Biol 1994, 235:1501-1531.
-
(1994)
J Mol Biol
, vol.235
, pp. 1501-1531
-
-
Krogh, A.1
Brown, M.2
Mian, I.S.3
Sjolander, K.4
Haussler, D.5
-
27
-
-
0029937428
-
Hidden Markov Models
-
Eddy SR: Hidden Markov Models. Curr Opin Struct Biol 1996, 6:361-365.
-
(1996)
Curr Opin Struct Biol
, vol.6
, pp. 361-365
-
-
Eddy, S.R.1
-
28
-
-
84872272752
-
-
The HMMER Homepage
-
The HMMER Homepage [http://hmmer.janelia.org]
-
-
-
-
30
-
-
0030938901
-
Reverse Transcriptase Motifs in the Catalytic Subunit of Telomerase
-
Lingner J, Hughes TR, Shevchenko A, Mann M, Lundblad V, Cech TR: Reverse Transcriptase Motifs in the Catalytic Subunit of Telomerase. Science 1997, 276:561-567.
-
(1997)
Science
, vol.276
, pp. 561-567
-
-
Lingner, J.1
Hughes, T.R.2
Shevchenko, A.3
Mann, M.4
Lundblad, V.5
Cech, T.R.6
-
31
-
-
0025006614
-
Origin and evolution of retroelements based on their reverse transcriptase sequences
-
Xiong Y, Eickbush TH: Origin and evolution of retroelements based on their reverse transcriptase sequences. EMBO J 1990, 9:3353-3362.
-
(1990)
EMBO J
, vol.9
, pp. 3353-3362
-
-
Xiong, Y.1
Eickbush, T.H.2
-
32
-
-
84872273053
-
-
The European Bioinformatics Institute
-
The European Bioinformatics Institute [http://www.ebi.ac.uk/emboss]
-
-
-
-
33
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson J, Higgins D, Gibson T: CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 1994, 22:4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.1
Higgins, D.2
Gibson, T.3
-
34
-
-
0038404518
-
The Plasmodium vivax genome sequencing project
-
Carlton JM: The Plasmodium vivax genome sequencing project. Trends Parasitol 2003, 19:227-231.
-
(2003)
Trends Parasitol
, vol.19
, pp. 227-231
-
-
Carlton, J.M.1
-
35
-
-
84872277836
-
-
The Human Genome Sequencing Center
-
The Human Genome Sequencing Center [http://www.hgsc.bcm.tmc.edu]
-
-
-
|