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Volumn 4175 LNBI, Issue , 2006, Pages 1-11

Measures of codon bias in yeast, the tRNA pairing index and possible DNA repair mechanisms

Author keywords

[No Author keywords available]

Indexed keywords

COMPUTATION THEORY; DNA; PROTEINS; RNA; YEAST;

EID: 33750258647     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/11851561_1     Document Type: Conference Paper
Times cited : (8)

References (13)
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    • Elf, J., Nilsson, D., Tenson, T., Ehrenberg, M.: Selective charging of tRNA isoacceptors explains patterns of codon usage. Science 300 (2003) 1718-1722
    • (2003) Science , vol.300 , pp. 1718-1722
    • Elf, J.1    Nilsson, D.2    Tenson, T.3    Ehrenberg, M.4
  • 2
    • 14644396660 scopus 로고    scopus 로고
    • Selective charging of tRNA isoacceptors induced by amino-acid starvation
    • Dittmar, K.A., Sorensen, M.A., Elf, J., Ehrenberg, M., Pan, T.: Selective charging of tRNA isoacceptors induced by amino-acid starvation. EMBO Rep. 6 (2005) 151-157
    • (2005) EMBO Rep. , vol.6 , pp. 151-157
    • Dittmar, K.A.1    Sorensen, M.A.2    Elf, J.3    Ehrenberg, M.4    Pan, T.5
  • 4
    • 0020024572 scopus 로고
    • Codon selection in yeast
    • Bennetzen, J.L., Hall, B.D.: Codon selection in yeast. J. Biol. Chem. 257 (1982) 3026-3031
    • (1982) J. Biol. Chem. , vol.257 , pp. 3026-3031
    • Bennetzen, J.L.1    Hall, B.D.2
  • 5
    • 0023650543 scopus 로고
    • The codon adaptation index-a measure of directional synonymous codon usage bias, and its potential applications
    • Sharp, P.M., Li, W.H.: The codon adaptation index-a measure of directional synonymous codon usage bias, and its potential applications. Nucleic Acids Res. 15 (1987) 1281-1295
    • (1987) Nucleic Acids Res. , vol.15 , pp. 1281-1295
    • Sharp, P.M.1    Li, W.H.2
  • 6
    • 0025318864 scopus 로고
    • The 'effective number of codons' used in a gene
    • Wright, F: The 'effective number of codons' used in a gene. Gene 87 (1990) 23-29
    • (1990) Gene , vol.87 , pp. 23-29
    • Wright, F.1
  • 7
    • 0038620436 scopus 로고    scopus 로고
    • Codon pairs in the genome of Escherichia coli
    • Boycheva, S., Chkodrov, G., Ivanov, I.: Codon pairs in the genome of Escherichia coli. Bioinformatics 19 (2003) 987-998
    • (2003) Bioinformatics , vol.19 , pp. 987-998
    • Boycheva, S.1    Chkodrov, G.2    Ivanov, I.3
  • 8
    • 0242391986 scopus 로고    scopus 로고
    • Codon adaptation index as a measure of dominating codon bias
    • Carbone, A., Zinovyev, A., Kepes, F.: Codon adaptation index as a measure of dominating codon bias. Bioinformatics 19 (2003) 2005-2015
    • (2003) Bioinformatics , vol.19 , pp. 2005-2015
    • Carbone, A.1    Zinovyev, A.2    Kepes, F.3
  • 9
    • 0141920354 scopus 로고    scopus 로고
    • Comparing protein abundance and mRNA expression levels on a genomic scale
    • Greenbaum, D., Colangelo, C., Williams, K., Gerstein, M.: Comparing protein abundance and mRNA expression levels on a genomic scale. Genome Biol. 4 (2003) 117
    • (2003) Genome Biol. , vol.4 , pp. 117
    • Greenbaum, D.1    Colangelo, C.2    Williams, K.3    Gerstein, M.4
  • 10
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    • Limitations of codon adaptation index and other coding DNA-based features for prediction of protein expression in saccharomyces cerevisiae
    • Friberg, M., von Rohr, P., Gonnet, G.: Limitations of codon adaptation index and other coding DNA-based features for prediction of protein expression in saccharomyces cerevisiae. Yeast 21 (2004) 1083-1093
    • (2004) Yeast , vol.21 , pp. 1083-1093
    • Friberg, M.1    Von Rohr, P.2    Gonnet, G.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.