-
1
-
-
0034118607
-
Rickettsia prowazekii and Bartonella henselae: Differences in the intracellular life styles revisited
-
Andersson SG, Dehio C (2000) Rickettsia prowazekii and Bartonella henselae: differences in the intracellular life styles revisited. Int J Med Microbiol 290:135-141
-
(2000)
Int J Med Microbiol
, vol.290
, pp. 135-141
-
-
Andersson, S.G.1
Dehio, C.2
-
2
-
-
0036841263
-
DNA sequence and mutational analyses of the pVir plasmid of Campylobacter jejuni 81-176
-
Bacon DJ, Alm RA, Hu L, Hickey TE, Ewing CP, Batchelor RA, Trust TJ, Guerry P (2002) DNA sequence and mutational analyses of the pVir plasmid of Campylobacter jejuni 81-176. Infect Immun 70:6242-6250
-
(2002)
Infect Immun
, vol.70
, pp. 6242-6250
-
-
Bacon, D.J.1
Alm, R.A.2
Hu, L.3
Hickey, T.E.4
Ewing, C.P.5
Batchelor, R.A.6
Trust, T.J.7
Guerry, P.8
-
3
-
-
0033612136
-
Comparative genomics of BCG vaccines by whole-genome DNA microarray
-
Behr MA, Wilson MA, Gill WP, Salamon H, Schoolnik GK, Rane S, Small PM (1999) Comparative genomics of BCG vaccines by whole-genome DNA microarray. Science 284:1520-1523
-
(1999)
Science
, vol.284
, pp. 1520-1523
-
-
Behr, M.A.1
Wilson, M.A.2
Gill, W.P.3
Salamon, H.4
Schoolnik, G.K.5
Rane, S.6
Small, P.M.7
-
4
-
-
33645115674
-
Assessing genetic diversity in plasmids from Escherichia coli and Salmonella enterica using a mixed-plasmid microarray
-
Call DR, Kang MS, Daniels J, Besser TE (2006) Assessing genetic diversity in plasmids from Escherichia coli and Salmonella enterica using a mixed-plasmid microarray. J Appl Microbiol 100:15-28
-
(2006)
J Appl Microbiol
, vol.100
, pp. 15-28
-
-
Call, D.R.1
Kang, M.S.2
Daniels, J.3
Besser, T.E.4
-
5
-
-
0037224655
-
Genomic comparison of Salmonella enterica serovars and Salmonella bongori by use of an S. enterica serovar typhimurium DNA microarray
-
Chan K, Baker S, Kim CC, Detweiler CS, Dougan G, Falkow S (2003) Genomic comparison of Salmonella enterica serovars and Salmonella bongori by use of an S. enterica serovar typhimurium DNA microarray. J Bacteriol 185:553-563
-
(2003)
J Bacteriol
, vol.185
, pp. 553-563
-
-
Chan, K.1
Baker, S.2
Kim, C.C.3
Detweiler, C.S.4
Dougan, G.5
Falkow, S.6
-
6
-
-
84936916896
-
Robust locally weighted regression and smoothing scatterplots
-
Cleveland W (1979) Robust locally weighted regression and smoothing scatterplots. J Am Stat Assoc 74:829-836
-
(1979)
J Am Stat Assoc
, vol.74
, pp. 829-836
-
-
Cleveland, W.1
-
7
-
-
1442349821
-
Interconnection of competence, stress and CiaR regulons in Streptococcus pneumoniae: Competence triggers stationary phase autolysis of ciaR mutant cells
-
Dagkessamanskaia A, Moscoso M, Henard V, Guiral S, Overweg K, Reuter M, Martin B, Wells JM, Claverys J (2004) Interconnection of competence, stress and CiaR regulons in Streptococcus pneumoniae: competence triggers stationary phase autolysis of ciaR mutant cells. Mol Microbiol 51:1071-1086
-
(2004)
Mol Microbiol
, vol.51
, pp. 1071-1086
-
-
Dagkessamanskaia, A.1
Moscoso, M.2
Henard, V.3
Guiral, S.4
Overweg, K.5
Reuter, M.6
Martin, B.7
Wells, J.M.8
Claverys, J.9
-
8
-
-
0035318378
-
Genomic interspecies microarray hybridization: Rapid discovery of three thousand genes in the maize endophyte, Klebsiella pneumoniae 342, by microarray hybridization with Escherichia coli K-12 open reading frames
-
Dong Y, Glasner JD, Blattner FR, Triplett EW (2001) Genomic interspecies microarray hybridization: rapid discovery of three thousand genes in the maize endophyte, Klebsiella pneumoniae 342, by microarray hybridization with Escherichia coli K-12 open reading frames. Appl Environ Microbiol 67:1911-1921
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 1911-1921
-
-
Dong, Y.1
Glasner, J.D.2
Blattner, F.R.3
Triplett, E.W.4
-
9
-
-
0036777599
-
Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains
-
Fleischmann RD, Alland D, Eisen JA, Carpenter L, White O, Peterson J, DeBoy R, Dodson R, Gwinn M, Haft D, Hickey E, Kolonay JF, Nelson WC, Umayam LA, Ermolaeva M, Salzberg SL, Delcher A, Utterback T, Weidman J, Khouri H, Gill J, Mikula A, Bishai W, Jacobs WR Jr, Venter JC, Fraser CM (2002) Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains. J Bacteriol 184:5479-5490
-
(2002)
J Bacteriol
, vol.184
, pp. 5479-5490
-
-
Fleischmann, R.D.1
Alland, D.2
Eisen, J.A.3
Carpenter, L.4
White, O.5
Peterson, J.6
DeBoy, R.7
Dodson, R.8
Gwinn, M.9
Haft, D.10
Hickey, E.11
Kolonay, J.F.12
Nelson, W.C.13
Umayam, L.A.14
Ermolaeva, M.15
Salzberg, S.L.16
Delcher, A.17
Utterback, T.18
Weidman, J.19
Khouri, H.20
Gill, J.21
Mikula, A.22
Bishai, W.23
Jacobs Jr., W.R.24
Venter, J.C.25
Fraser, C.M.26
more..
-
10
-
-
30744473742
-
Whole-genome comparison between Photorhabdus strains to identify genomic regions involved in the specificity of nematode interaction
-
Gaudriault S, Duchaud E, Lanois A, Canoy AS, Bourot S, Derose R, Kunst F, Boemare N, Givaudan A (2006) Whole-genome comparison between Photorhabdus strains to identify genomic regions involved in the specificity of nematode interaction. J Bacteriol 188:809-814
-
(2006)
J Bacteriol
, vol.188
, pp. 809-814
-
-
Gaudriault, S.1
Duchaud, E.2
Lanois, A.3
Canoy, A.S.4
Bourot, S.5
Derose, R.6
Kunst, F.7
Boemare, N.8
Givaudan, A.9
-
12
-
-
0035807814
-
Helicobacter pylori genetic diversity within the gastric niche of a single human host
-
Israel DA, Salama N, Krishna U, Rieger UM, Atherton JC, Falkow S, Peek RM Jr (2001) Helicobacter pylori genetic diversity within the gastric niche of a single human host. Proc Natl Acad Sci U S A 98:14625-14630
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 14625-14630
-
-
Israel, D.A.1
Salama, N.2
Krishna, U.3
Rieger, U.M.4
Atherton, J.C.5
Falkow, S.6
Peek Jr., R.M.7
-
13
-
-
0038752612
-
Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis
-
Ivanova N, Sorokin A, Anderson I, Galleron N, Candelon B, Kapatral V, Bhattacharyya A, Reznik G, Mikhailova N, Lapidus A, Chu L, Mazur M, Goltsman E, Larsen N, D'Souza M, Walunas T, Grechkin Y, Pusch G, Haselkorn R, Fonstein M, Ehrlich SD, Overbeek R, Kyrpides N (2003) Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis. Nature 423:87-91
-
(2003)
Nature
, vol.423
, pp. 87-91
-
-
Ivanova, N.1
Sorokin, A.2
Anderson, I.3
Galleron, N.4
Candelon, B.5
Kapatral, V.6
Bhattacharyya, A.7
Reznik, G.8
Mikhailova, N.9
Lapidus, A.10
Chu, L.11
Mazur, M.12
Goltsman, E.13
Larsen, N.14
D'Souza, M.15
Walunas, T.16
Grechkin, Y.17
Pusch, G.18
Haselkorn, R.19
Fonstein, M.20
Ehrlich, S.D.21
Overbeek, R.22
Kyrpides, N.23
more..
-
14
-
-
0037195198
-
Improved analytical methods for microarray-based genome-composition analysis
-
RESEARCH0065
-
Kim CC, Joyce EA, Chan K, Falkow S (2002) Improved analytical methods for microarray-based genome-composition analysis. Genome Biol 3:RESEARCH0065
-
(2002)
Genome Biol
, vol.3
-
-
Kim, C.C.1
Joyce, E.A.2
Chan, K.3
Falkow, S.4
-
17
-
-
0035859896
-
DNA/DNA hybridization to microarrays reveals gene-specific differences between closely related microbial genomes
-
Murray AE, Lies D, Li G, Nealson K, Zhou J, Tiedje JM (2001) DNA/DNA hybridization to microarrays reveals gene-specific differences between closely related microbial genomes. Proc Natl Acad Sci U S A 98:9853-9858
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 9853-9858
-
-
Murray, A.E.1
Lies, D.2
Li, G.3
Nealson, K.4
Zhou, J.5
Tiedje, J.M.6
-
19
-
-
0042355274
-
Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica
-
Parkhill J, Sebaihia M, Preston A, Murphy LD, Thomson N, Harris DE, Holden MT, Churcher CM, Bentley SD, Mungall KL, Cerdeno-Tarraga AM, Temple L, James K, Harris B, Quail MA, Achtman M, Atkin R, Baker S, Basham D, Bason N, Cherevach I, Chillingworth T, Collins M, Cronin A, Davis P, Doggett J, Feltwell T, Goble A, Hamlin N, Hauser H, Holroyd S, Jagels K, Leather S, Moule S, Norberczak H, O'Neil S, Ormond D, Price C, Rabbinowitsch E, Rutter S, Sanders M, Saunders D, Seeger K, Sharp S, Simmonds M, Skelton J, Squares R, Squares S, Stevens K, Unwin L, Whitehead S, Barrell BG, Maskell DJ (2003) Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica. Nat Genet 35:32-40
-
(2003)
Nat Genet
, vol.35
, pp. 32-40
-
-
Parkhill, J.1
Sebaihia, M.2
Preston, A.3
Murphy, L.D.4
Thomson, N.5
Harris, D.E.6
Holden, M.T.7
Churcher, C.M.8
Bentley, S.D.9
Mungall, K.L.10
Cerdeno-Tarraga, A.M.11
Temple, L.12
James, K.13
Harris, B.14
Quail, M.A.15
Achtman, M.16
Atkin, R.17
Baker, S.18
Basham, D.19
Bason, N.20
Cherevach, I.21
Chillingworth, T.22
Collins, M.23
Cronin, A.24
Davis, P.25
Doggett, J.26
Feltwell, T.27
Goble, A.28
Hamlin, N.29
Hauser, H.30
Holroyd, S.31
Jagels, K.32
Leather, S.33
Moule, S.34
Norberczak, H.35
O'Neil, S.36
Ormond, D.37
Price, C.38
Rabbinowitsch, E.39
Rutter, S.40
Sanders, M.41
Saunders, D.42
Seeger, K.43
Sharp, S.44
Simmonds, M.45
Skelton, J.46
Squares, R.47
Squares, S.48
Stevens, K.49
Unwin, L.50
Whitehead, S.51
Barrell, B.G.52
Maskell, D.J.53
more..
-
20
-
-
0142246576
-
Comparative genome analysis of Campylobacter jejuni using whole genome DNA microarrays
-
Pearson BM, Pin C, Wright J, I'Anson K, Humphrey T, Wells JM (2003) Comparative genome analysis of Campylobacter jejuni using whole genome DNA microarrays. FEBS Lett 554:224-230
-
(2003)
FEBS Lett
, vol.554
, pp. 224-230
-
-
Pearson, B.M.1
Pin, C.2
Wright, J.3
I'Anson, K.4
Humphrey, T.5
Wells, J.M.6
-
21
-
-
0036893449
-
Comparative genomics identifies the genetic islands that distinguish Neisseria meningitidis, the agent of cerebrospinal meningitis, from other Neisseria species
-
Perrin A, Bonacorsi S, Carbonnelle E, Talibi D, Dessen P, Nassif X, Tinsley C (2002) Comparative genomics identifies the genetic islands that distinguish Neisseria meningitidis, the agent of cerebrospinal meningitis, from other Neisseria species. Infect Immun 70:7063-7072
-
(2002)
Infect Immun
, vol.70
, pp. 7063-7072
-
-
Perrin, A.1
Bonacorsi, S.2
Carbonnelle, E.3
Talibi, D.4
Dessen, P.5
Nassif, X.6
Tinsley, C.7
-
22
-
-
0037173117
-
Evolutionary genomics of Salmonella: Gene acquisitions revealed by microarray analysis
-
Porwollik S, Wong RM, McClelland M (2002) Evolutionary genomics of Salmonella: gene acquisitions revealed by microarray analysis. Proc Natl Acad Sci U S A 99:8956-8961
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 8956-8961
-
-
Porwollik, S.1
Wong, R.M.2
McClelland, M.3
-
23
-
-
0036898577
-
Microarray data normalization and transformation
-
Quackenbush J (2002) Microarray data normalization and transformation. Nat Genet 32 Suppl:496-501
-
(2002)
Nat Genet
, vol.32
, Issue.SUPPL.
, pp. 496-501
-
-
Quackenbush, J.1
-
24
-
-
0035895278
-
Genetic architecture of thermal adaptation in Escherichia coli
-
Riehle MM, Bennett AF, Long AD (2001) Genetic architecture of thermal adaptation in Escherichia coli. Proc Natl Acad Sci USA 98:525-530
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 525-530
-
-
Riehle, M.M.1
Bennett, A.F.2
Long, A.D.3
-
25
-
-
0029812283
-
A DNA microarray system for analyzing complex DNA samples using two-color fluorescent probe hybridization
-
Shalon D, Smith SJ, Brown PO (1996) A DNA microarray system for analyzing complex DNA samples using two-color fluorescent probe hybridization. Genome Res 6:639-645
-
(1996)
Genome Res
, vol.6
, pp. 639-645
-
-
Shalon, D.1
Smith, S.J.2
Brown, P.O.3
-
26
-
-
17644379085
-
Evaluation of custom-made DNA microarrays for multilocus sequence typing of Neisseria meningitidis
-
Swiderek H, Claus H, Frosch M, Vogel U (2005) Evaluation of custom-made DNA microarrays for multilocus sequence typing of Neisseria meningitidis. Int J Med Microbiol 295:39-45
-
(2005)
Int J Med Microbiol
, vol.295
, pp. 39-45
-
-
Swiderek, H.1
Claus, H.2
Frosch, M.3
Vogel, U.4
-
27
-
-
25444483377
-
A new approach for the analysis of bacterial microarray-based comparative genomic hybridization: Insights from an empirical study
-
Taboada EN, Acedillo RR, Luebbert CC, Findlay WA, Nash JH (2005) A new approach for the analysis of bacterial microarray-based comparative genomic hybridization: insights from an empirical study. BMC Genomics 6:78
-
(2005)
BMC Genomics
, vol.6
, pp. 78
-
-
Taboada, E.N.1
Acedillo, R.R.2
Luebbert, C.C.3
Findlay, W.A.4
Nash, J.H.5
-
28
-
-
0037125989
-
Complete genome sequence and comparative genomic analysis of an emerging human pathogen, serotype V Streptococcus agalactiae
-
Tettelin H, Masignani V, Cieslewicz MJ, Eisen JA, Peterson S, Wessels MR, Paulsen IT, Nelson KE, Margarit I, Read TD, Madoff LC, Wolf AM, Beanan MJ, Brinkac LM, Daugherty SC, DeBoy RT, Durkin AS, Kolonay JF, Madupu R, Lewis MR, Radune D, Fedorova NB, Scanlan D, Khouri H, Mulligan S, Carty HA, Cline RT, Van Aken SE, Gill J, Scarselli M, Mora M, Iacobini ET, Brettoni C, Galli G, Mariani M, Vegni F, Maione D, Rinaudo D, Rappuoli R, Telford JL, Kasper DL, Grandi G, Fraser CM (2002) Complete genome sequence and comparative genomic analysis of an emerging human pathogen, serotype V Streptococcus agalactiae. Proc Natl Acad Sci U S A 99:12391-12396
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 12391-12396
-
-
Tettelin, H.1
Masignani, V.2
Cieslewicz, M.J.3
Eisen, J.A.4
Peterson, S.5
Wessels, M.R.6
Paulsen, I.T.7
Nelson, K.E.8
Margarit, I.9
Read, T.D.10
Madoff, L.C.11
Wolf, A.M.12
Beanan, M.J.13
Brinkac, L.M.14
Daugherty, S.C.15
Deboy, R.T.16
Durkin, A.S.17
Kolonay, J.F.18
Madupu, R.19
Lewis, M.R.20
Radune, D.21
Fedorova, N.B.22
Scanlan, D.23
Khouri, H.24
Mulligan, S.25
Carty, H.A.26
Cline, R.T.27
Van Aken, S.E.28
Gill, J.29
Scarselli, M.30
Mora, M.31
Iacobini, E.T.32
Brettoni, C.33
Galli, G.34
Mariani, M.35
Vegni, F.36
Maione, D.37
Rinaudo, D.38
Rappuoli, R.39
Telford, J.L.40
Kasper, D.L.41
Grandi, G.42
Fraser, C.M.43
more..
|