Manganese oxides: Parallels between abiotic and biotic structures

Journal of the American Chemical Society

Volumn 128, Issue 34, 2006, Pages 11188-11198

  Saratovsky, Ian ^a   Wightman, Peter G ^a   Pastén, Pablo A ^b   Gaillard, Jean François ^a   Poeppelmeier, Kenneth R ^a  

^a NORTHWESTERN UNIVERSITY   (United States)

^b PONTIFICIA UNIVERSIDAD CATÓLICA DE CHILE   (Chile)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA; MICROORGANISMS; OXIDATION; PRECIPITATION (CHEMICAL); TRANSMISSION ELECTRON MICROSCOPY; X RAY DIFFRACTION;

AQUATIC SYSTEMS; BIOTIC STRUCTURES; CATION VACANCIES; MULTIPLE-SCATTERING ANALYSIS;

MANGANESE COMPOUNDS;

MANGANESE OXIDE;

AQUATIC ENVIRONMENT; ARTICLE; BIOGENESIS; BIOTIC LIGAND MODEL; CHEMICAL ANALYSIS; OXIDATION; PARTICLE SIZE; QUANTITATIVE ANALYSIS; STRUCTURE ANALYSIS; TRANSMISSION ELECTRON MICROSCOPY; X RAY DIFFRACTION; X RAY SPECTROMETRY;

MANGANESE COMPOUNDS; MICROSCOPY, ELECTRON, TRANSMISSION; MOLECULAR STRUCTURE; OXIDES; SPECTRUM ANALYSIS; X-RAY DIFFRACTION;

EID: 33748030134     PISSN: 00027863     EISSN: None     Source Type: Journal    
DOI: 10.1021/ja062097g     Document Type: Article

References (105)

1. Whittingham, M. S.; Zavalij, P. Y. Solid State Ionics 2000, 131, 109-115.
2. Whittingham, M. S.; Zavalij, P.; Zhang, F.; Sharma, P.; Moore, G. In The Stabilization of Layered Manganese Oxides for Use in Eechargeable Lithium Batteries; Materials Research Society Symposium Proceedings; Materials Research Society: Warrendale, PA, 2000; pp 77-82.
3. Whittingham, M. S.; Zavalij, P.; Ngala, K. In Pillared Oxides of Manganese and Vanadium for Lithium Batteries-Geometric and Electronic Factors; Proceedings; Electrochemical Society: Pennington, NJ, 2001; pp 8-17.
4. Whittingham, M. S. Chem. Rev. 2004, 104, 4271-4301.
5. Kim, S. H.; Kim, S. J.; Oh, S. M. Chem. Mater. 1999, 11, 557-563.
6. Wang, Y.; Ohtsuka, Y. Top. Catal. 2003, 22, 71-75.
7. Alvarez-Galvan, M. C.; de la Pena O'Shea, V. A.; Fierro, J. L. G.; Arias, P. L. Catal. Commun. 2003, 4, 223-228.
8. Brueckner, A.; Bentrup, U.; Radnik, J.; Richter, M.; Fricke, R. Stud. Surf. Sci. Catal. 2003, 145, 463-464.
9. Chen, A.; Xu, H.; Yue, Y.; Hua, W.; Shen, W.; Gao, Z. J. Mol. Catal. A: Chem. 2003, 203, 299-306.
10. Jokic, A.; Frenkel, A. I.; Vairavamurthy, M. A.; Huang, P. M. Geophys. Res. Lett. 2001, 28, 3899-3902.
11. Liu, J.; Cai, J.; Son, Y. C.; Gao, Q. M.; Suib, S. L.; Aindow, M. J. Phys. Chem. B 2002, 106, 9761-9768.
12. Giovanoli, R.; Stahli, E.; Feitknecht, W. Helv. Chim. Acta 1970, 53, 209.
13. Giovanoli, R.; Stahli, E.; Feitknecht, W. Helv. Chim. Acta 1970, 53, 453.
14. Manceau, A.; Combes, J. M. Phys. Chem. Miner. 1988, 15, 283-295.
15. Manceau, A.; Gorshkov, A. I.; Drits, V. A. Am. Mineral. 1992, 77, 1144-1157.
16. Manceau, A.; Gorshkov, A. I.; Drits, V. A. Am. Mineral. 1992, 77, 1133-1143.
17. Gao, Q.; Giraldo, O.; Tong, W.; Suib, S. L. Chem. Mater. 2001, 13, 778-786.
18. Means, J. L.; Crerar, D. A.; Borcsik, M. P.; Duguid, J. O. Geochim. Cosmochim. Acta 1978, 42, 1763-1773.
19. Matocha, C. J.; Elzinga, E. J.; Sparks, D. L. Environ. Sci. Technol. 2001, 35, 2967-2972.
20. Toner, B.; Manceau, A.; Marcus, M. A.; Millet, D. B.; Sposito, G. Environ. Sci. Technol. 2005, 39, 8288-8294.
21. Lanson, B.; Drits, V. A.; Gaillot, A. C.; Silvester, E.; Plancon, A.; Manceau, A. Am. Mineral. 2002, 87, 1631-1645.
22. Drits, V. A.; Lanson, B.; Bougerol-Chaillout, C.; Gorshkov, A. I.; Manceau, A. Am. Mineral. 2002, 87, 1646-1661.
23. Manceau, A.; Lanson, B.; Drits, V. A. Geochim. Cosmochim. Acta 2002, 66, 2639-2663.
24. Manceau, A.; Drits, V. A.; Silvester, E.; Bartoli, C.; Lanson, B. Am. Mineral. 1997, 82, 1150-1175.
25. Taillefert, M.; MacGregor, B. J.; Gaillard, J. F.; Lienemann, C. P.; Perret, D.; Stahl, D. A. Environ. Sci. Technol. 2002, 36, 468-476.
26. Dyer, A.; Pillinger, M.; Newton, J.; Harjula, R.; Moeller, T.; Amin, S. Chem. Mater. 2000, 12, 3798-3804.
27. Al-Attar, L.; Dyer, A. J. Mater. Chem. 2002, 12, 1381-1386.
28. Katsoyiannis, I. A.; Zouboulis, A. I.; Jekel, M. Ind. Eng. Chem. Res. 2004, 43, 486-493.
29. Lienemann, C. P.; Taillefert, M.; Perret, D.; Gaillard, J. F. Geochim. Cosmochim. Acta 1997, 61, 1437-1446.
30. Webb, S. M.; Fuller, C. C.; Tebo, B. M.; Bargar, J. R. Environ. Sci. Technol. 2006, 40, 771-777.
31. Post, J. E. Proc. Natl. Acad. Sci. U.S.A. 1999, 96, 3447-3454.
32. Tebo, B. M.; He, L. M. Microbially mediated oxidative precipitation reactions. In Mineral-Water Interfacial Reactions, 1st ed.; Grundl, T., Sparks, D. L., Eds.; American Chemical Society: Washington, DC, 1998; Vol. 715, pp 393-414.
33. Tebo, B. M.; Bargar, J. R.; Clement, B. G.; Dick, G. J.; Murray, K. J.; Parker, D.; Verity, R.; Webb, S. M. Annu. Rev. Earth Planet. Sci. 2004, 32, 287-328.
34. Tebo, B. M.; Ghiorse, W. C.; Van Waasbergen, L. G.; Siering, P. L.; Caspi, R. Rev. Mineral. 1997, 35, 225-266.
35. Frost, A. A. J. Am. Chem. Soc. 1951, 73, 2680-2682.
36. Morgan, J. J. Geochim. Cosmochim. Acta 2004, 69, 35-48.
37. Klewicki, J. K.; Morgan, J. J. Environ. Sci. Technol. 1998, 32, 2916-2922.
38. Stumm, W.; Morgan, J. J. Aquatic Chemistry: Chemical Equilibria and Rates in Natural Waters, 3rd ed.; Wiley: New York, 1996; p 1022.
39. Luther III, G. W. In Aquatic Chemical Kinetics: Reaction Rates of Processes in Natural Waters; Stumm, W., Metcalf, R. L., Eds.; Wiley-Interscience: New York, 1990; pp 173-198.
40. Emerson, S.; Kalhorn, S.; Jacobs, L.; Tebo, B. M.; Nealson, K. H.; Rosson, R. A. Geochim. Cosmochim. Acta 1982, 46, 1073-1079.
41. Webb, S. M.; Tebo, B. M.; Bargar, J. R. Am. Mineral. 2005, 90, 1342-1357.
42. Bargar, J. R.; Tebo, B. M.; Bergmann, U.; Webb, S. M.; Glatzel, P.; Chiu, V. Q.; Villalobos, M. Am. Mineral. 2005, 90, 143-154.
43. Villalobos, M.; Toner, B.; Bargar, J.; Sposito, G. Geochim. Cosmochim. Acta 2003, 67, 2649-2662.
44. Kim, H.-S.; Pasten, P. A.; Gaillard, J.-F.; Stair, P. C. J. Am. Chem. Soc. 2003, 125, 14284-14285.
45. Kim, H. S.; Stair, P. C. J. Phys. Chem. B 2004, 108, 17019-17026.
46. Juergensen, A.; Widmeyer, J. R.; Gordon, R. A.; Bendell-Young, L. I.; Moore, M. M.; Crozier, E. D. Am. Mineral. 2004, 89, 1110-1118.
47. Fritsch, S.; Post, J. E.; Suib, S. L.; Navrotsky, A. Chem. Mater. 1998, 10, 474-479.
48. Yang, D. S.; Wang, M. K. Chem. Mater. 2001, 13, 2589-2594.
49. Emerson, D. Ultrastructural organization, chemical composition, and manganese-oxidizing properties of the sheath of Leptothrix discophora SP-6. Ph.D. Dissertation, Cornell University, Ithaca, NY, 1989.
50. Emerson, D.; Ghiorse, W. C. Appl. Environ. Microbiol. 1992, 58, 4001-4010.
51. Pasten, P. A. Structure and formation kinetics of manganese oxides by Leptothrix discophora SP-6. Ph.D. dissertation, Northwestern University, Evanston, IL, 2002.
52. McKenzie, R. M. Mineral. Mag. 1971, 38, 493-302.
53. McMurdie, H. F. Trans. Electrochem. Soc. 1944, 86, 12 pp.
54. McMurdie, H. F.; Golovato, E. J. Res. Natl. Bur. Stand. (U.S.) 1948, 41, 589-600.
55. Malinger, K. A.; Laubernds, K.; Son, Y.-C.; Suib, S. L. Chem. Mater. 2004, 16, 4296-4303.
56. Ansell, G. B.; Horowitz, H. S.; Longo, J. M. Acta Crystallogr., Sect. A: Found Crystallogr. 1978, 34, S157-S157.
57. Poeppelmeier, K. R.; Ansell, G. B.; Modrick, M. A.; Longo, J. M.; Horowitz, H. S. Acta Crystallogr., Sect. B: Struct. Sci. 1982, 38, 1795-1797.
58. Aronson, B. J.; Kinser, A. K.; Passerini, S.; Smyrl, W. H.; Stein, A. Chem. Mater. 1999, 11, 949-957.
59. Hayat, M. A. Micron Microsc. Acta 1986, 17, 115-135.
60. Frosch, D.; Westphal, C. Electron Microsc. Rev. 1989, 2, 231-255.
61. Droppo, I. G.; Flannigan, D. T.; Leppard, G. G.; Jaskot, C.; Liss, S. N. Appl. Environ. Microbiol. 1996, 62, 3508-3515.
62. Conradson, S. D.; Al Mahamid, I.; Clark, D. L.; Hess, N. J.; Hudson, E. A.; Neu, M. P.; Palmer, P. D.; Runde, W. H.; Tait, C. D. Polyhedron 1998, 17, 599-602.
63. Stern, E. A.; Elam, W. T.; Bunker, B. A.; Lu, K. Q.; Heald, S. M. Nuclear Instrum. Methods Phys. Res. 1982, 195, 345-346.
64. Newville, M.; Livins, P.; Yacoby, Y.; Rehr, J. J.; Stern, E. A. Jpn. J. Appl. Phys., Part I 1993, 32, 125-127.
65. Ravel, B.; Newville, M.; Cross, J. O.; Bouldin, C. E. Physica B 1995, 209, 145-147.
66. Webb, S. M. Phys. Ser. 2005, T115, 1011-1014.
67. Ravel, B.; Newville, M. J. Synchrotron Radiat. 2005, 12, 537-541.
68. Newville, M. J. Synchrotron Radiat. 2001, 8, 322-324.
69. Newville, M. J. Synchrotron Radiat. 2001, 8, 96-100.
70. Rehr, J. J.; Zabinsky, S. I. FEFF5: An ab Initio Multiple Scattering XAFS Code; Report, Department of Physics: University of Washington: Seattle, WA, 1992; 5 pp.
71. Brock, S. L.; Sanabria, M.; Nair, J.; Suib, S. L.; Ressler, T. J. Phys. Chem. B 2001, 105, 5404-5410.
72. Gaillard, J. F.; Webb, S. M.; Quintana, J. P. G. J. Synchrotron Radiat. 2001, 8, 928-930.
73. Caillot, A.-C.; Flot, D.; Drits, V. A.; Manceau, A.; Burghammer, M.; Lanson, B. Chem. Mater. 2003, 15, 4666-4678.
74. Yang, X. J.; Makita, Y.; Liu, Z. H.; Sakane, K.; Ooi, K. Chem. Mater. 2004, 16, 5581-5588.
75. Webb, S. M.; Dick, G. J.; Bargar, J. R.; Tebo, B. M. Proc. Natl. Acad. Sci. U.S.A. 2005, 102, 5558-5563.
76. Koningsberger, D. C.; Prins, R. X-ray Absorption: Principles, Applications, Techniques of EXAFS, SEXAFS, and XANES; Wiley: New York, 1988; pp XII, 673.
77. Poeppelmeier, K. R.; Leonowicz, M. E.; Scanlon, J. C.; Longo, J. M.; Yelon, W. B. J. Solid State Chem. 1982, 45, 71-79.
78. Baur, W. H. Acta Crystallogr., Sect. B: Struct. Sci. 1976, 32, 2200-2204.
79. Suib, S. L. Chem. Rev. 1993, 93, 803-826.
80. Topfer, J.; Trari, M.; Gravereau, P.; Chaminade, J. P.; Doumerc, J. P. Z. Kristallogr. 1995, 210, 184-187.
81. Post, J. E.; Appleman, D. E. Am. Mineral. 1988, 73, 1401-1404.
82. Lanson, B.; Drits, V. A.; Feng, Q.; Manceau, A. Am. Mineral. 2002, 87, 1662-1671.
83. Oswald, H. R.; Reitknecht, W.; Wampetich, M. J. Nature 1965, 207, 72.
84. Oswald, H. R.; Wampetich, M. J. Helv. Chim. Acta 1967, 50, 2023-2034.
85. Riou, A.; Lecerf, A. Acta Crystallogr., Sect. B: Struct. Sci. 1977, 33, 1896-1900.
86. Liao, J. H.; Guyomard, D.; Piffard, Y.; Tournoux, M. Acta Crystallogr., Sect. C: Cryst. Struct. Commun. 1996, 52, 284-286.
87. Gaillot, A. C.; Drits, V. A.; Plancon, A.; Lanson, B. Chem. Mater. 2004, 16, 1890-1905.
88. Post, J. E.; Veblen, D. R. Am. Mineral. 1990, 75, 477-489.
89. Drits, V. A.; Silvester, E.; Gorshkov, A. I.; Manceau, A. Am. Mineral. 1997, 82, 946-961.
90. Lanson, B.; Drits, V. A.; Silvester, E.; Manceau, A. Am. Mineral. 2000, 85, 826-838.
91. Yang, X.; Tang, W.; Feng, Q.; Ooi, K. Cryst. Growth Des. 2003, 3, 409-415.
92. Post, J. E.; Bish, D. L. Am. Mineral. 1988, 73, 861-869.
93. Haro-Poniatowski, E.; Julien, C.; Pecquenard, B.; Livage, J.; Camacho-Lopez, M. A. J. Mater. Res. 1998, 13, 1033-1037.
94. Brock, S. L.; Sanabria, M.; Suib, S. L.; Urban, V.; Thiyagarajan, P.; Potter, D. I. J. Phys. Chem. B 1999, 103, 7416-7428.
95. Luo, J.; Zhang, Q. H.; Huang, A. M.; Giraldo, O.; Suib, S. L. Inorg. Chem. 1999, 38, 6106-6113.
96. Yang, A.; Harris, V. G.; Calvin, S.; Zuo, X.; Victoria, C. IEEE Trans. Magn. 2004, 40, 2802-2804.
97. Calvin, S.; Carpenter, E. E.; Harris, V. G.; Morrison, S. A. Appl. Phys. Lett. 2002, 81, 3828-3830.
98. Nealson, K. H.; Tebo, B. Origins Life 1980, 10, 117-126.
99. Brouwers, G.-J.; De Vrind, J. P. M.; Corstjens, P. L. A. M.; Cornelis, P.; Baysse, C.; De Vrind-De Jong, E. W. Appl. Environ. Microbiol. 1999, 65, 1762-1768.
100. Brouwers, G. J.; Corstjens, P. L. A. M.; De Vrind, J. P. M.; Verkamman, A.; De Kuyper, M.; De Vrind-De Jong, E. W. Geomicrobiol. J. 2000, 17, 25-33.
101. Brouwers, G. J.; Vijgenboom, E.; Corstjens, P. L. A. M.; De Vrind, J. P. M.; De Vrind-De Jong, E. W. Geomicrobiol. J. 2000, 17, 1-24.
102. Francis, C. A.; Tebo, B. M. Appl. Environ. Microbiol. 2001, 67, 4272-4278.
103. Francis, C. A.; Casciotti, K. L.; Tebo, B. M. Arch. Microbiol. 2002, 178, 450-456.
104. Francis, C. A.; Tebo, B. M. Appl. Environ. Microbiol. 2002, 68, 874-880.
105. Miyata, N.; Tani, Y.; Iwahori, K.; Soma, M. FEMS Microbiol. Ecol. 2004, 47, 101-109.