Pathway of information transmission from heme to protein upon ligand binding/dissociation in myoglobin revealed by UV resonance raman spectroscopy

Journal of Biological Chemistry

Volumn 281, Issue 34, 2006, Pages 24637-24646

  Gao, Ying ^a   El Mashtoly, Samir F ^b   Pal, Biswajit ^b   Hayashi, Takashi ^c   Harada, Katsuyoshi ^c   Kitagawa, Teizo ^a,b  

^a GRADUATE UNIVERSITY FOR ADVANCED STUDIES   (Japan)

^b OKAZAKI INSTITUTE FOR INTEGRATIVE BIOSCIENCE   (Japan)

^c OSAKA UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

CHEMICAL SENSORS; DATA ACQUISITION; HYDROGEN BONDS; MATHEMATICAL MODELS; RAMAN SPECTROSCOPY; ULTRAVIOLET RADIATION;

INFORMATION TRANSMISSION; MYOGLOBIN; UV RESONANCE RAMAN (UVRR) SPECTROSCOPY;

PROTEINS;

CARBON MONOXIDE; GLOBIN; HEME; HISTIDINE; LIGAND; MYOGLOBIN; NITRIC OXIDE; OXYGEN; PROPIONIC ACID DERIVATIVE; TRYPTOPHAN;

ALPHA HELIX; ARTICLE; CONTROLLED STUDY; COVALENT BOND; HYDROGEN BOND; LIGAND BINDING; NONHUMAN; PRIORITY JOURNAL; PROTEIN CONFORMATION; PROTEIN TRANSPORT; RAMAN SPECTROMETRY; WHALE;

ANIMALS; HEME; HORSES; HYDROGEN BONDING; MODELS, MOLECULAR; MOLECULAR CONFORMATION; MYOGLOBIN; SPECTRUM ANALYSIS, RAMAN; ULTRAVIOLET RAYS;

PHYSETER CATODON;

EID: 33748312196     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M603198200     Document Type: Article

References (36)

1. Perutz, M. F., Fermi, G., Luisi, B., Shaanan, B., and Liddington, R. C. (1987) Acc. Chem. Res. 20, 309-321
2. Rodgers, K. R. (1999) Curr. Opin. Chem. Biol. 3, 158-167
3. Aono, S., and Nakajima, H. (1999) Coord. Chem. Rev. 190-192, 267-282
4. Chan, M. K. (2000) Nat. Struct. Biol. 7, 822-824
5. Takano, T. (1977) J. Mol. Biol. 110, 569-584
6. Kachalova, G. S., Popov, A. N., and Bartunik, H. D. (1999) Science 284, 473-476
7. Brucker, E. A., Olson, J. S., Ikeda-Saito, M., and Phillips, G. N., Jr. (1998) Proteins. 30, 352-356
8. Vojtechovsky, J., Chu, K., Berendzen, J., Sweet, R. M., and Schlichting, I. (1999) Biophys. J. 77, 2153-2164
9. Haruta, N., Aki, M., Ozaki, S., Watanabe, Y., and Kitagawa, T. (2001) Biochemistry 40, 6956-6963
10. Mizutani, Y., and Kitagawa, T. (2001) Chem. Rec. 1, 258-275
11. Franzen, S., Bohn, B., Poyart, C., DePillis, G., Boxer, S. G., and Martin, J.-L. (1995) J. Biol. Chem. 270, 1718-1720
12. Springer, B. A., Egeberg, K. D., Sligar, S. G., Rohlfs, R. J., Mathews, A. J., and Olson, J. S. (1989) J. Biol. Chem. 264, 3057-3060
13. Barrick, D. (1994) Biochemistry 33, 6546-6554
14. Hayashi, T., Nakagawa, T., Harada, K., Matsuo, T., Hitomi, Y., and Hisaeda, Y. (2004) Chem. Lett. 33, 1512-1513
15. Hauksson, J. B., La Mar, G. N., Pandey, R. K., Rezzano, I. N., and Smith, K. M. (1990) J. Am. Chem. Soc. 112, 6198-6205
16. Aki, M., Ogura, T., Shinzawa-Itoh, K., Yoshikawa, S., and Kitagawa, T. (2000) J. Phys. Chem. B 104, 10765-10774
17. Harada, I., and Takeuchi, H. (1986) in Spectroscopy of Biological Systems, Advances in Spectroscopy (Clark, R. J. H., and Hester, R. E., eds) Vol. 13, pp. 113-175, John Wiley & Sons, Inc., New York
18. Takeuchi, H. (2003) Biopolymers 72, 305-317
19. Rodgers, K. R., Su, C., Subramaniam, S., and Spiro, T. G. (1992) J. Am. Chem. Soc. 114, 3697-3709
20. Austin, J. C., Jordan, T., and Spiro, T. G. (1993) in Biomolecular Spectroscopy, Part A (Clark, R. J. H., and Hester, R. E., eds), Vol. 20, pp. 55-127, John Wiley & Sons, Inc., New York
21. Guex, N., and Peitsch, M. C. (1997) Electrophoresis 18, 2714-2723
22. Kilmartin, J. V., Imai, K., Jones, R. T., Farqui, A. R., Fogg, J., and Baldwin, J. M. (1978) Biochim. Biophys. Acta 534, 15-25
23. Fung, L. W.-M., and Ho, C. (1975) Biochemistry 14, 2526-2535
24. Bashfold, D., Chothia, C., and Lesk, A. M. (1987) J. Mol. Biol. 196, 199-216
25. Shiro, Y., Iizuka, T., Marubayashi, K., Ogura, T., Kitagawa, T., Balasubramanian, S., and Boxer, S. G. (1994) Biochemistry 33, 14986-14992
26. Smerdon, S. J., Krzywda, S., and Wilkinson, A. J. (1993) Biochemistry 32, 5132-5138
27. Peterson, E. S., Friedman, J. M., Chien, E. Y. T., and Sligar, S. G. (1998) Biochemistry 37, 12301-12319
28. Tuckerman, J. R., Gonzalez, G., Dioum, E. M., and Gilles-Gonzalez, M.-A. (2002) Biochemistry 41, 6170-6177
29. Dunham, C. M., Dioum, E. M., Tuckerman, J. R., Gonzalez, G., Scott, W. G., and Gilles-Gonzalez, M.-A. (2003) Biochemistry 42, 7701-7708
30. Hao, B., Isaza, C., Arndt, J., Soltis, M., and Chan, M. K. (2002) Biochemistry 41, 12952-12958
31. Park, H., Suquet, C., Satterlee, J. D., and Kang, C. (2004) Biochemistry 43, 2738-2746
32. Cerda-Colon, J. F., Silfa, E., and Lopez-Garriga, J. (1998) J. Am. Chem. Soc. 120, 9312-9317
33. Sato, A., Sasakura, Y., Sugiyama, S., Sagami, I., Shimizu, T., Mizutani, Y., and Kitagawa, T. (2002) J. Biol. Chem. 277, 32650-32658
34. Springer, B. A., Sligar, S. G., Olson, J. S., and Phillips, G. N., Jr. (1994) Chem. Rev. 94, 699-714
35. Spiro, T. G., and Kozlowski, P. M. (2001) Acc. Chem. Res. 34, 137-144
36. Uchida, T., and Kitagawa, T. (2005) Acc. Chem. Res. 38, 662-670