메뉴 건너뛰기




Volumn 138, Issue 1-2, 2006, Pages 170-176

Quantitation of site-specific HPV 16 DNA methylation by pyrosequencing

Author keywords

CaSki; DNA methylation; Exfoliated cervical cells; HPV; Pyrosequencing; SiHa

Indexed keywords

CYTOSINE; GUANINE; METHANOL; VIRUS DNA;

EID: 33750335085     PISSN: 01660934     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jviromet.2006.08.012     Document Type: Article
Times cited : (27)

References (24)
  • 1
    • 28644434277 scopus 로고    scopus 로고
    • Pyrosequencing: history, biochemistry and future
    • Ahmadian A., Ehn M., and Hober S. Pyrosequencing: history, biochemistry and future. Clin. Chim. Acta 363 (2006) 83-94
    • (2006) Clin. Chim. Acta , vol.363 , pp. 83-94
    • Ahmadian, A.1    Ehn, M.2    Hober, S.3
  • 3
    • 0038365277 scopus 로고    scopus 로고
    • CpG methylation of human papillomavirus type 16 DNA in cervical cancer cell lines and in clinical specimens: genomic hypomethylation correlates with carcinogenic progression
    • Badal V., Chuang L.S., Tan E.H., Badal S., Villa L.L., Wheeler C.M., Li B.F., and Bernard H.U. CpG methylation of human papillomavirus type 16 DNA in cervical cancer cell lines and in clinical specimens: genomic hypomethylation correlates with carcinogenic progression. J. Virol. 77 (2003) 6227-6234
    • (2003) J. Virol. , vol.77 , pp. 6227-6234
    • Badal, V.1    Chuang, L.S.2    Tan, E.H.3    Badal, S.4    Villa, L.L.5    Wheeler, C.M.6    Li, B.F.7    Bernard, H.U.8
  • 4
    • 0021760786 scopus 로고
    • Uneven distribution of methylation sites within the human papillomavirus la genome: possible relevance to viral gene expression
    • Burnett T.S., and Sleeman J.P. Uneven distribution of methylation sites within the human papillomavirus la genome: possible relevance to viral gene expression. Nucl. Acids Res. 12 (1984) 8847-8860
    • (1984) Nucl. Acids Res. , vol.12 , pp. 8847-8860
    • Burnett, T.S.1    Sleeman, J.P.2
  • 6
    • 0038678777 scopus 로고    scopus 로고
    • Sensitive and quantitative universal pyrosequencing methylation analysis of CpG sites
    • Colella S., Shen L., Baggerly K.A., Issa J.P., and Krahe R. Sensitive and quantitative universal pyrosequencing methylation analysis of CpG sites. Biotechniques 35 (2003) 146-150
    • (2003) Biotechniques , vol.35 , pp. 146-150
    • Colella, S.1    Shen, L.2    Baggerly, K.A.3    Issa, J.P.4    Krahe, R.5
  • 7
    • 4444346815 scopus 로고    scopus 로고
    • De novo quantitative bisulfite sequencing using the pyrosequencing technology
    • Dupont J.M., Tost J., Jammes H., and Gut I.G. De novo quantitative bisulfite sequencing using the pyrosequencing technology. Anal. Biochem. 333 (2004) 119-127
    • (2004) Anal. Biochem. , vol.333 , pp. 119-127
    • Dupont, J.M.1    Tost, J.2    Jammes, H.3    Gut, I.G.4
  • 9
    • 0031683626 scopus 로고    scopus 로고
    • Genotyping of 27 human papillomavirus types by using L1 consensus PCR products by a single-hybridization, reverse line blot detection method
    • Gravitt P.E., Peyton C.L., Apple R.J., and Wheeler C.M. Genotyping of 27 human papillomavirus types by using L1 consensus PCR products by a single-hybridization, reverse line blot detection method. J. Clin. Microbiol. 36 (1998) 3020-3027
    • (1998) J. Clin. Microbiol. , vol.36 , pp. 3020-3027
    • Gravitt, P.E.1    Peyton, C.L.2    Apple, R.J.3    Wheeler, C.M.4
  • 10
    • 2442643013 scopus 로고    scopus 로고
    • Molecular quality of exfoliated cervical cells: implications for molecular epidemiology and biomarker discovery
    • Habis A.H., Vernon S.D., Lee D.R., Verma M., and Unger E.R. Molecular quality of exfoliated cervical cells: implications for molecular epidemiology and biomarker discovery. Cancer Epidemiol. Biomarkers Prev. 13 (2004) 492-496
    • (2004) Cancer Epidemiol. Biomarkers Prev. , vol.13 , pp. 492-496
    • Habis, A.H.1    Vernon, S.D.2    Lee, D.R.3    Verma, M.4    Unger, E.R.5
  • 13
    • 0242661842 scopus 로고    scopus 로고
    • Methylation patterns of papillomavirus DNA, its influence on E2 function, and implications in viral infection
    • Kim K., Garner-Hamrick P.A., Fisher C., Lee D., and Lambert P.F. Methylation patterns of papillomavirus DNA, its influence on E2 function, and implications in viral infection. J. Virol. 77 (2003) 12450-12459
    • (2003) J. Virol. , vol.77 , pp. 12450-12459
    • Kim, K.1    Garner-Hamrick, P.A.2    Fisher, C.3    Lee, D.4    Lambert, P.F.5
  • 14
    • 0034035075 scopus 로고    scopus 로고
    • Enhancer-promoter activity of human papillomavirus type 16 long control regions isolated from cell lines SiHa and CaSki and cervical cancer biopsies
    • Kozuka T., Aoki Y., Nakagawa K., Ohtomo K., Yoshikawa H., Matsumoto K., Yoshiike K., and Kanda T. Enhancer-promoter activity of human papillomavirus type 16 long control regions isolated from cell lines SiHa and CaSki and cervical cancer biopsies. Jpn. J. Cancer Res. 91 (2000) 271-279
    • (2000) Jpn. J. Cancer Res. , vol.91 , pp. 271-279
    • Kozuka, T.1    Aoki, Y.2    Nakagawa, K.3    Ohtomo, K.4    Yoshikawa, H.5    Matsumoto, K.6    Yoshiike, K.7    Kanda, T.8
  • 18
    • 0027243333 scopus 로고
    • The effect of DNA methylation on gene regulation of human papillomaviruses
    • Rosl F., Arab A., Klevenz B., and Zur H.H. The effect of DNA methylation on gene regulation of human papillomaviruses. J. Gen. Virol. 74 (1993) 791-801
    • (1993) J. Gen. Virol. , vol.74 , pp. 791-801
    • Rosl, F.1    Arab, A.2    Klevenz, B.3    Zur, H.H.4
  • 19
    • 0043176279 scopus 로고    scopus 로고
    • Human papillomavirus biology and cervical neoplasia: implications for diagnostic criteria and testing
    • Stoler M.H. Human papillomavirus biology and cervical neoplasia: implications for diagnostic criteria and testing. Arch. Pathol. Lab. Med. 127 (2003) 935-939
    • (2003) Arch. Pathol. Lab. Med. , vol.127 , pp. 935-939
    • Stoler, M.H.1
  • 21
    • 0029815037 scopus 로고    scopus 로고
    • CpG methylation directly inhibits binding of the human papillomavirus type 16 E2 protein to specific DNA sequences
    • Thain A., Jenkins O., Clarke A.R., and Gaston K. CpG methylation directly inhibits binding of the human papillomavirus type 16 E2 protein to specific DNA sequences. J. Virol. 70 (1996) 7233-7235
    • (1996) J. Virol. , vol.70 , pp. 7233-7235
    • Thain, A.1    Jenkins, O.2    Clarke, A.R.3    Gaston, K.4
  • 22
    • 0038002236 scopus 로고    scopus 로고
    • Analysis and quantification of multiple methylation variable positions in CpG islands by Pyrosequencing
    • Tost J., Dunker J., and Gut I.G. Analysis and quantification of multiple methylation variable positions in CpG islands by Pyrosequencing. Biotechniques 35 (2003) 152-156
    • (2003) Biotechniques , vol.35 , pp. 152-156
    • Tost, J.1    Dunker, J.2    Gut, I.G.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.