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Volumn 148, Issue 1, 2003, Pages 165-175

Complete nucleotide sequence of spring beauty latent virus, a bromovirus infectious to Arabidopsis thaliana

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS; BASE SEQUENCE; BROMOVIRUS; GENES, VIRAL; MOLECULAR SEQUENCE DATA; OPEN READING FRAMES; PLANT DISEASES; PLANT VIRUSES; RNA, VIRAL; SEQUENCE ALIGNMENT;

EID: 0037218643     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-002-0909-0     Document Type: Article
Times cited : (16)

References (48)
  • 1
    • 0019351287 scopus 로고
    • Near identity of 3′ RNA secondary structure in bromoviruses and cucumber mosaic virus
    • Ahlquist P, Dasgupta R, Kaesberg P (1981) Near identity of 3′ RNA secondary structure in bromoviruses and cucumber mosaic virus. Cell 23: 183-189
    • (1981) Cell , vol.23 , pp. 183-189
    • Ahlquist, P.1    Dasgupta, R.2    Kaesberg, P.3
  • 2
    • 0019770556 scopus 로고
    • Complete nucleotide sequence of brome mosaic virus RNA3
    • Ahlquist P, Luckow V, Kaesberg P (1981) Complete nucleotide sequence of brome mosaic virus RNA3. J Mol Biol 153: 23-38
    • (1981) J Mol Biol , vol.153 , pp. 23-38
    • Ahlquist, P.1    Luckow, V.2    Kaesberg, P.3
  • 3
    • 0021367841 scopus 로고
    • Nucleotide sequence of the brome mosaic virus genome and its implications for viral replication
    • Ahlquist P, Dasgupta R, Kaesberg P (1984) Nucleotide sequence of the brome mosaic virus genome and its implications for viral replication. J Mol Biol 172: 369-383
    • (1984) J Mol Biol , vol.172 , pp. 369-383
    • Ahlquist, P.1    Dasgupta, R.2    Kaesberg, P.3
  • 5
    • 0024094687 scopus 로고
    • Infectious in vitro transcripts from cowpea chlorotic mottle virus cDNA clones and exchange of individual RNA components with brome mosaic virus
    • Allison RF, Janda M, Ahlquist P (1988) Infectious in vitro transcripts from cowpea chlorotic mottle virus cDNA clones and exchange of individual RNA components with brome mosaic virus. J Virol 62: 3581-3588
    • (1988) J Virol , vol.62 , pp. 3581-3588
    • Allison, R.F.1    Janda, M.2    Ahlquist, P.3
  • 6
    • 0024724209 scopus 로고
    • Sequence of cowpea chlorotic mottle virus RNAs 2 and 3 and evidence of a recombination event during bromovirus evolution
    • Allison RF, Janda M, Ahlquist P (1989) Sequence of cowpea chlorotic mottle virus RNAs 2 and 3 and evidence of a recombination event during bromovirus evolution. Virology 172: 321-330
    • (1989) Virology , vol.172 , pp. 321-330
    • Allison, R.F.1    Janda, M.2    Ahlquist, P.3
  • 7
    • 0032855296 scopus 로고    scopus 로고
    • Brome mosaic virus defective RNAs generated during infection of barley plants
    • Damayanti TA, Nagano H, Mise K, Furusawa I, Okuno T (1999) Brome mosaic virus defective RNAs generated during infection of barley plants. J Gen Virol 80: 2511-2518
    • (1999) J Gen Virol , vol.80 , pp. 2511-2518
    • Damayanti, T.A.1    Nagano, H.2    Mise, K.3    Furusawa, I.4    Okuno, T.5
  • 8
    • 0034671881 scopus 로고    scopus 로고
    • Big ideas from small plant
    • Dean C (2000) Big ideas from small plant. Science 290: 2071
    • (2000) Science , vol.290 , pp. 2071
    • Dean, C.1
  • 9
    • 0034649688 scopus 로고    scopus 로고
    • A. thaliana genome
    • Dennis C, Surridge C (2000) A. thaliana genome. Nature 408: 791-826
    • (2000) Nature , vol.408 , pp. 791-826
    • Dennis, C.1    Surridge, C.2
  • 10
    • 0034635982 scopus 로고    scopus 로고
    • Identification and characterization of a host protein required for efficient template selection in viral RNA replication
    • Diez J, Ishikawa M, Kaido M, Ahlquist P (2000) Identification and characterization of a host protein required for efficient template selection in viral RNA replication. Proc Natl Acad Sci USA 97: 3913-3918
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 3913-3918
    • Diez, J.1    Ishikawa, M.2    Kaido, M.3    Ahlquist, P.4
  • 11
    • 0028332808 scopus 로고
    • New overlapping gene encoded by the cucumber mosaic virus genome
    • Ding SW, Anderson BJ, Haase HR, Symons RH (1994) New overlapping gene encoded by the cucumber mosaic virus genome. Virology 198: 593-601
    • (1994) Virology , vol.198 , pp. 593-601
    • Ding, S.W.1    Anderson, B.J.2    Haase, H.R.3    Symons, R.H.4
  • 12
    • 0012291241 scopus 로고
    • Unique nucleotide differences in the conserved 3′ termini of brome mosaic virus RNAs maintained through their optimization of genome replication
    • Duggal R, Rao ALN, Hall TC (1992) Unique nucleotide differences in the conserved 3′ termini of brome mosaic virus RNAs maintained through their optimization of genome replication. Virology 173: 456-464
    • (1992) Virology , vol.173 , pp. 456-464
    • Duggal, R.1    Rao, A.L.N.2    Hall, T.C.3
  • 13
    • 0026351774 scopus 로고
    • The nucleotide sequence and genome organization of the RNA-1 segment in two bromoviruses: Broad bean mottle virus and cowpea chlorotic mottle virus
    • Dzianott AM, Bujarski JJ (1991) The nucleotide sequence and genome organization of the RNA-1 segment in two bromoviruses: Broad bean mottle virus and cowpea chlorotic mottle virus. Virology 185: 553-562
    • (1991) Virology , vol.185 , pp. 553-562
    • Dzianott, A.M.1    Bujarski, J.J.2
  • 14
    • 0035101725 scopus 로고    scopus 로고
    • Arabidopsis genome conference 2000: How a small weed changed the world
    • Eckardt NA (2001) Arabidopsis genome conference 2000: How a small weed changed the world. Plant Cell 13: 5-10
    • (2001) Plant Cell , vol.13 , pp. 5-10
    • Eckardt, N.A.1
  • 16
    • 0001939094 scopus 로고
    • RACE: Rapid amplification of cDNA ends
    • Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds). Academic Press, San Diego
    • Frohman MA (1990) RACE: Rapid amplification of cDNA ends. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR Protocols. Academic Press, San Diego, pp 28-38
    • (1990) PCR Protocols , pp. 28-38
    • Frohman, M.A.1
  • 17
    • 0000689325 scopus 로고
    • Effects of sulfur nutrition on expression of the soybean seed storage protein genes in transgenic petunia
    • Fujiwara T, Hirai MY, Chino M, Komeda Y, Naito S (1992) Effects of sulfur nutrition on expression of the soybean seed storage protein genes in transgenic petunia. Plant Physiol 99: 263-268
    • (1992) Plant Physiol , vol.99 , pp. 263-268
    • Fujiwara, T.1    Hirai, M.Y.2    Chino, M.3    Komeda, Y.4    Naito, S.5
  • 18
    • 0021016329 scopus 로고
    • A simple and very efficient method for generating cDNA libraries
    • Gubler U, Hoffman BJ (1983) A simple and very efficient method for generating cDNA libraries. Gene 25: 263-269
    • (1983) Gene , vol.25 , pp. 263-269
    • Gubler, U.1    Hoffman, B.J.2
  • 19
    • 0023273613 scopus 로고
    • High efficiency T7 polymerase synthesis of infectious RNA from cloned brome mosaic virus cDNA and effects of 5′ extensions on transcript infectivity
    • Janda M, French R, Ahlquist P (1987) High efficiency T7 polymerase synthesis of infectious RNA from cloned brome mosaic virus cDNA and effects of 5′3 extensions on transcript infectivity. Virology 158: 259-262
    • (1987) Virology , vol.158 , pp. 259-262
    • Janda, M.1    French, R.2    Ahlquist, P.3
  • 20
    • 0024840821 scopus 로고
    • Defined mutations in a small region of the brome mosaic virus 2a gene cause diverse temperature-sensitive RNA replication phenotypes
    • Kroner P, Richards D, Traynor P, Ahlquist P (1989) Defined mutations in a small region of the brome mosaic virus 2a gene cause diverse temperature-sensitive RNA replication phenotypes. J Virol 63: 5302-5309
    • (1989) J Virol , vol.63 , pp. 5302-5309
    • Kroner, P.1    Richards, D.2    Traynor, P.3    Ahlquist, P.4
  • 21
    • 0025251611 scopus 로고
    • Analysis of the role of brome mosaic virus 1a protein domains in RNA replication, using linker insertion mutagenesis
    • Kroner PA, Young BM, Ahlquist P (1990) Analysis of the role of brome mosaic virus 1a protein domains in RNA replication, using linker insertion mutagenesis. J Virol 64: 6110-6120
    • (1990) J Virol , vol.64 , pp. 6110-6120
    • Kroner, P.A.1    Young, B.M.2    Ahlquist, P.3
  • 22
    • 0002248750 scopus 로고
    • RNA-based viruses
    • Gurr SJ, McPherson MJ, Bowles DJ (eds), Oxford University Press, New York
    • Kroner P, Ahlquist P (1992) RNA-based viruses. In: Gurr SJ, McPherson MJ, Bowles DJ (eds) Molecular Plant Pathology; A Practical Approach, vol. 1. Oxford University Press, New York, pp 23-34
    • (1992) Molecular Plant Pathology; A Practical Approach , vol.1 , pp. 23-34
    • Kroner, P.1    Ahlquist, P.2
  • 24
    • 0014949207 scopus 로고
    • Cleavage of structural proteins during the assembly of the head of bacteriophage T4
    • Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227: 680-685
    • (1970) Nature , vol.227 , pp. 680-685
    • Laemmli, U.K.1
  • 25
  • 26
    • 0034746038 scopus 로고    scopus 로고
    • Mutation of host Δ9 fatty acid desaturase inhibits brome mosaic virus RNA replication between template recognition and RNA synthesis
    • Lee WM, Ishikawa M, Ahlquist P (2001) Mutation of host Δ9 fatty acid desaturase inhibits brome mosaic virus RNA replication between template recognition and RNA synthesis. J Virol 75: 2097-2106
    • (2001) J Virol , vol.75 , pp. 2097-2106
    • Lee, W.M.1    Ishikawa, M.2    Ahlquist, P.3
  • 27
    • 0027535328 scopus 로고
    • Bromovirus movement protein genes play a crucial role in host specificity
    • Mise K, Allison RF, Janda M, Ahlquist P (1993) Bromovirus movement protein genes play a crucial role in host specificity. J Virol 67: 2815-2823
    • (1993) J Virol , vol.67 , pp. 2815-2823
    • Mise, K.1    Allison, R.F.2    Janda, M.3    Ahlquist, P.4
  • 28
    • 0028834095 scopus 로고
    • Host-specificity restriction by bromovirus cell-to-cell movement protein occurs after initial cell-to-cell spread of infection in nonhost plants
    • Mise K, Ahlquist P (1995) Host-specificity restriction by bromovirus cell-to-cell movement protein occurs after initial cell-to-cell spread of infection in nonhost plants. Virology 206: 276-286
    • (1995) Virology , vol.206 , pp. 276-286
    • Mise, K.1    Ahlquist, P.2
  • 29
    • 0034700120 scopus 로고    scopus 로고
    • A mutant allele of essential, general translation initiation factor DED1 selectively inhibits translation of a viral mRNA
    • Noueiry AO, Chen J, Ahlquist P (2000) A mutant allele of essential, general translation initiation factor DED1 selectively inhibits translation of a viral mRNA. Proc Natl Acad Sci USA 97: 12985-12990
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 12985-12990
    • Noueiry, A.O.1    Chen, J.2    Ahlquist, P.3
  • 30
    • 0035041545 scopus 로고    scopus 로고
    • The C terminus of brome mosaic virus coat protein controls viral cell-to-cell and long-distance movement
    • Okinaka Y, Mise K, Suzuki E, Okuno T, Furusawa I (2001) The C terminus of brome mosaic virus coat protein controls viral cell-to-cell and long-distance movement. J Virol 75: 5385-5390
    • (2001) J Virol , vol.75 , pp. 5385-5390
    • Okinaka, Y.1    Mise, K.2    Suzuki, E.3    Okuno, T.4    Furusawa, I.5
  • 31
    • 0017796673 scopus 로고
    • Modes of infection of barley protoplasts with brome mosaic virus
    • Okuno T, Furusawa I (1978) Modes of infection of barley protoplasts with brome mosaic virus. J Gen Virol 38: 409-418
    • (1978) J Gen Virol , vol.38 , pp. 409-418
    • Okuno, T.1    Furusawa, I.2
  • 32
    • 0026575812 scopus 로고
    • Substantial portions of the 5′ and intercistronic noncoding regions of cowpea chlorotic mottle virus RNA3 are dispensable for systemic infection but influence viral competitiveness and infection pathology
    • Pacha RF, Ahlquist P (1992) Substantial portions of the 5′ and intercistronic noncoding regions of cowpea chlorotic mottle virus RNA3 are dispensable for systemic infection but influence viral competitiveness and infection pathology. Virology 187: 298-307
    • (1992) Virology , vol.187 , pp. 298-307
    • Pacha, R.F.1    Ahlquist, P.2
  • 33
    • 0028214674 scopus 로고
    • Infectious transcripts from PCR-amplified broad bean mottle bromovirus cDNA clones and variable nature of leader regions in RNA3 segment
    • Pogany J, Hung Q, Romero J, Nagy PD, Bujarski JJ (1994) Infectious transcripts from PCR-amplified broad bean mottle bromovirus cDNA clones and variable nature of leader regions in RNA3 segment. J Gen Virol 75: 693-699
    • (1994) J Gen Virol , vol.75 , pp. 693-699
    • Pogany, J.1    Hung, Q.2    Romero, J.3    Nagy, P.D.4    Bujarski, J.J.5
  • 34
    • 0012312567 scopus 로고
    • Point mutations in the ICR2 motif of brome mosaic virus RNAs debilitate in the (+)-strand replication
    • Pogue GP, Marsh LE, Hall TC (1990) Point mutations in the ICR2 motif of brome mosaic virus RNAs debilitate in the (+)-strand replication. Virology 188: 742-753
    • (1990) Virology , vol.188 , pp. 742-753
    • Pogue, G.P.1    Marsh, L.E.2    Hall, T.C.3
  • 35
    • 0026500564 scopus 로고
    • The requirement for a 5′ stem-structure in brome mosaic virus replication supports a new model for viral positive-strand RNA initiation
    • Pogue GP, Hall TC (1992) The requirement for a 5′ stem-structure in brome mosaic virus replication supports a new model for viral positive-strand RNA initiation. J Virol 66: 674-684
    • (1992) J Virol , vol.66 , pp. 674-684
    • Pogue, G.P.1    Hall, T.C.2
  • 36
    • 0027497972 scopus 로고
    • Characterization of a host protein associated with brome mosaic virus RNA-dependent RNA polymerase
    • Quadt R, Kao CC, Browing KS, Hershberger RP, Ahlquist P (1993) Characterization of a host protein associated with brome mosaic virus RNA-dependent RNA polymerase. Proc Natl Acad Sci USA 90: 1498-1502
    • (1993) Proc Natl Acad Sci USA , vol.90 , pp. 1498-1502
    • Quadt, R.1    Kao, C.C.2    Browing, K.S.3    Hershberger, R.P.4    Ahlquist, P.5
  • 37
    • 0026545586 scopus 로고
    • The nucleotide sequence and genome organization of the RNA2 and RNA3 segments in broad bean mottle virus
    • Romero J, Dzianott AM, Bujarski JJ (1992) The nucleotide sequence and genome organization of the RNA2 and RNA3 segments in broad bean mottle virus. Virology 187: 671-681
    • (1992) Virology , vol.187 , pp. 671-681
    • Romero, J.1    Dzianott, A.M.2    Bujarski, J.J.3
  • 39
    • 0024759051 scopus 로고
    • Effects of deletions in the N-terminal basic arm of brome mosaic virus coat protein on RNA packaging and systemic infection
    • Sacher R, Ahlquist P (1989) Effects of deletions in the N-terminal basic arm of brome mosaic virus coat protein on RNA packaging and systemic infection. J Virol 63: 4545-4552
    • (1989) J Virol , vol.63 , pp. 4545-4552
    • Sacher, R.1    Ahlquist, P.2
  • 40
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M (1987) The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 41
    • 0035916012 scopus 로고    scopus 로고
    • Site-specific single amino acid changes to Lys or Arg in the central region of the movement protein of a hybrid bromovirus are required for adaptation to a nonhost
    • Sasaki N, Fujita Y, Mise K, Furusawa I (2001) Site-specific single amino acid changes to Lys or Arg in the central region of the movement protein of a hybrid bromovirus are required for adaptation to a nonhost. Virology 279: 47-57
    • (2001) Virology , vol.279 , pp. 47-57
    • Sasaki, N.1    Fujita, Y.2    Mise, K.3    Furusawa, I.4
  • 42
    • 0030589564 scopus 로고    scopus 로고
    • Molecular study on bromovirus capsid protein; I Characterization of cell-to-cell movement-defective RNA3 variants of brome mosaic virus
    • Schmitz I, Rao ALN (1996) Molecular study on bromovirus capsid protein; I. Characterization of cell-to-cell movement-defective RNA3 variants of brome mosaic virus. Virology 226: 281-293
    • (1996) Virology , vol.226 , pp. 281-293
    • Schmitz, I.1    Rao, A.L.N.2
  • 43
    • 0032975560 scopus 로고    scopus 로고
    • A brome mosaic virus intergenic RNA3 replication signal functions with viral replication protein 1a to dramatically stabilize RNA in vivo
    • Sullivan ML, Ahlquist P (1999) A brome mosaic virus intergenic RNA3 replication signal functions with viral replication protein 1a to dramatically stabilize RNA in vivo. J Virol 73: 2622-2632
    • (1999) J Virol , vol.73 , pp. 2622-2632
    • Sullivan, M.L.1    Ahlquist, P.2
  • 44
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 45
    • 0012246539 scopus 로고
    • Spring beauty latent bromovirus: A new member of the bromovirus group
    • Valverde RA (1985) Spring beauty latent bromovirus: A new member of the bromovirus group. Phytopathology 75: 395-398
    • (1985) Phytopathology , vol.75 , pp. 395-398
    • Valverde, R.A.1
  • 46
    • 0012291245 scopus 로고
    • Further examination of the RNA and coat protein of spring beauty latent virus
    • Valverde RA, Glascock CB (1991) Further examination of the RNA and coat protein of spring beauty latent virus. Phytopathology 81: 401-404
    • (1991) Phytopathology , vol.81 , pp. 401-404
    • Valverde, R.A.1    Glascock, C.B.2
  • 47
    • 0028919370 scopus 로고
    • Interspecific reassortment of genomic segments in the evolution of cucumoviruses
    • White PS, Morales F, Roossinck MJ (1995) Interspecific reassortment of genomic segments in the evolution of cucumoviruses. Virology 207: 334-337
    • (1995) Virology , vol.207 , pp. 334-337
    • White, P.S.1    Morales, F.2    Roossinck, M.J.3
  • 48
    • 0031907645 scopus 로고    scopus 로고
    • Isolation of an Arabidopsis thaliana mutant in which accumulation of cucumber mosaic virus coat protein is delayed
    • Yoshii M, Yoshioka N, Ishikawa M, Naito S (1998) Isolation of an Arabidopsis thaliana mutant in which accumulation of cucumber mosaic virus coat protein is delayed. Plant J 13: 211-219
    • (1998) Plant J , vol.13 , pp. 211-219
    • Yoshii, M.1    Yoshioka, N.2    Ishikawa, M.3    Naito, S.4


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