메뉴 건너뛰기




Volumn 56, Issue 9, 2006, Pages 2147-2152

Description of Sphingobium fuliginis sp. nov., a phenanthrene-degrading bacterium from a fly ash dumping site, and reclassification of Sphingomonas cloacae as Sphingobium cloacae comb. nov

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL RNA; GLYCOSPHINGOLIPID; HYDROXY FATTY ACID; NITRATE; PHENANTHRENE; RNA 16S;

EID: 33749001444     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.64080-0     Document Type: Article
Times cited : (53)

References (28)
  • 1
    • 0018651873 scopus 로고
    • Taxonomic and serological studies on Micropolyspora Jaeni and Micropolyspora strains from soil bearing the specific epithet rectivirgula
    • Arden-Jones, M. P., McCarthy, A. J. & Cross, T. (1979). Taxonomic and serological studies on Micropolyspora Jaeni and Micropolyspora strains from soil bearing the specific epithet rectivirgula. J Gen Microbiol 115, 343-354.
    • (1979) J Gen Microbiol , vol.115 , pp. 343-354
    • Arden-Jones, M.P.1    McCarthy, A.J.2    Cross, T.3
  • 3
    • 0001057225 scopus 로고
    • Urea decomposition as a means of differentiating Proteus and paracolon cultures from each other and from Salmonella and Shigella types
    • Christensen, W. B. (1946). Urea decomposition as a means of differentiating Proteus and paracolon cultures from each other and from Salmonella and Shigella types. J Bacteriol 52, 461-466.
    • (1946) J Bacteriol , vol.52 , pp. 461-466
    • Christensen, W.B.1
  • 5
    • 0003437299 scopus 로고
    • Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, USA
    • Felsenstein, J. (1993). PHYLIP - phylogeny inference package, version 3.5c. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, USA.
    • (1993) PHYLIP - Phylogeny Inference Package, Version 3.5c
    • Felsenstein, J.1
  • 6
    • 0035073290 scopus 로고    scopus 로고
    • Sphingomonas cloacae sp. nov., a nonylphenol-degrading bacterium isolated from wastewater of a sewage-treatment plant in Tokyo
    • Fujii, K., Urano, N., Ushio, H., Satomi, M. & Kimura, S. (2001). Sphingomonas cloacae sp. nov., a nonylphenol-degrading bacterium isolated from wastewater of a sewage-treatment plant in Tokyo. Int J Syst Evol Microbiol 51, 603-610.
    • (2001) Int J Syst Evol Microbiol , vol.51 , pp. 603-610
    • Fujii, K.1    Urano, N.2    Ushio, H.3    Satomi, M.4    Kimura, S.5
  • 7
    • 0035171412 scopus 로고    scopus 로고
    • Pigment and virulence deficiencies associated with mutations in the aroE gene of Xanthomonas oryzae pv. oryzae
    • Goel, A. K, Rajagopal, L. & Sonti, R. V. (2001). Pigment and virulence deficiencies associated with mutations in the aroE gene of Xanthomonas oryzae pv. oryzae. Appl Environ Microbial 67, 245-250.
    • (2001) Appl Environ Microbial , vol.67 , pp. 245-250
    • Goel, A.K.1    Rajagopal, L.2    Sonti, R.V.3
  • 9
    • 0018639811 scopus 로고
    • The pigment of Pseudomonas paucimobilis is a carotenoid (nostoxanthin), rather than a brominated aryl-polyene (xanthomonadin)
    • Jenkins, C. L., Andrewes, A. G., McQuade, T. J. & Start, M. P. (1979). The pigment of Pseudomonas paucimobilis is a carotenoid (nostoxanthin), rather than a brominated aryl-polyene (xanthomonadin). Curr Microbiol 3, 1-4.
    • (1979) Curr Microbiol , vol.3 , pp. 1-4
    • Jenkins, C.L.1    Andrewes, A.G.2    McQuade, T.J.3    Start, M.P.4
  • 10
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • In Edited by H. N. Munro. New York: Academic Press
    • Jukes, T. & Cantor, C. R. (1969). Evolution of protein molecules. In Mammalian Protein Metabolism, pp. 21-132. Edited by H. N. Munro. New York: Academic Press.
    • (1969) Mammalian Protein Metabolism , pp. 21-132
    • Jukes, T.1    Cantor, C.R.2
  • 11
    • 0034786650 scopus 로고    scopus 로고
    • Cloning and partial characterization of putative rifamycin biosynthetic gene cluster from actinomycete Amycolatopsis mediterranei DSM 46095
    • Kaur, H., Cortes, J., Leadlay, P. & Lai, R. (2001). Cloning and partial characterization of putative rifamycin biosynthetic gene cluster from actinomycete Amycolatopsis mediterranei DSM 46095. Microbiol Res 165, 239-246.
    • (2001) Microbiol Res , vol.165 , pp. 239-246
    • Kaur, H.1    Cortes, J.2    Leadlay, P.3    Lai, R.4
  • 12
    • 0020032152 scopus 로고
    • Phenanthrene degrading phenotype of Alcaligenes faecalis AFK2
    • Kiyohara, H., Nagao, K., Kouno, K. & Yano, K. (1982). Phenanthrene degrading phenotype of Alcaligenes faecalis AFK2. Appl Environ Microbial 43, 458-461.
    • (1982) Appl Environ Microbial , vol.43 , pp. 458-461
    • Kiyohara, H.1    Nagao, K.2    Kouno, K.3    Yano, K.4
  • 13
    • 0023752959 scopus 로고
    • Fatty acids, antibiotic resistance, and deoxyribonucleic acid homology groups of Bradyrhizobium japonicum
    • Kuykendall, L. D., Roy, M. A., O'Neill, J. J. & Devine, T. E. (1988). Fatty acids, antibiotic resistance, and deoxyribonucleic acid homology groups of Bradyrhizobium japonicum. Int J Syst Bacteriol 38, 358-361.
    • (1988) Int J Syst Bacteriol , vol.38 , pp. 358-361
    • Kuykendall, L.D.1    Roy, M.A.2    O'Neill, J.J.3    Devine, T.E.4
  • 15
    • 0021336449 scopus 로고
    • A taxonomic study of Thermomonospora and other monosporic actinomycetes
    • McCarthy, A. J. & Cross, T. (1984). A taxonomic study of Thermomonospora and other monosporic actinomycetes. J Gen Microbiol 130, 5-25.
    • (1984) J Gen Microbiol , vol.130 , pp. 5-25
    • McCarthy, A.J.1    Cross, T.2
  • 16
    • 0019982011 scopus 로고
    • A single derivatization method for bacterial fatty acid methyl esters including hydroxyl acids
    • Miller, L. T. (1982). A single derivatization method for bacterial fatty acid methyl esters including hydroxyl acids. J Clin Microbiol 16, 584-586.
    • (1982) J Clin Microbiol , vol.16 , pp. 584-586
    • Miller, L.T.1
  • 17
    • 26244458524 scopus 로고    scopus 로고
    • Hexachlorocyclohexane-degrading bacterial strains Sphingomonas paucimobilis B90A, UT26 and Sp+, having similar lin genes, represent three distinct species, Sphingobium indicum sp. nov., Sphingobium japonicum sp. nov. and Sphingobium francense sp. nov., and reclassification of [Sphingomonas] chungbukensis as Sphingobium chungbukense comb. nov
    • & 8 other authors
    • Pal, R., Bala, S., Dadhwal, M. & 8 other authors (2005). Hexachlorocyclohexane-degrading bacterial strains Sphingomonas paucimobilis B90A, UT26 and Sp+, having similar lin genes, represent three distinct species, Sphingobium indicum sp. nov., Sphingobium japonicum sp. nov. and Sphingobium francense sp. nov., and reclassification of [Sphingomonas] chungbukensis as Sphingobium chungbukense comb. nov. Int J Syst Evol Microbiol 55, 1965-1972.
    • (2005) Int J Syst Evol Microbiol , vol.55 , pp. 1965-1972
    • Pal, R.1    Bala, S.2    Dadhwal, M.3
  • 18
    • 0022480743 scopus 로고
    • An ultrastructural study on the effects of phenanthrene on lysosomal membranes and distribution of the lysosomal enzyme β-glucuronidase in digestive cells of the periwinkle Littorina littorea
    • Pipe, R. K. & Moore, M. N. (1986). An ultrastructural study on the effects of phenanthrene on lysosomal membranes and distribution of the lysosomal enzyme β-glucuronidase in digestive cells of the periwinkle Littorina littorea. Aquat Toxicol 8, 65-76.
    • (1986) Aquat Toxicol , vol.8 , pp. 65-76
    • Pipe, R.K.1    Moore, M.N.2
  • 19
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 20
    • 0033492460 scopus 로고    scopus 로고
    • Degradation of phenanthrene by different bacteria: Evidence for novel transformation sequences involving the formation of 1-naphthol
    • Samanta, S. K., Chakraborti, A. K. & Jain, R. K (1999). Degradation of phenanthrene by different bacteria: evidence for novel transformation sequences involving the formation of 1-naphthol. Appl Microbiol Biotechnol 53, 98-107.
    • (1999) Appl Microbiol Biotechnol , vol.53 , pp. 98-107
    • Samanta, S.K.1    Chakraborti, A.K.2    Jain, R.K.3
  • 21
    • 0034919134 scopus 로고    scopus 로고
    • Proposal of the genus Sphingomonas sensu stricto and three new genera, Sphingobium, Novosphingobium and Sphingopyxis, on the basis of phylogenetic and chemotaxonomic analysis
    • Takeuchi, M., Hamana, K. & Hiraishi, A. (2001). Proposal of the genus Sphingomonas sensu stricto and three new genera, Sphingobium, Novosphingobium and Sphingopyxis, on the basis of phylogenetic and chemotaxonomic analysis. Int J Syst Evol Microbiol 51, 1405-1417.
    • (2001) Int J Syst Evol Microbiol , vol.51 , pp. 1405-1417
    • Takeuchi, M.1    Hamana, K.2    Hiraishi, A.3
  • 22
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., Gibson, T. J., Pleviniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Pleviniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 23
    • 0025324750 scopus 로고
    • A comparative study of the lipid composition of Halobacterium saccharovorum from various sources
    • Tindall, B. J. (1990a). A comparative study of the lipid composition of Halobacterium saccharovorum from various sources. Syst Appl Microbiol 13, 128-130.
    • (1990) Syst Appl Microbiol , vol.13 , pp. 128-130
    • Tindall, B.J.1
  • 24
    • 0025098748 scopus 로고
    • Lipid composition of Halobacterium lacusprofundi
    • Tindall, B. J. (1990b). Lipid composition of Halobacterium lacusprofundi. FEMS Microbiol Lett 66, 199-202.
    • (1990) FEMS Microbiol Lett , vol.66 , pp. 199-202
    • Tindall, B.J.1
  • 25
    • 0345327871 scopus 로고    scopus 로고
    • Sphingobium amiense sp. nov., a novel nonylphenol-degrading bacterium isolated from a river sediment
    • Ushiba, Y., Takahara, Y. & Ohta, H. (2003). Sphingobium amiense sp. nov., a novel nonylphenol-degrading bacterium isolated from a river sediment. Int J Syst Evol Microbiol 53, 2045-2048.
    • (2003) Int J Syst Evol Microbiol , vol.53 , pp. 2045-2048
    • Ushiba, Y.1    Takahara, Y.2    Ohta, H.3
  • 26
    • 0000770675 scopus 로고
    • Report of the ad hoc committee on reconciliation of approaches to bacterial systematic
    • & 9 other authors International Committee on Systematic Bacteriology
    • Wayne, L. G., Brenner, D. J., Colwell, R. R. & 9 other authors (1987). International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematic. Int J Syst Bacteriol 37, 463-464.
    • (1987) Int J Syst Bacteriol , vol.37 , pp. 463-464
    • Wayne, L.G.1    Brenner, D.J.2    Colwell, R.R.3
  • 27
    • 0025219590 scopus 로고
    • Proposal of Sphingomonas paucimobilis gen. nov. and comb. nov., Sphingomonas parapaucimobilis sp. nov., Sphingomonas yanoikuyae sp. nov., Sphingomonas adhaesiva sp. nov., Sphingomonas capsulate comb. nov. and two genospecies of the genus Sphingomonas
    • Yabuuchi, E., Yano, I., Oyaizu, H., Hashimoto, Y., Ezaki, T. & Yamamoto, H. (1990). Proposal of Sphingomonas paucimobilis gen. nov. and comb. nov., Sphingomonas parapaucimobilis sp. nov., Sphingomonas yanoikuyae sp. nov., Sphingomonas adhaesiva sp. nov., Sphingomonas capsulate comb. nov. and two genospecies of the genus Sphingomonas. Microbiol Immunol 34, 99-119.
    • (1990) Microbiol Immunol , vol.34 , pp. 99-119
    • Yabuuchi, E.1    Yano, I.2    Oyaizu, H.3    Hashimoto, Y.4    Ezaki, T.5    Yamamoto, H.6
  • 28
    • 0036737838 scopus 로고    scopus 로고
    • Emendation of the genus Sphingomonas Yabuuchi et al. 1990 and junior objective synonymy of the species of three genera, Sphingobium, Novosphingobium and Sphingopyxis, in conjunction with Blastomonas ursincola
    • Yabuuchi, E., Kosako, Y., Fujiwara, N., Naka, T., Matsunaga, I., Ogura, H. & Kabayashi, K. (2002). Emendation of the genus Sphingomonas Yabuuchi et al. 1990 and junior objective synonymy of the species of three genera, Sphingobium, Novosphingobium and Sphingopyxis, in conjunction with Blastomonas ursincola. Int J Syst Evol Microbiol 52, 1485-1496.
    • (2002) Int J Syst Evol Microbiol , vol.52 , pp. 1485-1496
    • Yabuuchi, E.1    Kosako, Y.2    Fujiwara, N.3    Naka, T.4    Matsunaga, I.5    Ogura, H.6    Kabayashi, K.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.