Crystal structure of 2-phosphosulfolactate phosphatase (ComB) from clostridium acetobutylicum at 2.6 Å resolution reveals a new fold with a novel active site
(46)
DiDonato, Michael
a,d
Sri Krishna, S
a,b,c
Schwarzenbacher, Robert
a,c
McMullan, Daniel
a,d
Agarwalla, Sanjay
a,d
Brittain, Scott M
d
Miller, Mitchell D
a,e
Abdubek, Polat
a,d
Ambing, Eileen
a,d
Axelrod, Herbert L
a,e
Canaves, Jaume M
a,c
Chiu, Hsiu Ju
a,e
Deacon, Ashley M
a,e
Duan, Lian
a,c
Elsliger, Marc André
a
Godzik, Adam
a,b,c
Grzechnik, Slawomir K
a,c
Hale, Joanna
a,d
Hampton, Eric
a,d
Haugen, Justin
a,d
Jaroszewski, Lukasz
a,b,c
Jin, Kevin K
a,e
Klock, Heath E
a,d
Knuth, Mark W
a,d
Koesema, Eric
a,d
Kreusch, Andreas
a,d
Kuhn, Peter
a
Lesley, Scott A
a,d
Levin, Inna
a,e
Morse, Andrew T
a,c
Nigoghossian, Edward
a,d
Okach, Linda
a,d
Oommachen, Silvya
a,e
Paulsen, Jessica
a,d
Quijano, Kevin
a,d
Reyes, Ron
a,e
Rife, Christopher L
a,e
Spraggon, Glen
a,d
Stevens, Raymond C
a
Van Den Bedem, Henry
a,e
White, Aprilfawn
a,d
Wolf, Guenter
a,e
Xu, Qingping
a,e
Hodgson, Keith O
a,e
Wooley, John
a,c
Wilson, Ian A
a,e
more..
|
-
1
-
-
0034797059
-
Identification of coenzyme M biosynthetic 2-phosphosulfolactate phosphatase. A member of a new class of Mg(2+)-dependent acid phosphatases
-
Graham DE, Graupner M, Xu H, White RH. Identification of coenzyme M biosynthetic 2-phosphosulfolactate phosphatase. A member of a new class of Mg(2+)-dependent acid phosphatases. Eur J Biochem 2001;268:5176-5188.
-
(2001)
Eur J Biochem
, vol.268
, pp. 5176-5188
-
-
Graham, D.E.1
Graupner, M.2
Xu, H.3
White, R.H.4
-
3
-
-
0242664615
-
The structural determination of phosphosulfolactate synthase from Methanococcus jannaschii at 1.7-Å resolution: An enolase that is not an enolase
-
Wise EL, Graham DE, White RH, Rayment I. The structural determination of phosphosulfolactate synthase from Methanococcus jannaschii at 1.7-Å resolution: an enolase that is not an enolase. J Biol Chem 2003;278:45858-45863.
-
(2003)
J Biol Chem
, vol.278
, pp. 45858-45863
-
-
Wise, E.L.1
Graham, D.E.2
White, R.H.3
Rayment, I.4
-
4
-
-
0037015054
-
Structural genomics of the Thermotoga maritima proteome implemented in a high-throughput structure determination pipeline
-
Lesley SA, Kuhn P, Godzik A, et al. Structural genomics of the Thermotoga maritima proteome implemented in a high-throughput structure determination pipeline. Proc Natl Acad Sci USA 2002;99:11664-11669.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 11664-11669
-
-
Lesley, S.A.1
Kuhn, P.2
Godzik, A.3
-
5
-
-
0014432781
-
Solvent content of protein crystals
-
Matthews BW. Solvent content of protein crystals. J Mol Biol 1968;33:491-497.
-
(1968)
J Mol Biol
, vol.33
, pp. 491-497
-
-
Matthews, B.W.1
-
6
-
-
3242886389
-
MOLPROBITY: Structure validation and all-atom contact analysis for nucleic acids and their complexes
-
Davis IW, Murray LW, Richardson JS, Richardson DC. MOLPROBITY: structure validation and all-atom contact analysis for nucleic acids and their complexes. Nucleic Acids Res 2004;32: W615-619.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Davis, I.W.1
Murray, L.W.2
Richardson, J.S.3
Richardson, D.C.4
-
7
-
-
0028961335
-
SCOP: A structural classification of proteins database for the investigation of sequences and structures
-
Murzin AG, Brenner SE, Hubbard T, Chothia C. SCOP: a structural classification of proteins database for the investigation of sequences and structures. J Mol Biol 1995;247:536-540.
-
(1995)
J Mol Biol
, vol.247
, pp. 536-540
-
-
Murzin, A.G.1
Brenner, S.E.2
Hubbard, T.3
Chothia, C.4
-
8
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 1997;25:3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
-
9
-
-
0028871926
-
Dali: A network tool for protein structure comparison
-
Holm L, Sander C. Dali: a network tool for protein structure comparison. Trends Biochem Sci 1995;20:478-480.
-
(1995)
Trends Biochem Sci
, vol.20
, pp. 478-480
-
-
Holm, L.1
Sander, C.2
-
10
-
-
1842431386
-
Protein tyrosine phosphatases: Strategies for distinguishing proteins in a family containing multiple drug targets and anti-targets
-
Huffman BT, Nelson MR, Burdick K, Baxter SM. Protein tyrosine phosphatases: strategies for distinguishing proteins in a family containing multiple drug targets and anti-targets. Curr Pharm Des 2004;10:1161-1181.
-
(2004)
Curr Pharm Des
, vol.10
, pp. 1161-1181
-
-
Huffman, B.T.1
Nelson, M.R.2
Burdick, K.3
Baxter, S.M.4
-
11
-
-
18344375268
-
An approach to rapid protein crystallization using nanodroplets
-
Santarsiero BD, Yegian DT, Lee CC, et al. An approach to rapid protein crystallization using nanodroplets. J Appl Crystallogr 2002;35:278-281.
-
(2002)
J Appl Crystallogr
, vol.35
, pp. 278-281
-
-
Santarsiero, B.D.1
Yegian, D.T.2
Lee, C.C.3
-
12
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski Z, Minor W. Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol 1997;276:307-326.
-
(1997)
Methods Enzymol
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
13
-
-
0028103275
-
The CCP4 suite: Programs for protein crystallography
-
Collaborative Computational Project, Number 4
-
Collaborative Computational Project, Number 4. The CCP4 suite: programs for protein crystallography. Acta Crystallogr D Biol Crystallogr 1994;50:760-763.
-
(1994)
Acta Crystallogr D Biol Crystallogr
, vol.50
, pp. 760-763
-
-
-
17
-
-
84889120137
-
Improved methods for building protein models in electron density maps and the location of errors in these models
-
Jones TA, Zou JY, Cowan SW, Kjeldgaard. Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Crystallogr A 1991;47:110-119.
-
(1991)
Acta Crystallogr A
, vol.47
, pp. 110-119
-
-
Jones, T.A.1
Zou, J.Y.2
Cowan, S.W.3
Kjeldgaard4
-
18
-
-
0013461295
-
Macromolecular TLS refinement in REFMAC at moderate resolutions
-
Winn MD, Murshudov GN, Papiz MZ. Macromolecular TLS refinement in REFMAC at moderate resolutions. Methods Enzymol 2003;374:300-321.
-
(2003)
Methods Enzymol
, vol.374
, pp. 300-321
-
-
Winn, M.D.1
Murshudov, G.N.2
Papiz, M.Z.3
-
19
-
-
16644393507
-
Automated and accurate deposition of structures solved by X-ray diffraction to the Protein Data Bank
-
Yang H, Guranovic V, Dutta S, Feng Z, Berman HM, Westbrook JD. Automated and accurate deposition of structures solved by X-ray diffraction to the Protein Data Bank. Acta Crystallogr D Biol Crystallogr 2004;60:1833-1839.
-
(2004)
Acta Crystallogr D Biol Crystallogr
, vol.60
, pp. 1833-1839
-
-
Yang, H.1
Guranovic, V.2
Dutta, S.3
Feng, Z.4
Berman, H.M.5
Westbrook, J.D.6
-
20
-
-
0032922193
-
SFCHECK: A unified set of procedures for evaluating the quality of macromolecular structure-factor data and their agreement with the atomic model
-
Vaguine AA, Richelle J, Wodak SJ. SFCHECK: a unified set of procedures for evaluating the quality of macromolecular structure-factor data and their agreement with the atomic model. Acta Crystallogr D Biol Crystallogr 1999;55:191-205.
-
(1999)
Acta Crystallogr D Biol Crystallogr
, vol.55
, pp. 191-205
-
-
Vaguine, A.A.1
Richelle, J.2
Wodak, S.J.3
-
21
-
-
0025398721
-
WHAT IF: A molecular modeling and drug design program
-
29
-
Vriend G. WHAT IF: a molecular modeling and drug design program. J Mol Graph 1990;8:52-56, 29.
-
(1990)
J Mol Graph
, vol.8
, pp. 52-56
-
-
Vriend, G.1
-
22
-
-
0032169688
-
PQS: A protein quaternary structure file server
-
Henrick K, Thornton JM. PQS: a protein quaternary structure file server. Trends Biochem Sci 1998;23:358-361.
-
(1998)
Trends Biochem Sci
, vol.23
, pp. 358-361
-
-
Henrick, K.1
Thornton, J.M.2
-
23
-
-
0032031476
-
Error estimates of protein structure coordinates and deviations from standard geometry by full-matrix refinement of gammaB- and betaB2-crystallin
-
Tickle IJ, Laskowski RA, Moss DS. Error estimates of protein structure coordinates and deviations from standard geometry by full-matrix refinement of gammaB- and betaB2-crystallin. Acta Crystallogr D Biol Crystallogr 1998;54:243-252.
-
(1998)
Acta Crystallogr D Biol Crystallogr
, vol.54
, pp. 243-252
-
-
Tickle, I.J.1
Laskowski, R.A.2
Moss, D.S.3
|