Selective ion-binding by protein probed with the 3D-RISM theory

Journal of the American Chemical Society

Volumn 128, Issue 37, 2006, Pages 12042-12043

  Yoshida, Norio ^a   Phongphanphanee, Saree ^b   Maruyama, Yutaka ^a   Imai, Takashi ^c   Hirata, Fumio ^a,b  

^a INSTITUTE FOR MOLECULAR SCIENCE   (Japan)

^b GRADUATE UNIVERSITY FOR ADVANCED STUDIES   (Japan)

^c RITSUMEIKAN UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

CALCIUM ION; CHLORIDE ION; LYSOZYME; MUTANT PROTEIN; POTASSIUM ION; PROTEIN; SODIUM ION; WATER;

ARTICLE; DIELECTRIC CONSTANT; HUMAN; MOLECULAR RECOGNITION; MOLECULE; PROTEIN STRUCTURE; TEMPERATURE; THEORY; THERMODYNAMICS;

CALCIUM; CATIONS, DIVALENT; HUMANS; MODELS, MOLECULAR; MURAMIDASE; PROTEIN BINDING; THERMODYNAMICS; WATER;

EID: 33748787997     PISSN: 00027863     EISSN: None     Source Type: Journal    
DOI: 10.1021/ja0633262     Document Type: Article

References (17)

1. Hille, B. Ionic Channels of Excitable Membranes; Sinauer Associates; Sunderland, MA, 2001.
2. (a) Aqvist, J.; Luzhkov, V. B. Nature 2000, 404, 881.
3. (b) Luzhkov, V. B.; Aqvist, J. Biochim. Biophys. Acta 2001, 1548, 194.
4. Kovalenko, A.; Hirata, F. Chem. Phys. Lett. 1998, 290, 237.
5. Imai, T.; Hiraoka, R.; Kovalenko, A.; Hirata, F. J. Am. Chem. Soc. 2005, 127, 15335.
6. Evans, J. Chem. World 2005, 2 (12), 15.
7. Kuroki, R.; Yutani, K. J. Biol. Chem. 1998, 273, 34310.
8. Kovalenko, A.; Hirata, F. J. Chem. Phys. 1999, 110, 10095.
9. Berendsen, H. J. C.; Postma, J. P. M.; van Gunstern, E. F.; Hermans, J. lntermolecular Forces; Pullman, B., Ed.; Reidel: Dordrecht, The Netherlands, 1981.
10. Chandrasekhar, J.; Spellmeyer, D. C.; Jorgensen, W. L. J. Am. Chem. Soc. 1984, 106, 903.
11. Aqvist, J. J. Phys. Chem. 1990, 94, 8021.
12. Wang, J.; Cieplak, P.; Kollman, P. A. J. Comput. Chem. 2000, 21, 1049.
13. Artymiuk, P. J.; Blake, C. C. F. J. Mol. Biol. 1981, 152, 737.
14. Inaka, K.; Matsushima, M. J. Biol. Chem. 1992, 266, 20666.
15. (a) Laaksonen, L. J. Mol. Graph. 1992, 10, 33.
16. (b) Bergman, D. L.; Laaksonen, L.; Laaksonen, A. J. Mol. Graphics Modell. 1997, 15, 301.
17. Doyle, D. A.; Cabral, J. M.; Pfuetzner, R. A.; Kuo, A.; Guibis, J. M.; Cohen, S. L.; Chait, B. T.; MacKinnon, R. Science 1998, 280, 69.