메뉴 건너뛰기




Volumn 80, Issue 17, 2006, Pages 8316-8328

Inducible yeast system for viral RNA recombination reveals requirement for an RNA replication signal on both parental RNAs

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA; VIRUS RNA;

EID: 33748656721     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/JVI.01790-05     Document Type: Article
Times cited : (17)

References (43)
  • 1
    • 0035950608 scopus 로고    scopus 로고
    • Characterization and template properties of RNA dimers generated during flock house virus RNA replication
    • Albarino, C. G., B. D. Price, L. D. Eckerle, and L. A. Ball. 2001. Characterization and template properties of RNA dimers generated during flock house virus RNA replication. Virology 289:269-282.
    • (2001) Virology , vol.289 , pp. 269-282
    • Albarino, C.G.1    Price, B.D.2    Eckerle, L.D.3    Ball, L.A.4
  • 2
    • 0024724209 scopus 로고
    • Sequence of cowpea chlorotic mottle virus RNAs 2 and 3 and evidence of a recombination event during bromovirus evolution
    • Allison, R. F., M. Janda, and P. Ahlquist. 1989. Sequence of cowpea chlorotic mottle virus RNAs 2 and 3 and evidence of a recombination event during bromovirus evolution. Virology 172:321-330.
    • (1989) Virology , vol.172 , pp. 321-330
    • Allison, R.F.1    Janda, M.2    Ahlquist, P.3
  • 3
    • 0022524928 scopus 로고
    • Genetic recombination between RNA components of a multipartite plant virus
    • Bujarski, J. J., and P. Kaesberg. 1986. Genetic recombination between RNA components of a multipartite plant virus. Nature 321:528-531.
    • (1986) Nature , vol.321 , pp. 528-531
    • Bujarski, J.J.1    Kaesberg, P.2
  • 4
    • 0035103905 scopus 로고    scopus 로고
    • Brome mosaic virus protein 1a recruits viral RNA2 to RNA replication through a 5′ proximal RNA2 signal
    • Chen, J., A. Noueiry, and P. Ahlquist. 2001. Brome mosaic virus protein 1a recruits viral RNA2 to RNA replication through a 5′ proximal RNA2 signal. J. Virol. 75:3207-3219.
    • (2001) J. Virol. , vol.75 , pp. 3207-3219
    • Chen, J.1    Noueiry, A.2    Ahlquist, P.3
  • 5
    • 0028925494 scopus 로고
    • Generation of defective interfering RNA dimers of cymbidium ringspot tombusvirus
    • Dalmay, T., G. Szittya, and J. Burgyan. 1995. Generation of defective interfering RNA dimers of cymbidium ringspot tombusvirus. Virology 207:510-517.
    • (1995) Virology , vol.207 , pp. 510-517
    • Dalmay, T.1    Szittya, G.2    Burgyan, J.3
  • 6
    • 0032695133 scopus 로고    scopus 로고
    • Functions of the 3′-untranslated regions of positive strand RNA viral genomes
    • Dreher, T. W. 1999. Functions of the 3′-untranslated regions of positive strand RNA viral genomes. Annu. Rev. Phytopathol. 37:151-174.
    • (1999) Annu. Rev. Phytopathol. , vol.37 , pp. 151-174
    • Dreher, T.W.1
  • 7
    • 0026351774 scopus 로고
    • The nucleotide sequence and genome organization of the RNA-1 segment in two bromoviruses: Broad bean mottle virus and cowpea chlorotic mottle virus
    • Dzianott, A. M., and J. J. Bujarski. 1991. The nucleotide sequence and genome organization of the RNA-1 segment in two bromoviruses: broad bean mottle virus and cowpea chlorotic mottle virus. Virology 185:553-562.
    • (1991) Virology , vol.185 , pp. 553-562
    • Dzianott, A.M.1    Bujarski, J.J.2
  • 8
    • 0036839119 scopus 로고    scopus 로고
    • Recombination of poliovirus RNA proceeds in mixed replication complexes originating from distinct replication start sites
    • Egger, D., and K. Bienz. 2002. Recombination of poliovirus RNA proceeds in mixed replication complexes originating from distinct replication start sites. J. Virol. 76:10960-10971.
    • (2002) J. Virol. , vol.76 , pp. 10960-10971
    • Egger, D.1    Bienz, K.2
  • 9
    • 0013522485 scopus 로고
    • Homologous recombination between episomal plasmids and chromosomes in yeast
    • Falco, S. C., M. Rose, and D. Botstein. 1983. Homologous recombination between episomal plasmids and chromosomes in yeast. Genetics 105:843-856.
    • (1983) Genetics , vol.105 , pp. 843-856
    • Falco, S.C.1    Rose, M.2    Botstein, D.3
  • 10
    • 0024044629 scopus 로고
    • Characterization and engineering of sequences controlling in vivo synthesis of brome mosaic virus subgenomic RNA
    • French, R., and P. Ahlquist. 1988. Characterization and engineering of sequences controlling in vivo synthesis of brome mosaic virus subgenomic RNA. J. Virol. 62:2411-2420.
    • (1988) J. Virol. , vol.62 , pp. 2411-2420
    • French, R.1    Ahlquist, P.2
  • 11
    • 0023264034 scopus 로고
    • Intercistronic as well as terminal sequences are required for efficient amplification of brome mosaic virus RNA3
    • French, R., and P. Ahlquist. 1987. Intercistronic as well as terminal sequences are required for efficient amplification of brome mosaic virus RNA3. J. Virol. 61:1457-1465.
    • (1987) J. Virol. , vol.61 , pp. 1457-1465
    • French, R.1    Ahlquist, P.2
  • 12
    • 0037218643 scopus 로고    scopus 로고
    • Complete nucleotide sequence of spring beauty latent virus, a bromovirus infectious to Arabidopsis thaliana
    • Fujisaki, K., F. Hagihara, M. Kaido, K. Mise, and T. Okuno. 2003. Complete nucleotide sequence of spring beauty latent virus, a bromovirus infectious to Arabidopsis thaliana. Arch. Virol. 148:165-175.
    • (2003) Arch. Virol. , vol.148 , pp. 165-175
    • Fujisaki, K.1    Hagihara, F.2    Kaido, M.3    Mise, K.4    Okuno, T.5
  • 13
    • 2642518680 scopus 로고    scopus 로고
    • RNA recombination in vivo in the absence of viral replication
    • Gallei, A, A. Pankraz, H. J. Thiel, and P. Becher. 2004. RNA recombination in vivo in the absence of viral replication. J. Virol. 78:6271-6281.
    • (2004) J. Virol. , vol.78 , pp. 6271-6281
    • Gallei, A.1    Pankraz, A.2    Thiel, H.J.3    Becher, P.4
  • 15
    • 13744250186 scopus 로고    scopus 로고
    • Mutual interference between genomic RNA replication and subgenomic RNA mRNA transcription in brome mosaic virus
    • Grdzelishvili, V. Z., T. Watanabe, H. Garcia-Ruiz, and P. Ahlquist. 2005. Mutual interference between genomic RNA replication and subgenomic RNA mRNA transcription in brome mosaic virus. J. Virol. 79:1438-1451.
    • (2005) J. Virol. , vol.79 , pp. 1438-1451
    • Grdzelishvili, V.Z.1    Watanabe, T.2    Garcia-Ruiz, H.3    Ahlquist, P.4
  • 16
    • 0033832883 scopus 로고    scopus 로고
    • The 3a cell-to-cell movement gene is dispensable for cell-to-cell transmission of brome mosaic virus RNA replicons in yeast but retained over 10(45)-fold amplification
    • Ishikawa, M., M. Janda, and P. Ahlquist. 2000. The 3a cell-to-cell movement gene is dispensable for cell-to-cell transmission of brome mosaic virus RNA replicons in yeast but retained over 10(45)-fold amplification. J. Gen. Virol. 81:2307-2311.
    • (2000) J. Gen. Virol. , vol.81 , pp. 2307-2311
    • Ishikawa, M.1    Janda, M.2    Ahlquist, P.3
  • 17
    • 0030842610 scopus 로고    scopus 로고
    • In vivo DNA expression of functional brome mosaic virus RNA replicons in Saccharomyces cerevisiae
    • Ishikawa, M., M. Janda, M. A. Krol, and P. Ahlquist. 1997. In vivo DNA expression of functional brome mosaic virus RNA replicons in Saccharomyces cerevisiae. J. Virol. 71:7781-7790.
    • (1997) J. Virol. , vol.71 , pp. 7781-7790
    • Ishikawa, M.1    Janda, M.2    Krol, M.A.3    Ahlquist, P.4
  • 18
    • 0025879363 scopus 로고
    • Biological activities of hybrid RNAs generated by 3′-end exchanges between tobacco mosaic and brome mosaic viruses
    • Ishikawa, M., P. Kroner, P. Ahlquist, and T. Meshi. 1991. Biological activities of hybrid RNAs generated by 3′-end exchanges between tobacco mosaic and brome mosaic viruses. J. Virol. 65:3451-3459.
    • (1991) J. Virol. , vol.65 , pp. 3451-3459
    • Ishikawa, M.1    Kroner, P.2    Ahlquist, P.3    Meshi, T.4
  • 19
    • 0020529962 scopus 로고
    • Transformation of intact yeast cells treated with alkali cations
    • Ho, H., Y. Fukuda, K. Murata, and A. Kimura. 1983. Transformation of intact yeast cells treated with alkali cations. J. Bacteriol. 153:163-168.
    • (1983) J. Bacteriol. , vol.153 , pp. 163-168
    • Ho, H.1    Fukuda, Y.2    Murata, K.3    Kimura, A.4
  • 20
    • 0027469808 scopus 로고
    • RNA-dependent replication, transcription, and persistence of brome mosaic virus RNA replicons in S. cerevisiae
    • Janda, M., and P. Ahlquist. 1993. RNA-dependent replication, transcription, and persistence of brome mosaic virus RNA replicons in S. cerevisiae. Cell 72:961-970.
    • (1993) Cell , vol.72 , pp. 961-970
    • Janda, M.1    Ahlquist, P.2
  • 21
    • 0026623162 scopus 로고
    • Poliovirus RNA recombination: Mechanistic studies in the absence of selection
    • Jarvis, T. C., and K. Kirkegaard. 1992. Poliovirus RNA recombination: mechanistic studies in the absence of selection. EMBO J. 11:3135-3145.
    • (1992) EMBO J. , vol.11 , pp. 3135-3145
    • Jarvis, T.C.1    Kirkegaard, K.2
  • 22
    • 0023017765 scopus 로고
    • The mechanism of RNA recombination in poliovirus
    • Kirkegaard, K., and D. Baltimore. 1986. The mechanism of RNA recombination in poliovirus. Cell 47:433-443.
    • (1986) Cell , vol.47 , pp. 433-443
    • Kirkegaard, K.1    Baltimore, D.2
  • 24
    • 0026602984 scopus 로고
    • RNA recombination in animal and plant viruses
    • Lai, M. M. 1992. RNA recombination in animal and plant viruses. Microbiol. Rev. 56:61-79.
    • (1992) Microbiol. Rev. , vol.56 , pp. 61-79
    • Lai, M.M.1
  • 25
    • 0034885498 scopus 로고    scopus 로고
    • Interactions of the TGB1 protein during cell-to-cell movement of barley stripe mosaic virus
    • Lawrence, D. M., and A. O. Jackson. 2001. Interactions of the TGB1 protein during cell-to-cell movement of barley stripe mosaic virus. J. Virol. 75:8712-8723.
    • (2001) J. Virol. , vol.75 , pp. 8712-8723
    • Lawrence, D.M.1    Jackson, A.O.2
  • 26
    • 0027324884 scopus 로고
    • Nonhomologous RNA recombination during negative-strand synthesis of flock house virus RNA
    • Li, Y., and L. A. Ball. 1993. Nonhomologous RNA recombination during negative-strand synthesis of flock house virus RNA. J. Virol. 67:3854-3860.
    • (1993) J. Virol. , vol.67 , pp. 3854-3860
    • Li, Y.1    Ball, L.A.2
  • 27
    • 0018825109 scopus 로고
    • Synthesis, accumulation and encapsidation of individual brome mosaic virus RNA components in barley protoplasts
    • Loesch-Fries, L. S., and T. C. Hall. 1980. Synthesis, accumulation and encapsidation of individual brome mosaic virus RNA components in barley protoplasts. J. Gen. Virol. 47:323-332.
    • (1980) J. Gen. Virol. , vol.47 , pp. 323-332
    • Loesch-Fries, L.S.1    Hall, T.C.2
  • 28
    • 0020649873 scopus 로고
    • Instability of dicentric plasmids in yeast
    • Mann, C., and R. W. Davis. 1983. Instability of dicentric plasmids in yeast. Proc. Natl. Acad. Sci. USA 80:228-232.
    • (1983) Proc. Natl. Acad. Sci. USA , vol.80 , pp. 228-232
    • Mann, C.1    Davis, R.W.2
  • 29
    • 0028936186 scopus 로고
    • Efficient system of homologous RNA recombination in brome mosaic virus: Sequence and structure requirements and accuracy of crossovers
    • Nagy, P. D., and J. J. Bujarski. 1995. Efficient system of homologous RNA recombination in brome mosaic virus: sequence and structure requirements and accuracy of crossovers. J. Virol. 69:131-140.
    • (1995) J. Virol. , vol.69 , pp. 131-140
    • Nagy, P.D.1    Bujarski, J.J.2
  • 30
    • 0027313424 scopus 로고
    • Targeting the site of RNA-RNA recombination in brome mosaic virus with antisense sequences
    • Nagy, P. D., and J. J. Bujarski. 1993. Targeting the site of RNA-RNA recombination in brome mosaic virus with antisense sequences. Proc. Natl. Acad. Sci. USA 90:6390-6394.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 6390-6394
    • Nagy, P.D.1    Bujarski, J.J.2
  • 31
    • 0028940477 scopus 로고
    • Mutations in the helicase-like domain of protein 1a alter the sites of RNA-RNA recombination in brome mosaic virus
    • Nagy, P. D., A. Dzianott, P. Ahlquist, and J. J. Bujarski. 1995. Mutations in the helicase-like domain of protein 1a alter the sites of RNA-RNA recombination in brome mosaic virus. J. Virol. 69:2547-2556.
    • (1995) J. Virol. , vol.69 , pp. 2547-2556
    • Nagy, P.D.1    Dzianott, A.2    Ahlquist, P.3    Bujarski, J.J.4
  • 32
    • 0141457199 scopus 로고    scopus 로고
    • Yeast as a model host to study replication and recombination of defective interfering RNA of Tomato bushy stunt virus
    • Panavas, T., and P. D. Nagy. 2003. Yeast as a model host to study replication and recombination of defective interfering RNA of Tomato bushy stunt virus. Virology 314:315-325.
    • (2003) Virology , vol.314 , pp. 315-325
    • Panavas, T.1    Nagy, P.D.2
  • 33
    • 0037303222 scopus 로고    scopus 로고
    • Replication of carnation Italian ringspot virus defective interfering RNA in Saccharomyces cerevisiae
    • Pantaleo, V., L. Rubino, and M. Russo. 2003. Replication of carnation Italian ringspot virus defective interfering RNA in Saccharomyces cerevisiae. J. Virol. 77:2116-2123.
    • (2003) J. Virol. , vol.77 , pp. 2116-2123
    • Pantaleo, V.1    Rubino, L.2    Russo, M.3
  • 34
    • 0032812681 scopus 로고    scopus 로고
    • Primer alignment-and-extension': A novel mechanism of viral RNA recombination responsible for the rescue of inactivated poliovirus cDNA clones
    • Pierangeli, A., M. Bucci, M. Forzan, P. Pagnotti, M. Equestre, and R. Perez Bercoff. 1999. 'Primer alignment-and-extension': a novel mechanism of viral RNA recombination responsible for the rescue of inactivated poliovirus cDNA clones. J. Gen. Virol. 80:1889-1897.
    • (1999) J. Gen. Virol. , vol.80 , pp. 1889-1897
    • Pierangeli, A.1    Bucci, M.2    Forzan, M.3    Pagnotti, P.4    Equestre, M.5    Perez Bercoff, R.6
  • 35
    • 0026695941 scopus 로고
    • A simple and highly efficient procedure for rescuing autonomous plasmids from yeast
    • Robzyk, K., and Y. Kassir. 1992. A simple and highly efficient procedure for rescuing autonomous plasmids from yeast. Nucleic Acids Res. 20:3790.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 3790
    • Robzyk, K.1    Kassir, Y.2
  • 36
    • 0021345048 scopus 로고
    • Identification of a Ty insertion within the coding sequence of the S. cerevisiae URA3 gene
    • Rose, M., and F. Winston. 1984. Identification of a Ty insertion within the coding sequence of the S. cerevisiae URA3 gene. Mol. Gen. Genet. 193: 557-560.
    • (1984) Mol. Gen. Genet. , vol.193 , pp. 557-560
    • Rose, M.1    Winston, F.2
  • 38
    • 0036204740 scopus 로고    scopus 로고
    • A positive-strand RNA virus replication complex parallels form and function of retrovirus capsids
    • Schwartz, M., J. Chen, M. Janda, M. Sullivan, J. den Boon, and P. Ahlquist. 2002. A positive-strand RNA virus replication complex parallels form and function of retrovirus capsids. Mol. Cell 9:505-514.
    • (2002) Mol. Cell , vol.9 , pp. 505-514
    • Schwartz, M.1    Chen, J.2    Janda, M.3    Sullivan, M.4    Den Boon, J.5    Ahlquist, P.6
  • 39
    • 0030761264 scopus 로고    scopus 로고
    • Sequence-specific recognition of a subgenomic RNA promoter by a viral RNA polymerase
    • Siegel, R. W., S. Adkins, and C. C. Kao. 1997. Sequence-specific recognition of a subgenomic RNA promoter by a viral RNA polymerase. Proc. Natl. Acad. Sci. USA 94:11238-11243.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 11238-11243
    • Siegel, R.W.1    Adkins, S.2    Kao, C.C.3
  • 40
    • 0024669291 scopus 로고
    • A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae
    • Sikorski, R. S., and P. Hieter. 1989. A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. Genetics 122:19-27.
    • (1989) Genetics , vol.122 , pp. 19-27
    • Sikorski, R.S.1    Hieter, P.2
  • 41
    • 0347573269 scopus 로고    scopus 로고
    • Genomic plus-strand RNA synthesis by the brome mosaic virus (BMV) RNA replicase requires a sequence that is complementary to the binding site of the BMV-helicase-like protein
    • Sivakumaran, K., and C. C. Kao. 2000. Genomic plus-strand RNA synthesis by the brome mosaic virus (BMV) RNA replicase requires a sequence that is complementary to the binding site of the BMV-helicase-like protein. Mol. Plant Pathol. 1:337-346.
    • (2000) Mol. Plant Pathol. , vol.1 , pp. 337-346
    • Sivakumaran, K.1    Kao, C.C.2
  • 42
    • 0032975560 scopus 로고    scopus 로고
    • A brome mosaic virus intergenic RNA3 replication signal functions with viral replication protein 1a to dramatically stabilize RNA in vivo
    • Sullivan, M. L., and P. Ahlquist. 1999. A brome mosaic virus intergenic RNA3 replication signal functions with viral replication protein 1a to dramatically stabilize RNA in vivo. J. Virol. 73:2622-2632.
    • (1999) J. Virol. , vol.73 , pp. 2622-2632
    • Sullivan, M.L.1    Ahlquist, P.2
  • 43
    • 0029868595 scopus 로고    scopus 로고
    • Single-stranded DNA ligation by T4 RNA ligase for PCR cloning of 5′-noncoding fragments and coding sequence of a specific gene
    • Zhang, X. H., and V. L. Chiang. 1996. Single-stranded DNA ligation by T4 RNA ligase for PCR cloning of 5′-noncoding fragments and coding sequence of a specific gene. Nucleic Acids Res. 24:990-991.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 990-991
    • Zhang, X.H.1    Chiang, V.L.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.