Spectroscopic characterization of a high-potential lipo-cupredoxin found in Streptomyces coelicolor

Journal of the American Chemical Society

Volumn 128, Issue 45, 2006, Pages 14579-14589

  Worrall, Jonathan A R ^a,b   Machczynski, Michael C ^a   Keijser, Bart J F ^a   Di Rocco, Giulia ^a   Ceola, Stefano ^a   Ubbink, Marcellus ^a   Vijgenboom, Erik ^a   Canters, Gerard W ^a  

^a LEIDEN UNIVERSITY   (Netherlands)

^b UNIVERSITY OF CAMBRIDGE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

CHARACTERIZATION; COPPER; GENES; PARAMAGNETIC RESONANCE; PROTEINS; SPECTROSCOPIC ANALYSIS;

LIGANDS; LIPOPROTEIN; PARAMAGNETIC RESONANCE SPECTROSCOPIES; STREPTOMYCES COELICOLOR;

BACTERIA;

AMICYANIN; BINDING PROTEIN; COBALT; COPPER; COPPER ION; CUPRIC ION; GENE PRODUCT; HISTIDINE; LIGAND; LIPOCUPREDOXIN; LIPOPROTEIN; METAL; METHIONINE; SIGNAL PEPTIDE; UNCLASSIFIED DRUG;

AMINO TERMINAL SEQUENCE; ARTICLE; BACTERIAL GENOME; BINDING SITE; BIOAVAILABILITY; CELL STRUCTURE; ELECTRIC POTENTIAL; ELECTRON SPIN RESONANCE; ESCHERICHIA COLI; HETEROLOGOUS EXPRESSION; MOLECULAR CLONING; MOLECULAR INTERACTION; NONHUMAN; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; NUCLEOTIDE SEQUENCE; PH; PH ELECTRODE; PROTEIN ANALYSIS; PROTEIN DOMAIN; PROTEIN FAMILY; PROTEIN FUNCTION; PROTEIN MOTIF; PROTEIN STRUCTURE; PROTON TRANSPORT; SPECTROSCOPY; STREPTOMYCES COELICOLOR; STREPTOMYCETACEAE;

AMINO ACID SEQUENCE; AZURIN; BASE SEQUENCE; CLONING, MOLECULAR; DNA PRIMERS; ELECTRON SPIN RESONANCE SPECTROSCOPY; ELECTROPHORESIS, POLYACRYLAMIDE GEL; HYDROGEN-ION CONCENTRATION; MAGNETIC RESONANCE SPECTROSCOPY; MOLECULAR SEQUENCE DATA; SEQUENCE HOMOLOGY, AMINO ACID; SPECTROPHOTOMETRY, ULTRAVIOLET; STREPTOMYCES COELICOLOR;

EID: 33750966459     PISSN: 00027863     EISSN: None     Source Type: Journal    
DOI: 10.1021/ja064112n     Document Type: Article

References (89)

1. Dionigi, C. P.; Ahten, T. S.; Wartelle, L. H. J. Indust. Microbiol. 1996, 17, 84-88.
2. Keijser, B. J. F.; van Wezel, G. P.; Canters, G. W.; Kieser, T.; Vijgenboom, E. J. Mol. Microbiol. Biotechnol. 2000, 2, 565-574.
3. Kieser, T.; Hopwood, D. A. Methods Enzymol. 1991, 204, 430-458.
4. Ueda, K.; Tomaru, Y.; Endoh, K.; Beppu, T. J. Antibiot. 1997, 50, 693-695.
5. Fontecave, M.; Pierre, J. L. Coord. Chem. Rev. 1998, 170, 125-140.
6. Messerschmidt, A. Struct. Bonding 1998, 90, 38-68.
7. Sykes, A. G. Adv. Inorg. Chem. 1991, 36, 377-408.
8. Banci, L.; Rosato, A. Acc. Chem. Res. 2003, 36, 215-221.
9. Bertinato, J.; L'Abbe, M. R. J. Nutr. Biochem. 2004, 15, 316-322.
10. Harrison, M. D.; Jones, C. E.; Solioz, M.; Dameron, C. T. Trends Biochem. Sci, 2000, 25, 29-32.
11. Huffman, D. L.; O'Halloran, T. V. Annu. Rev. Biochem. 2001, 70, 677-701.
12. Solomon, E. I.; Baldwin, M. J.; Lowery, M. D. Chem. Rev. 1992, 92, 521-542.
13. Solomon, E. I.; Sundaram, U. M.; Machonkin, T. E. Chem. Rev. 1996, 96, 2563-2605.
14. Solomon, E. I.; Szilagyi, R. K.; George, S. D.; Basumallick, E. Chem. Rev. 2004, 104, 419-458.
15. Bentley, S. D.; et.al. Nature (London) 2002, 417, 141-147.
16. Keijser, B. J. F. Ph.D. Thesis, University of Leiden, The Netherlands, 2003.
17. Machczynski, M. C.; Vijgenboom, E.; Samyn, B.; Canters, G. W. Protein Sci. 2004, 13, 2388-2397.
18. Canters, G. W.; Gilardi, G. FEBS Lett. 1993, 325, 39-48.
19. Bertini, I.; Ciurli, S.; Dikiy, A.; Gasanov, R.; Luchinat, C.; Martini, G.; Safarov, N. J. Am. Chem. Soc. 1999, 121, 2037-2046.
20. Bertini, I.; Fernandez, C. O.; Karlsson, B. G.; Leckner, J.; Luchinat, C.; Malmstrom, B. G.; Nersissian, A. M.; Pierattelli, R.; Shipp, E.; Valentine, J. S.; Vila, A. J. J. Am. Chem. Soc. 2000, 122, 3701-3707.
21. Dennison, C.; Kohzuma, T. Inorg. Chem. 1999, 38, 1491-1497.
22. Dennison, C.; Harrison, M. D. J. Am. Chem. Soc. 2004, 126, 2481-2489.
23. Donaire, A.; Jimenez, B.; Fernandez, C. O.; Pierattelli, R.; Niizeki, T.; Moratal, J. M.; Hall, J. F.; Kohzuma, T.; Hasnain, S. S.; Vila, A. J. J. Am. Chem. Soc. 2002, 124, 13698-13708.
24. Fernandez, C. O.; Sannazzaro, A. I.; Vila, A. J. Biochemistry 1997, 36, 10566-10570.
25. Kalverda, A. P.; Salgado, J.; Dennison, C.; Canters, G. W. Biochemistry 1996, 35, 3085-3092.
26. Salgado, J.; Kroes, S. J.; Berg, A.; Moratal, J. M.; Canters, G. W. J. Biol. Chem. 1998, 273, 177-185.
27. Vila, A. J.; Ramirez, B. E.; DiBilio, A. J.; Mizoguchi, T. J.; Richards, J. H.; Gray, H. B. Inorg. Chem. 1997, 36, 4567-4570.
28. Sato, K.; Dennison, C. Biochemistry 2002, 41, 120-130.
29. LaCroix, L. B.; Randall, D. W.; Nersissian, A. M.; Hoitink, C. W. G.; Canters, G. W.; Valentine, J. S.; Solomon, E. I. J. Am. Chem. Soc. 1998, 120, 9621-9631.
30. Randall, D. W.; Gamelin, D. R.; LaCroix, L. B.; Solomon, E. I. J. Biol. Inorg. Chem. 2000, 5, 16-29.
31. van Gastel, M.; Canters, G. W.; Krupka, H.; Messerschmidt, A.; de Waal, E. C.; Warmerdam, G. C. M.; Groenen, E. J. J. J. Am. Chem. Soc. 2000, 122, 2322-2328.
32. Bull, P. C.; Cox, D. W. Trends Genet. 1994, 10, 246-252.
33. Castresana, J.; Lubben, M.; Saraste, M.; Higgins, D. G. EMBO J. 1994, 13, 2516-2525.
34. Jungmann, J.; Reins, H. A.; Lee, J. W.; Romeo, A.; Hassett, R.; Kosman, D.; Jentsch, S. EMBO J. 1993, 12, 5051-5056.
35. Ouzounis, C.; Sander, C. FEBS Lett. 1991, 279, 73-78.
36. Messerschmidt, A.; Huber, R. Eur. J. Biochem. 1990, 187, 341-352.
37. Southan, C.; Kruse, L. I. FEBS Lett. 1989, 255, 116-120.
38. Altschul, S. F.; Gish, W.; Miller, W.; Myers, E. W.; Lipman, D. J. J. Mol. Biol. 1990, 215, 403-410.
39. Bateman, A.; Birney, E.; Cerruti, L.; Durbin, R.: Etwiller, L.; Eddy, S. R.; Griffiths-Jones, S.; Howe, K. L.; Marshall, M.; Sonnhammer, E. L. L. Nucleic Acids Res. 2002, 30, 276-280.
40. Bendtsen, J. D.; Nielsen, H.; von Heijne, G.; Brunak, S. J. Mol. Biol. 2004, 340, 783-795.
41. Juncker, A. S.; Willenbrock, H.; von Heijne, G.; Brunak, S.; Nielsen, H.; Krogh, A. Protein Sci. 2003, 12, 1652-1662.
42. Snel, B.; Lehmann, G.; Bork, P.; Huynen, M. A. Nucleic Acids Res. 2000, 28, 3442-3444.
43. Mead, D. A.; Szczesna-Skorupa, E.; Kemper, B. Protein Eng. 1986, 1, 67-74.
44. Hagen, W. R. Eur. J. Biochem. 1989, 182, 523-530.
45. Inubushi, T.; Becker, E. D. J. Magn. Reson. 1983, 51, 128-133.
46. Void, R. L.; Waugh, J. S.; Klein, M. P.; Phelps, D. E. J. Chem. Phys. 1968, 48, 3831
47. Campbell, I. D.; Dobson, C. M.; Williams, R. J. P.; Wright, P. E. FEBS Lett. 1975, 57, 96-99.
48. Hayashi, S.; Wu, H. C. J. Bioenerg. Biomembr. 1990, 22, 451-471.
49. Inouye, S.; Franceschini, T.; Sato, M.; Itakura, K.; Inouye, M. EMBO J. 1983, 2, 87-91.
50. Pollitt, S.; Inouye, S.; Inouye, M. J. Biol. Chem. 1986, 261, 1835-1837.
51. Sankaran, K.; Wu, H. C. J. Biol. Chem. 1994, 269, 19701-19706.
52. Jones, D. T. J. Mol. Biol. 1999, 287, 797-815.
53. Brenner, A. J.; Harris, E. D. Anal. Biochem. 1995, 226, 80-84.
54. Battistuzzi, G.; Borsari, M.; Canters, G. W.; de Waal, E.; Leonardi, A.; Ranieri, A.; Sola, M. Biochemistry 2002, 41, 14293-14298.
55. Ingledew, W. J.; Cobley, J. G. Biochim. Biophys. Acta 1980, 590, 141-158.
56. Lappin, A. G.; Lewis, C. A.; Ingledew, W. J. Inorg. Chem. 1985, 24, 1446-1450.
57. Sykes, A. G. Struct. Bonding (Berlin) 1991, 75, 175-224.
58. Jeuken, L. J. C.; Camba, R.; Armstrong, F. A.; Canters, G. W. J. Biol. Inorg. Chem. 2002, 7, 94-100.
59. Guss, J. M.; Harrowell, P. R.; Murata, M.; Morris, V. A.; Freeman, H. C. J. Mol. Biol. 1986, 192, 361-387.
60. Dennison, C.; Sato, K. Inorg. Chem. 2002, 41, 6662-6672.
61. Dennison, C.; Sato, K. Inorg. Chem. 2004, 43, 1502-1510.
62. Fernandez, C. O.; Niizeki, T.; Kohzuma, T.; Vila, A. J. J. Biol. Inorg. Chem. 2003, 8, 75-82.
63. Salgado, J.; Jimenez, H. R.; Donaire, A.; Moratal, J. M. Eur. J. Biochem. 1995, 231, 358-369.
64. Salgado, J.; Kalverda, A. P.; Diederix, R. E. M.; Canters, G. W.; Moratal, J. M.; Lawler, A. T.; Dennison, C. J. Biol. Inorg. Chem. 1999, 4, 457-467.
65. Vila, A. J.; Fernandez, C. O. J. Am. Chem. Soc. 1996, 118, 7291-7298.
66. Ubbink, M.; Worrall, J. A. R.; Canters, G. W.; Groenen, E. J. J.; Huber, M. Annu. Rev. Biophys. Biomol. Struct. 2002, 31, 393-422.
67. Donaire, A.; Jimenez, B.; Moratal, J. M.; Hall, J. F.; Hasnain, S. S. Biochemistry 2001, 40, 837-846.
68. Donaire, A.; Salgado, J.; Moratal, J. M. Biochemistry 1998, 37, 8659-8673.
69. Guss, J. M.; Merritt, E. A.; Phizackerley, R. P.; Freeman, H. C. J. Mol. Biol. 1996, 262, 686-705.
70. Machonkin, T. E.; Zhang, H. H.; Hedman, B.; Hodgson, K. O.; Solomon, E. I. Biochemistry 1998, 37, 9570-9578.
71. Palmer, A. E.; Randall, D. W.; Xu, F.; Solomon, E. I. J. Am. Chem. Soc. 1999, 121, 7138-7149.
72. Machczynski, M. C.; Gray, H. B.; Richards, J. H. J. Inorg. Biochem. 2002, 88, 375-380.
73. Libeu, C. A. P.; Kukimoto, M.; Nishiyama, M.; Horinouchi, S.; Adman, E. T. Biochemistry 1997, 36, 13160-13179.
74. Carrell, C. J.; Sun, D.; Jiang, S.; Davidson V. L.; Mathews, F. S. Biochemistry 2004, 43, 9372-9380.
75. Hoitink, C. W. G.; Canters, G. W. J. Biol. Chem. 1992, 267, 13836-13842.
76. Hall, J. F.; Kanbi, L. D.; Harvey, I.; Murphy, L. M.; Hasnain, S. S. Biochemistry 1998, 37, 11451-11458.
77. Dennison, C.; Harrison, M. D.; Lawler, A. T. Biochem. J. 2003, 371, 377-383.
78. Kohzuma, T.; Dennison, C.; Mcfarlane, W.: Nakashima, S.; Kitagawa, T.; Inoue, T.; Kai, Y.; Nishio, N.; Shidara, S.; Suzuki, S.; Sykes, A. G. J. Biol. Chem. 1995, 270, 25733-25738.
79. Harrison, M. D.; Yanagisawa, S.; Dennison, C. Biochemistry 2005, 44, 3056-3064.
80. Kohzuma, T.; Inoue, T.; Yoshizaki, F.; Sasakawa, Y.; Onodera, K.; Nagatomo, S.; Kitagawa, T.; Uzawa, S.; Isobe, Y.; Sugimura, Y.; Gotowda, M.; Kai, Y. J. Biol. Chem. 1999, 274, 11817-11823.
81. Dennison, C.; Kohzuma, T.; Mcfarlane, W.; Suzuki, S.; Sykes, A. G. J. Chem. Soc., Chem. Commun. 1994, 581-582.
82. Lommen, A.; Canters, G. W.; Vanbeeumen, J. Eur. J. Biochem. 1988, 176, 213-223.
83. Segal, M. G.; Sykes, A. G. J. Am. Chem. Soc. 1978, 100, 4585-4592.
84. Dennison, C.; Lawler, A. T.; Kohzuma, T. Biochemistry 2002, 41, 552-560.
85. Gotschlich, E. C.; Seiff, M. E. FEMS Microbiol. Lett. 1987, 43, 253-255.
86. Mattar, S.; Scharf, B.; Kent, S. B. H.; Rodewald, K.; Oesterhelt, D.; Engelhard, M. J. Biol. Chem. 1994, 269, 14939-14945.
87. Rooney, M. B.; Honeychurch, M. J.; Selvaraj, F. M.; Blankenship, R. E.; Bond, A. M.; Freeman, H. C. J. Biol. Inorg. Chem. 2003, 8, 306-317.
88. Brischwein, M.; Scharf, B.; Engelhard, M.; Mantele, W. Biochemistry 1993, 32, 13710-13717.
89. Schaerlaekens, K.; Van Mellaert, L.; Lammertyn, E.; Geukens, N.; Anne, J. Microbiology-Sgm 2004, 150, 21-31.