Proteomic analysis of cancer tissues: Shedding light on carcinogenesis and possible biomarkers

Proteomics

Volumn 6, Issue 20, 2006, Pages 5650-5661

  Kuramitsu, Yasuhiro ^a   Nakamura, Kazuyuki ^a  

^a YAMAGUCHI UNIVERSITY GRADUATE SCHOOL OF MEDICINE   (Japan)

Author keywords

Colorectal cancer; Esophageal cancer; Hepatocellular carcinoma; Pancreatic cancer

Indexed keywords

BIOLOGICAL MARKER; TUMOR MARKER;

CANCER CELL; CANCER DIAGNOSIS; CANCER PATIENT; CANCER TISSUE; CARCINOGENESIS; COLORECTAL CANCER; DIGESTIVE SYSTEM CANCER; ESOPHAGUS CANCER; HUMAN; LIVER CELL CARCINOMA; LUNG CANCER; PANCREAS CANCER; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEOMICS; REVIEW; STOMACH CANCER; UTERINE CERVIX CANCER;

CARCINOGENS; CARCINOMA, HEPATOCELLULAR; COLORECTAL NEOPLASMS; ESOPHAGEAL NEOPLASMS; FEMALE; GENE EXPRESSION REGULATION, NEOPLASTIC; HUMANS; LIVER NEOPLASMS; MALE; NEOPLASMS; PANCREATIC NEOPLASMS; PROTEOMICS; RECURRENCE; TUMOR MARKERS, BIOLOGICAL;

EID: 33750593818     PISSN: 16159853     EISSN: 16159861     Source Type: Journal    
DOI: 10.1002/pmic.200600218     Document Type: Review

References (91)

1. Vital Statistics of Japan 2003, Statistics and Information Dept., Minister's Secretariat, Ministry of Health, Labor and Welfare of Japan.
2. O'Farrell, P. H., J. Biol. Chem. 1975, 250, 4007-4021.
3. Latner, A. L., Marshall, T., Gambie, M., Clin. Chim. Acta 1980, 103, 51-59.
4. Gorg, A., Weiss, W., Dunn, M. J., Proteomics 2004, 4, 3665-3685.
5. Anderson, N. L., Anderson, N. G., Mol. Cell. Proteomics 2002, 1, 845-867.
6. Unlu, M., Morgan, M. E., Minden, J. S., Electrophoresis 1997, 18, 2071-2077.
7. Tonge, R., Shaw, J., Middleton, B., Rowlinson, R. et al., Proteomics 2001, 1, 377-396.
8. Shaw, J., Rowlinson, R., Nickson, J., Stone, T. et al., Proteomics 2003, 3, 1181-1195.
9. Kondo, T., Seike, M., Mori, Y., Fujii, K. et al., Proteomics 2003, 3, 1758-1766.
10. Wang, D., Jensen, R., Gendeh, G., Williams, K., Pallavicini, M. G., J. Proteome Res. 2004, 3, 627-635.
11. Zhou, G., Li, H., DeCamp, D., Chen, S. et al., Mol. Cell. Proteomics 2002, 1, 117-124.
12. Zang, L., Palmer Toy, D., Hancock, W. S., Sgroi, D. C., Karger, B. L., J. Proteome Res. 2004, 3, 604-612.
13. Li, C., Hong, Y., Tan, Y. X., Zhou, H. et al., Mol. Cell. Proteomics 2004, 3, 399-409.
14. Lin, Z., Crockett, D. K., Jenson, S. D., Lim, M. S., Elenitoba-Johnson, K. S., Mol. Cell. Proteomics 2004, 3, 820-833.
15. Hutchens, T. W., Yip, T. T., Rapid. Commun. Mass Spectrom. 1993, 7, 576-580.
16. Issaq, H. J., Veenstra, T. D., Conrads, T. P., Felschow, D., Biochem. Biophys. Res. Commun. 2002, 292, 587-592.
17. Liu, W., Guan, M., Wu, D., Zhang, Y. et al., Eur. Urol. 2005, 47, 456-462.
18. Woong-Shick, A., Sung-Pil, P., Su-Mi, B., Joon-Mo, L. et al., Cancer Sci. 2005, 96, 197-201.
19. Malik, G., Ward, M. D., Gupta, S. K., Trosset, M. W. et al., Clin. Cancer Res. 2005, 11, 1073-1085.
20. El-Serag, H. B., Mason, A. C., N. Engl. J. Med. 1994, 340, 745-750.
21. Di Bisceglie, A. M., Simpson, L. H., Lotze, M. T., Hoofnagle, J. H., J. Clin. Gastroenterol. 1994, 19, 222-226.
22. Okuda, K., J. Hepatol. 2000, 32, 225-237.
23. Seow, T. K., Liang, R. C., Leow, C. K., Chung, M. C., Proteomics 2001, 1, 1249-1263.
24. Chambers, G., Lawrie, L., Cash, P., Murray, G. I., J. Pathol. 2000, 192, 280-288.
25. Alaiya, A. A., Franzen, B., Auer, G., Linder, S., Electrophoresis 2000, 21, 1210-1217.
26. Xu, L., Hui, L., Wang, S., Gong, J. et al., Cancer Res. 2001, 61, 3176-3181.
27. Hanash, S. M., Electrophoresis 2000, 21, 1202-1209.
28. Park, K. S., Kim, H., Kim, N. G., Cho, S. Y. et al., Hepatology 2002, 35, 1459-1466.
29. Park, K. S., Cho, S. Y., Kim, H., Paik, Y. K., Int. J. Cancer 2002, 97, 261-265.
30. Kim, J., Kim, S. H., Lee, S. U., Ha, G. H. et al., Electrophoresis 2002, 23, 4142-4156.
31. Lim, S. O., Park, S. J., Kim, W., Park, S. G. et al., Biochem. Biophys. Res. Commun. 2002, 291, 1031-1037.
32. Li, C., Tan, Y., Zhou, H., Ding, S. J. et al., Proteomics 2005, 5, 1125-1139.
33. Fujii, K., Kondo, T., Yokoo, H., Yamada, T. et al., Proteomics 2005, 5, 1411-1422.
34. Zeindl-Eberhart, E., Haraida, S., Liebmann, S., Jungblut, P. R. et al., Hepatology 2004, 39, 540-549.
35. Kim, W., Oe Lim, S., Kim, J. S., Ryu, Y. H. et al., Clin. Cancer Res. 2003, 9, 5493-5500.
36. Takashima, M., Kuramitsu, Y., Yokoyama, Y., Iizuka, N. et al., Proteomics 2004, 3, 2487-2493.
37. Yokoyama, Y., Kuramitsu, Y., Takashima, M., Iizuka, N. et al., Proteomics 2004, 4, 2111-2116.
38. Takashima, M., Kuramitsu, Y., Yokoyama, Y., Iizuka, N. et al., Proteomics 2005, 5, 1686-1692.
39. Kuramitsu, Y., Harada, T., Takashima, M., Yokoyama, Y. et al., Electrophoresis 2006, 27, 1651-1658.
40. Paradis, V., Degos, F., Dargere, D., Pham, N. et al., Hepatology 2005, 41, 40-47.
41. Steel, L. F., Shumpert, D., Trotter, M., Seeholzer, S. H. et al., Proteomics 2003, 3, 601-609.
42. Le Naour, F., Brichory, F., Misek, D. E., Brechot, C. et al., Mol. Cell. Proteomics 2002, 3, 197-203.
43. Takashima, T., Kuramitsu, Y., Yokoyama, Y., Iizuka, N. et al., Proteomics 2006, 6, 3894-3900.
44. Shen, J., Person, M. D., Zhu, J., Abbruzzese, J. L., Li, D., Cancer Res. 2004, 64, 9018-9026.
45. Gronborg, M., Bunkenborg, J., Kristiansen, T. Z., Jensen, O. N. et al., J. Proteome Res. 2004, 3, 1042-1055.
46. Hong, S., Misek, D. E., Wang, H., Puravs, E. et al., Cancer Res. 2004, 64, 5504-5510.
47. Oka, M., Yamamoto, K., Takahashi, M., Hakozaki, M. et al., Cancer Res. 1996, 56, 2776-2780.
48. Zhou, G., Li, H., DeCamp, D., Chen, S. et al., Mol. Cell. Proteomics 2002, 1, 117-123.
49. Emmert-Buck, M. R., Gillespie, J. W., Paweletz, C. P., Ornstein, D. K. et al., Mol. Carcinog. 2000, 27, 158-165.
50. Zhang, L., Ying, W., Mao, Y., He, H. et al., World J. Gastroenterol. 2003, 9, 650-654.
51. Zhou, G., Li, H., Gong, Y., Zhao, Y. et al., Proteomics 2005, 5, 3814-3821.
52. Qi, Y., Chiu, J. F., Wang, L., Kwong, D. L., He, Q. Y., Proteomics 2005, 5, 2960-2971.
53. Correa, P., World J. Surg. 1991, 15, 228-234.
54. Terry, M. B., Gaudet, M. M., Gammon, M. D., Semin. Radiat. Oncol. 2002, 12, 111-127.
55. Fuchs, C. S., Mayer, R. J., N. Engl. J. Med. 1995, 333, 32-41.
56. Melle, C., Ernst, G., Schimmel, B., Bleul, A. et al., J. Proteome Res. 2005, 4, 1799-1804.
57. Lee, C., Lum, J. H., Cheung, B. P., Wong, M. et al., Proteomics 2005, 5, 1160-1166.
58. Ryu, J. W., Kim, H. J., Lee, Y. S., Myong, N. H. et al., J. Korean Med. Sci. 2003, 18, 505-509.
59. Nishigaki, R., Osaki, M., Hiratsuka, M., Toda, T. et al., Proteomics 2005, 5, 3205-3213.
60. He, Q. Y., Cheung, Y. H., Leung, S. Y, Yuen, S. T. et al., Proteomics 2004, 4, 3276-3287.
61. Kim, Y. S., Hwang, S. Y., Oh, S., Sohn, H., Proteomics 2004, 4, 3353-3358.
62. Lee, K., Kye, M., Jang, J. S., Lee, O. J. et al., Proteomics 2004, 4, 3343-3352.
63. Bingham, S., Riboli, E., Nat. Rev. Cancer 2004, 4, 206-215.
64. Kinzler, K. W., Vogelstein, B., Cell 1996, 87, 159-170.
65. Fearon, E. R., Vogelstein, B., Cell 1990, 61, 759-767.
66. Skandarajah, A. R., Moritz, R. L., Tjandra, J. J., Simpson, R. J., Expert Rev. Proteomics 2005, 2, 681-692.
67. Dundas, S. R., Lawrie, L. C., Rooney, P. H., Murray, G. I., J. Pathol. 2005, 205, 74-81.
68. Lane, C. S., Nisar, S., Griffiths, W. J., Fuller, B. J. et al., Eur. J. Cancer 2004, 40, 2127-2134.
69. Stulik, J., Koupilova, K., Osterreicher, J., Knizek, J. et al., Electrophoresis 1999, 20, 3638-3646.
70. Alfonso, P., Nunez, A., Madoz-Gurpide, J., Lombardia, L. et al., Proteomics 2005, 5, 2602-2611.
71. Friedman, D. B., Hill, S., Keller, J. W., Merchant, N. B. et al., Proteomics 2004, 4, 793-811.
72. Minowa, T., Ohtsuka, S., Sasai, H., Kamada, M., Electrophoresis 2000, 21, 1782-1786.
73. Simpson, R. J., Connolly, L. M., Eddes, J. S., Pereira, J. J. et al., Electrophoresis 2000, 21, 1707-1732.
74. Spira, A., Ettinger, D. S., N. Engl. J. Med. 2004, 350, 379-392.
75. Li, C., Xiao, Z., Chen, Z., Zhang, X. et al., Proteomics 2006, 6, 547-558.
76. Wu, X., Xiao, Z., Chen, Z., Li, C. et al., Pathol. Int. 2004, 54, 765-773.
77. Li, L., Kim, H., Rhee, H., Kim, S. H. et al., Proteomics 2004, 4, 3394-3400.
78. Alfonso, P., Catala, M., Rico-Morales, M. L., Durante-Rodriguez, G. et al., Proteomics 2004, 4, 442-447.
79. Chen, G., Gharib, T. G., Thomas, D. G., Huang, C. C. et al., Proteomics 2003, 3, 496-504.
80. Chen, G., Gharib, T. G., Huang, C. C., Thomas, D. G. et al., Clin. Cancer Res. 2002, 8, 2298-2305.
81. Seike, M., Kondo, T., Fujii, K., Okano, T. et al., Proteomics 2005, 5, 2939-2948.
82. Liu, Y., Chen, Q., Zhang, J. T., J. Proteome Res. 2004, 3, 728-735.
83. Tyan, Y. C., Wu, H. Y., Su, W. C., Chen, P. W., Liao, P. C., Proteomics 2005, 5, 1062-1074.
84. Chung, T. K., Cheung, T. H., Lo, W. K., Yu, M. Y. et al., Cancer Lett. 2000, 154, 189-194.
85. Nguyen, G. K., Nguyen-Ho, P., Husain, M., Husain, E. M., Anat. Pathol. 1996, 1, 139-164.
86. Wong, Y. F., Cheung, T. H., Lo, K. W., Wang, V. W. et al., Cancer Lett. 2004, 211, 227-234.
87. Lee, K. H., Yim, E. K., Kim, C. J., Namkoong, S. E. et al., Gynecol. Oncol. 2005, 98, 45-53.
88. Castagna, A., Antonioli, P., Astner, H., Hamdan, M. et al., Proteomics 2004, 4, 3246-3267.
89. Nawata, S., Murakami, A., Hirabayashi, K., Sakaguchi, Y. et al., Electrophoresis 1999, 20, 614-617.
90. Nawata, S., Nakamura, K., Hirakawa, H., Sueoka, K. et al., Electrophoresis 2003, 24, 2277-2282.
91. Wang, Y., Hanley, R., Klemke, R. L., J. Proteome Res. 2006, 5, 907-915.