Identification of FGF-dependent genes in the Drosophila tracheal system

Gene Expression Patterns

Volumn 7, Issue 1-2, 2007, Pages 202-209

  Stahl, Markus ^a,b   Schuh, Reinhard ^a   Adryan, Boris ^a,c  

^a MAX PLANCK INSTITUTE FOR BIOPHYSICAL CHEMISTRY   (Germany)

^b UNIVERSITY OF GÖTTINGEN   (Germany)

^c MRC LABORATORY OF MOLECULAR BIOLOGY   (United Kingdom)

Author keywords

Anatomical ontology; Branchless; Breathless; Chitin metabolism; Drosophila; FGF; Fibroblast growth factor; Foraging; Gasp; Gene expression; ImaGO; Microarray; Stat92E; Tracheal system

Indexed keywords

BRANCHLESS PROTEIN; FIBROBLAST GROWTH FACTOR; UNCLASSIFIED DRUG;

ANIMAL TISSUE; ARTICLE; CONTROLLED STUDY; DROSOPHILA; EMBRYO DEVELOPMENT; GENE MAPPING; GENE MUTATION; GENE OVEREXPRESSION; GENETIC IDENTIFICATION; HIGH THROUGHPUT SCREENING; IN SITU HYBRIDIZATION; NONHUMAN; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PROTEIN FUNCTION; QUANTITATIVE ANALYSIS; TRACHEA;

AMINO ACID SEQUENCE; ANIMALS; ANIMALS, GENETICALLY MODIFIED; BASE SEQUENCE; DNA PRIMERS; DROSOPHILA MELANOGASTER; DROSOPHILA PROTEINS; FIBROBLAST GROWTH FACTORS; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENES, INSECT; IN SITU HYBRIDIZATION; MOLECULAR SEQUENCE DATA; MUTATION; PHENOTYPE; PROTEIN-TYROSINE KINASES; RECEPTORS, FIBROBLAST GROWTH FACTOR; SEQUENCE HOMOLOGY, AMINO ACID; SIGNAL TRANSDUCTION; TRACHEA;

EID: 33750811633     PISSN: 1567133X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.modgep.2006.07.005     Document Type: Article

References (39)

1. Affolter M., Montagne J., Walldorf U., Groppe J., Kloter U., LaRosa M., and Gehring W.J. The Drosophila SRF homolog is expressed in a subset of tracheal cells and maps within a genomic region required for tracheal development. Development 120 (1994) 743-753
2. Barry M.K., Triplett A.A., and Christensen A.C. A peritrophin-like protein expressed in the embryonic tracheae of Drosophila melanogaster. Insect Biochem. Mol. Biol. 29 (1999) 319-327
3. Behr M., and Hoch M. Identification of the novel evolutionary conserved obstructor multigene family in invertebrates. FEBS Lett. 579 (2005) 6827-6833
4. Bellusci S., Grindley J., Emoto H., Itoh N., and Hogan B.L. Fibroblast growth factor 10 (FGF10) and branching morphogenesis in the embryonic mouse lung. Development 124 (1997) 4867-4878
5. Boutanaev A.M., Kalmykova A.I., Shevelyov Y.Y., and Nurminsky D.I. Large clusters of co-expressed genes in the Drosophila genome. Nature 420 (2002) 666-669
6. Brand A.H., and Perrimon N. Targeted gene expression as a means of altering cell fates and generating dominant phenotypes. Development 118 (1993) 401-415
7. Campos-Ortega J.A., and Hartenstein V. The Emryonic Development of Drosophila melanogaster (1985), Springer
8. Ghabrial A., Luschnig S., Metzstein M.M., and Krasnow M.A. Branching morphogenesis of the Drosophila tracheal system. Annu. Rev. Cell. Dev. Biol. 19 (2003) 623-647
9. Glazer L., and Shilo B.Z. The Drosophila FGF-R homolog is expressed in the embryonic tracheal system and appears to be required for directed tracheal cell extension. Genes Dev. 5 (1991) 697-705
10. Guillemin K., Groppe J., Ducker K., Treisman R., Hafen E., Affolter M., and Krasnow M.A. The pruned gene encodes the Drosophila serum response factor and regulates cytoplasmic outgrowth during terminal branching of the tracheal system. Development 122 (1996) 1353-1362
11. Hacohen N., Kramer S., Sutherland D., Hiromi Y., and Krasnow M.A. Sprouty encodes a novel antagonist of FGF signaling that patterns apical branching of the Drosophila airways. Cell 92 (1998) 253-263
12. Hogan B.L. Morphogenesis. Cell 96 (1999) 225-233
13. Litingtung Y., Lei L., Westphal H., and Chiang C. Sonic hedgehog is essential to foregut development. Nat. Genet. 20 (1998) 58-61
14. Lee T., Hacohen N., Krasnow M., and Montell D.J. Regulated Breathless receptor tyrosine kinase activity required to pattern cell migration and branching in the Drosophila tracheal system. Genes Dev. 10 (1996) 2912-2921
15. Manning G., and Krasnow M.A. Development of the Drosophila tracheal system. In: Bate M., and Martinez Arias A. (Eds). The Development of Drosophila melanogaster (1993), Cold Spring Harbor Laboratory Press, Cold Spring Harbor 609-685
16. Metzger R.J., and Krasnow M.A. Genetic control of branching morphogenesis. Science 284 (1999) 1635-1639
17. Min H., Danilenko D.M., Scully S.A., Bolon B., Ring B.D., Tarpley J.E., DeRose M., and Simonet W.S. Fgf-10 is required for both limb and lung development and exhibits striking functional similarity to Drosophila branchless. Genes Dev. 12 (1998) 3156-3161
18. Montagne J., Groppe J., Guillemin K., Krasnow M.A., Gehring W.J., and Affolter M. The Drosophila serum response factor gene is required for the formation of intervein tissue of the wing and is allelic to blistered. Development 122 (1996) 2589-2597
19. Ornitz, D.M., Itoh, N. (2001). Fibroblast growth factors. Genome Biol 2, REVIEWS3005.
20. Ohshiro T., Emori Y., and Saigo K. Ligand-dependent activation of breathless FGF receptor gene in Drosophila developing trachea. Mech. Dev. 114 (2002) 3-11
21. Ohshiro T., and Saigo K. Transcriptional regulation of breathless FGF receptor gene by binding of Trachealess/dARNT heterodimers to three central midline elements in Drosophila developing trachea. Development 124 (1997) 3975-3986
22. Parkinson H., Sarkans U., Shojatalab M., Abeygunawardena N., Contrino S., Coulson R., Farne A., Lara G.G., Holloway E., Kapushesky M., et al. ArrayExpress-a public repository for microarray gene expression data at the EBI. Nucleic Acids Res. 33 (2005) 553-555
23. Perrimon N., Noll E., McCall K., and Brand A. Generating lineage-specific markers to study Drosophila development. Dev. Genet. 12 (1991) 238-252
24. Peters K.G., Werner S., Chen G., and Williams L.T. Two FGF receptor genes are differentially expressed in epithelial and mesenchymal tissues during limb formation and organogenesis in the mouse. Development 114 (1992) 233-243
25. Peters K., Werner S., Liao X., Wert S., Whitsett J., and Williams L. Targeted expression of a dominant negative FGF receptor blocks branching morphogenesis and epithelial differentiation of the mouse lung. Embo. J. 13 (1994) 3296-3301
26. Reichman-Fried M., Dickson B., Hafen E., and Shilo B.Z. Elucidation of the role of breathless, a Drosophila FGF receptor homolog, in tracheal cell migration. Genes Dev. 8 (1994) 428-439
27. Reichman-Fried M., and Shilo B.Z. Breathless, a Drosophila FGF receptor homolog, is required for the onset of tracheal cell migration and tracheole formation. Mech. Dev. 52 (1995) 265-273
28. Samakovlis C., Hacohen N., Manning G., Sutherland D.C., Guillemin K., and Krasnow M.A. Development of the Drosophila tracheal system occurs by a series of morphologically distinct but genetically coupled branching events. Development 122 (1996) 1395-1407
29. Samakovlis C., Manning G., Steneberg P., Hacohen N., Cantera R., and Krasnow M.A. Genetic control of epithelial tube fusion during Drosophila tracheal development. Development 122 (1996) 3531-3536
30. Sekine K., Ohuchi H., Fujiwara M., Yamasaki M., Yoshizawa T., Sato T., Yagishita N., Matsui D., Koga Y., Itoh N., and Kato S. Fgf10 is essential for limb and lung formation. Nat. Genet. 21 (1999) 138-141
31. Shiga Y., Tanaka-Matakatsu M., and Hayashi S. A nuclear GFP/β-Galactosidase fusion protein as a marker for morphogenesis in living Drosophila. Dev. Growth Diffn. 38 (1996) 99-106
32. Sutherland D., Samakovlis C., and Krasnow M.A. Branchless encodes a Drosophila FGF homolog that controls tracheal cell migration and the pattern of branching. Cell 87 (1996) 1091-1101
33. Tomancak, P., Beaton, A., Weiszmann, R., Kwan, E., Shu, S., Lewis, S.E., Richards, S., Ashburner, M., Hartenstein, V., Celniker, S.E., Rubin, G.M. (2002). Systematic determination of patterns of gene expression during Drosophila embryogenesis. Genome Biol. 3, RESEARCH0088.
34. Uttenweiler-Joseph S., Moniatte M., Lagueux M., Van Dorsselaer A., Hoffmann J.A., and Bulet P. Differential display of peptides induced during the immune response of Drosophila: a matrix-assisted laser desorption ionization time-of-flight mass spectrometry study. Proc. Natl. Acad. Sci. USA 95 (1998) 11342-11347
35. Warburton D., Schwarz M., Tefft D., Flores-Delgado G., Anderson K.D., and Cardoso W.V. The molecular basis of lung morphogenesis. Mech. Dev. 92 (2000) 55-81
36. Wingrove J.A., and O'Farrell P.H. Nitric oxide contributes to behavioral, cellular, and developmental responses to low oxygen in Drosophila. Cell 98 (1999) 105-114
37. Witt O., Monkemeyer S., Ronndahl G., Erdlenbruch B., Reinhardt D., Kanbach K., and Pekrun A. Induction of fetal hemoglobin expression by the histone deacetylase inhibitor apicidin. Blood 101 (2003) 2001-2007
38. Wolf C., and Schuh R. Single mesodermal cells guide outgrowth of ectodermal tubular structures in Drosophila. Genes Dev. 14 (2000) 2140-2145
39. Zhu M.Y., Wilson R., and Leptin M. A screen for genes that influence fibroblast growth factor signal transduction in Drosophila. Genetics 170 (2005) 767-777