Glass transition in biomolecules and the liquid-liquid critical point of water

Physical Review Letters

Volumn 97, Issue 17, 2006, Pages

  Kumar, Pradeep ^a   Yan, Z ^a   Xu, L ^a   Mazza, M G ^a   Buldyrev, S V ^a,b   Chen, S H ^c   Sastry, S ^d   Stanley, H E ^a  

^a USA   (United States)

^b YESHIVA UNIVERSITY   (United States)

^c Massachusetts Institute of Technology   (United States)

^d JAWAHARLAL NEHRU CENTRE FOR ADVANCED SCIENTIFIC RESEARCH   (India)

Author keywords

[No Author keywords available]

Indexed keywords

ENZYMES; GLASS TRANSITION; HYDRATION; MACROMOLECULES; THERMODYNAMICS; WATER;

DIFFUSIVITY; HYDRATION WATER; ORIENTATIONAL ORDER PARAMETERS; PROTEIN GLASS TRANSITION;

MOLECULAR DYNAMICS;

DNA; GLASS; LYSOZYME; WATER;

ARTICLE; CHEMICAL MODEL; CHEMISTRY; COMPUTER SIMULATION; TEMPERATURE; THERMODYNAMICS;

COMPUTER SIMULATION; DNA; GLASS; MODELS, CHEMICAL; MURAMIDASE; TEMPERATURE; THERMODYNAMICS; WATER;

EID: 33750430306     PISSN: 00319007     EISSN: 10797114     Source Type: Journal    
DOI: 10.1103/PhysRevLett.97.177802     Document Type: Article

References (46)

1. D. Ringe and G.A. Petsko, Biophys. Chem. 105, 667 (2003). BICIAZ 0301-4622 10.1016/S0301-4622(03)00096-6
2. H. Hartmann, Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 79, 4967 (1982). 10.1073/pnas.79.16.4967
3. A.L. Lee and A.J. Wand, Nature (London) 411, 501 (2001). NATUAS 0028-0836 10.1038/35078119
4. B.F. Rasmussen, Nature (London) 357, 423 (1992). NATUAS 0028-0836 10.1038/357423a0
5. W. Doster, Nature (London) 337, 754 (1989). NATUAS 0028-0836 10.1038/337754a0
6. D. Vitkup, Nat. Struct. Biol. 7, 34 (2000). NSBIEW 1072-8368 10.1038/71231
7. M. Tarek and D.J. Tobias, Phys. Rev. Lett. 88, 138101 (2002); PRLTAO 0031-9007 10.1103/PhysRevLett.88.138101
8. M. Tarek D.J. Tobias Biophys. J. 79, 3244 (2000). BIOJAU 0006-3495
9. J.M. Zanotti, Biophys. J. 76, 2390 (1999). BIOJAU 0006-3495
10. A.P. Sokolov, J. Chem. Phys. 110, 7053 (1999). JCPSA6 0021-9606 10.1063/1.478610
11. J. Norberg and L. Nilsson, Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 93, 10173 (1996). 10.1073/pnas.93.19.10173
12. A.L. Tournier, Biophys. J. 85, 1871 (2003). BIOJAU 0006-3495
13. P.H. Poole, Nature (London) 360, 324 (1992). NATUAS 0028-0836 10.1038/360324a0
14. I. Brovchenko, J. Chem. Phys. 118, 9473 (2003). JCPSA6 0021-9606 10.1063/1.1576372
15. I. Brovchenko, J. Chem. Phys. 123, 044515 (2005). JCPSA6 0021-9606 10.1063/1.1992481
16. L. Xu, Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 102, 16558 (2005). 10.1073/pnas.0507870102
17. P.H. Poole, J. Phys. Condens. Matter 17, L431 (2005). JCOMEL 0953-8984 10.1088/0953-8984/17/43/L01
18. M.A. Anisimov, in Aqueous System at Elevated Temperatures and Pressures: Physical Chemistry in Water, Steam and Hydrothermal Solutions, edited by, D.A. Palmer, (Elsevier, Amsterdam, 2004), pp. 29-71.
19. K. Morishige and K. Kawano, J. Chem. Phys. 110, 4867 (1999). JCPSA6 0021-9606 10.1063/1.478372
20. L. Liu, Phys. Rev. Lett. 95, 117802 (2005). PRLTAO 0031-9007 10.1103/PhysRevLett.95.117802
21. S.-H. Chen, Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 103, 9012 (2006). 10.1073/pnas.0602474103
22. E. Lindahl, J. Mol. Model. JMMOFK 0948-5023 7, 306 (2001).
23. P.J. Artymiuk, Acta Crystallogr. B ACBCAR 0567-7408 38, 778 (1982). 10.1107/S0567740882004075
24. H.R. Drew, Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 78, 2179 (1981). 10.1073/pnas.78.4.2179
25. J. Wang, J. Comput. Chem. JCCHDD 0192-8651 21, 1049 (2000); 10.1002/1096-987X(200009)21:12<1049::AID-JCC3>3.0.CO;2-F
26. E.J. Sorin and V.S. Pande, Biophys. J. 88, 2472 (2005). BIOJAU 0006-3495 10.1529/biophysj.104.051938
27. M.W. Mahoney and W.L. Jorgensen, J. Chem. Phys. 112, 8910 (2000). JCPSA6 0021-9606 10.1063/1.481505
28. The TIP5P model was shown to accurately reproduce the thermodynamic properties of water at ambient conditions. The properties of TIP5P in the supercooled region were studied in M. Yamada, Phys. Rev. Lett. 88, 195701 (2002); PRLTAO 0031-9007 10.1103/PhysRevLett.88.195701
29. and D. Paschek, Phys. Rev. Lett. 94, 217802 (2005), where it was shown that TIP5P reproduces the dynamic and thermodynamic anomalies of water. PRLTAO 0031-9007 10.1103/PhysRevLett.94.217802
30. J. Horbach and W. Kob, Phys. Rev. B PRBMDO 0163-1829 60, 3169 (1999). 10.1103/PhysRevB.60.3169
31. S.S. Ashwin and S. Sastry, J. Phys. Condens. Matter JCOMEL 0953-8984 15, S1253 (2003). 10.1088/0953-8984/15/11/343
32. F.W. Starr, Physica (Amsterdam) PHYADX 0378-4371 323A, 51 (2003). 10.1016/S0378-4371(03)00012-8
33. W. Götze, J. Phys. Condens. Matter JCOMEL 0953-8984 11, A1 (1999). 10.1088/0953-8984/11/10A/002
34. J.R. Errington and P.G. Debenedetti, Nature (London) 409, 318 (2001). NATUAS 0028-0836 10.1038/35053024
35. S.-H. Chen, J. Chem. Phys. JCPSA6 0021-9606 (to be published).
36. T. Morishita, Phys. Rev. Lett. (to be published). PRLTAO 0031-9007
37. A.L. Lee and A.J. Wand, Nature (London) NATUAS 0028-0836 411, 501 (2001). 10.1038/35078119
38. D. Vitkup, Nat. Struct. Biol. NSBIEW 1072-8368 7, 34 (2000). 10.1038/71231
39. W. Doster and M. Settles, in Hydration Processes in Biology, edited by, M.C. Bellissent-Funel, (IOS Press, Amsterdam, 1999), pp. 177-191.
40. G. Caliskan, J. Am. Chem. Soc. JACSAT 0002-7863 128, 32 (2006). 10.1021/ja056444i
41. J.E. Curtis, J. Am. Chem. Soc. JACSAT 0002-7863 126, 15928 (2004). 10.1021/ja0480623
42. V. Réat, Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 97, 9961 (2000). 10.1073/pnas.97.18.9961
43. M. Teeter, Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 98, 11242 (2001). 10.1073/pnas.201404398
44. M. Weik, Protein Science PRCIEI 0961-8368 10, 1953 (2001). 10.1110/ps.09801
45. P.W. Fenimore, Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 101, 14408 (2004). 10.1073/pnas.0405573101
46. P.W. Fenimore, Physica (Amsterdam) PHYADX 0378-4371 351A, 1 (2005). 10.1016/j.physa.2004.12.004