Selection for more of the same product as a force to enhance concerted evolution of duplicated genes

Trends in Genetics

Volumn 22, Issue 12, 2006, Pages 642-644

  Sugino, Ryuichi P ^a,b   Innan, Hideki ^a,b  

^a UNIVERSITY OF TEXAS SCHOOL OF PUBLIC HEALTH   (United States)

^b GRADUATE UNIVERSITY FOR ADVANCED STUDIES   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

DNA MICROARRAY; GENE CONVERSION; GENE DOSAGE; GENE DUPLICATION; GENE EXPRESSION; GENE SEQUENCE; GENETIC SELECTION; HOMOZYGOTE; MOLECULAR EVOLUTION; NONHUMAN; PRIORITY JOURNAL; PROTEIN EXPRESSION; RNA HYBRIDIZATION; SACCHAROMYCES CEREVISIAE; SHORT SURVEY; YEAST;

EVOLUTION, MOLECULAR; FUNGAL PROTEINS; GENE DOSAGE; GENE DUPLICATION; GENE EXPRESSION REGULATION, FUNGAL; GENES, FUNGAL; GENOME, FUNGAL; MODELS, GENETIC; PHYLOGENY; RIBOSOMES; SACCHAROMYCES CEREVISIAE; SELECTION (GENETICS); TEMPERATURE; VARIATION (GENETICS);

EID: 33750963793     PISSN: 01689525     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.tig.2006.09.014     Document Type: Short Survey

References (20)

1. Ohta T. Evolution and Variation of Multigene Families (1980), Springer-Verlag
2. Li W.-H. Molecular Evolution (1997), Sinauer
3. Gao L.-z., and Innan H. Very low gene duplication rate in the yeast genome. Science 306 (2004) 1367-1370
4. Sugino R.P., and Innan H. Estimating the time to the whole-genome duplication and the duration of concerted evolution via gene conversion in yeast. Genetics 171 (2005) 63-69
5. Innan H. A method for estimating the mutation, gene conversion and recombination parameters in small multigene families. Genetics 161 (2002) 865-872
6. Teshima K.M., and Innan H. The effect of gene conversion on the divergence between duplicated genes. Genetics 166 (2004) 1553-1560
7. Ohno S. Evolution by Gene Duplication (1970), SpringerVerlag
8. Ohta T. The mutational load of a multigene family with uniform numbers. Genet. Res. 53 (1989) 141-145
9. Hurst L.D., and Smith N.G.C. The evolution of concerted evolution. Proc. R. Soc. Lond. B. Biol. Sci. 265 (1998) 121-127
10. Brown D.D., et al. A comparison of the ribosomal DNA's of Xenopus laevis and Xenopus mulleri: the evolution of tandem genes. J. Mol. Biol. 63 (1972) 57-73
11. Ghaemmaghami S., et al. Global analysis of protein expression in yeast. Nature 425 (2003) 737-741
12. Sharp P.M., and Li W.-H. The codon adaptation index - a measure of directional synonymous codon usage bias, and its potential applications. Nucleic Acids Res. 15 (1987) 1281-1295
13. Papp B., et al. Dosage sensitivity and the evolution of gene families in yeast. Nature 424 (2003) 194-197
14. Kondrashov F.A., and Koonin E.V. A common framework for understanding the origin of genetic dominance and evolutionary fates of gene duplications. Trends Genet. 20 (2004) 287-291
15. Davis J.C., and Petrov D.A. Preferential duplication of conserved proteins in eukaryotic genomes. PLoS Biol. 2 (2004) e55
16. Steinmetz L.M., et al. Systematic screen for human disease genes in yeast. Nat. Genet. 31 (2002) 400-404
17. Innan H. A two-locus gene conversion model with selection and its application to the human RHCE and RHD genes. Proc. Natl. Acad. Sci. U. S. A. 100 (2003) 8793-8798
18. Wolfe K.H., and Shields D.C. Molecular evidence for an ancient duplication of the entire yeast genome. Nature 387 (1997) 708-713
19. Kellis M., et al. Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae. Nature 428 (2004) 617-624
20. Dietrich F., et al. The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces cerevisiae genome. Science 304 (2004) 304-307