External noise and feedback regulation: Steady-state statistics of auto-regulatory genetic network

Journal of Theoretical Biology

Volumn 243, Issue 2, 2006, Pages 214-221

  Xu, Bing Liang ^a   Tao, Yi ^b  

^a GANSU AGRICULTURAL UNIVERSITY   (China)

^b INSTITUTE OF ZOOLOGY   (China)

Author keywords

Auto regulatory genetic network; External Noise; Feedback regulation; Gene expression

Indexed keywords

MESSENGER RNA; PROTEIN;

FEEDBACK MECHANISM; PROTEIN; RNA; WHITE NOISE;

ARTICLE; AUTOREGULATION; FEEDBACK SYSTEM; GENE EXPRESSION; GENETIC ANALYSIS; LINEAR SYSTEM; NOISE; PRIORITY JOURNAL; SIMULATION; STEADY STATE;

ANIMALS; FEEDBACK, BIOCHEMICAL; FEEDBACK, PHYSIOLOGICAL; GENE EXPRESSION REGULATION; MODELS, GENETIC; NORMAL DISTRIBUTION; PROTEIN BIOSYNTHESIS; RNA, MESSENGER;

EID: 33749666646     PISSN: 00225193     EISSN: 10958541     Source Type: Journal    
DOI: 10.1016/j.jtbi.2006.06.003     Document Type: Article

References (30)

1. Arias A.M., and Hayward P. Nature Rev. Genetics 7 (2005) 34-44
2. Arkin A., Ross J., and McAdams H.H. Genetics 149 (1998) 1633-1648
3. Becskei A., and Serrano L. Nature 405 (2000) 590-593
4. Becskei A., Seraphin B., and Serrano L. EMBO J. 20 (2001) 2528-2535
5. Becskei A., Kaufmann B.B., and van Oudenaarden A. Natural Genetics 37 (2005) 973-1044
6. Berg O.G., Paulsson J., and Ehrenberg M. Biophys. J. 79 (2000) 2944-2953
7. Cherry J.L., and Adler F.R. J. Theor. Biol. 203 (2000) 117-133
8. Cinquin O., and Demongeot J. J. Theor. Biol. 216 (2002) 229-241
9. Hasty J., and Collings J.J. Nature Genetics 31 (2002) 13-14
10. Hasty J., Pradines J., Dolink M., and Collins J.J. Proc. Natl Acad. Sci. 97 (2000) 2075-2080
11. Isaacs F.J., Hasty J., Cantor C.R., and Collins J.J. Proc. Natl Acad. Sci. 100 (2003) 7714-7719
12. Kaern, M., 2003. Regulatory dynamics in engineered gene networks-the physico-chemical foundation of transcriptional regulation with application to systems biology, ICBS 2003, Fourth International Conference on Systems Biology.
13. Keller A.D. J. Theor. Biol. 172 (1995) 169-185
14. Kepler T.B., and Elston T.C. Biophys. J. 81 (2001) 3116-3136
15. MacAdams H.H., and Arkin A. Proc. Natl Acad. Sci. 94 (1997) 814-819
16. Ozbudak E.M., Thattai M., Kurtser I., Grossman A.D., and van Oudenaarden A. Nature Genetics 31 (2002) 69-73
17. Paulsson J. Nature 427 (2004) 415-418
18. Paulsson J. Natural Genetics 37 (2005) 923-926
19. Paulsson J., and Ehrenberg M. Phys. Rev. Lett. 84 (2000) 5447-5450
20. Paulsson J., Berg O.G., and Ehrenberg M. Proc. Natl Acad. Sci. 97 (2000) 7148-7153
21. Raser J.M., and O'Shea E.K. Science 309 (2005) 2010-2013
22. Sasai M., and Wolynes P.G. Proc. Natl Acad. Sci. 100 (2003) 2374-2379
23. Simpson M.L., Cox C.D., and Sayler G.S. Proc. Natl Acad. Sci. 100 (2003) 4551-4556
24. Smolen P., Baxter D.A., and Byrne J.H. Am. J. Cell Physiol. 274 (1998) 531-542
25. Soong T.T. Random Differential Equations in Science and Engineering (1973), Academic Press, New York and London
26. Swain P.S., Elowitz M.B., and Siggia E.D. Proc. Natl Acad. Sci. 99 (2002) 12795-12800
27. Tao Y., Jia Y.T., and Dewey T.G. J. Chem. Phys. 122 (2005) 124108
28. Thattai M., and van Oudenaarden A. Proc. Natl Acad. Sci. 98 (2001) 8614-8619
29. Thattai M., and van Oudenaarden A. Biophys. J. 82 (2002) 2943-2950
30. Van Kampen N.G. Stochastic Process Theory in Physics and Chemistry (1992), North-Holland, Amsterdam