Genomic organization and expression of the human mono-ADP-ribosyltransferase ART3 gene

Biochimica et Biophysica Acta - Gene Structure and Expression

Volumn 1759, Issue 6, 2006, Pages 270-280

  Friedrich, Maik ^a   Grahnert, Andreas ^a   Klein, Claudia ^a   Tschöp, Katrin ^a   Engeland, Kurt ^a   Hauschildt, Sunna ^a  

^a UNIVERSITY OF LEIPZIG   (Germany)

Author keywords

5 UTR; Alternative promotor; Alternative splicing; Inverse 5 RACE PCR; Mono ADP ribosyltransferase

Indexed keywords

MESSENGER RNA; NICOTINAMIDE ADENINE DINUCLEOTIDE ADENOSINE DIPHOSPHATE RIBOSYLTRANSFERASE;

5' UNTRANSLATED REGION; ARTICLE; EXON; GENE AMPLIFICATION; GENE EXPRESSION; GENE STRUCTURE; GENOME; HUMAN; HUMAN CELL; MACROPHAGE; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN EXPRESSION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA SPLICING; SEMEN ANALYSIS; SEQUENCE ALIGNMENT; SKELETAL MUSCLE; TESTIS; TONSIL;

5' UNTRANSLATED REGIONS; ADP RIBOSE TRANSFERASES; ALTERNATIVE SPLICING; AMINO ACID SEQUENCE; BASE SEQUENCE; CELLS, CULTURED; CLONING, MOLECULAR; DNA PRIMERS; EXONS; GENE EXPRESSION; HUMANS; MALE; MEMBRANE PROTEINS; MOLECULAR SEQUENCE DATA; PROMOTER REGIONS (GENETICS); REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, MESSENGER; SEQUENCE HOMOLOGY, AMINO ACID; TISSUE DISTRIBUTION; TRANSFECTION;

EID: 33747891033     PISSN: 01674781     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbaexp.2006.06.004     Document Type: Article

References (32)

1. In: Moss J., and Vaughan M. (Eds). ADP-Ribosylating Toxins and G Proteins: Insights into Signal Transduction (1990), American Society for Microbiology, Washington, DC
2. In: Aktories K. (Ed). ADP-Ribosylating Toxins. Current Topics in Microbiology and Immunology (1991), Springer Verlag, Berlin
3. Honjo T., Nishizuka Y., and Hayaishi O. Diphtheria toxin dependent adenosine diphosphate ribosylation of aminoacyl transferase II and inhibition of protein synthesis. J. Biol. Chem. 243 (1968) 3553-3555
4. Zolkiewska A., Nightingale M.S., and Moss J. Molecular characterization of NAD: arginine ADP-ribosyltransferase from rabbit skeletal muscle. Proc. Natl. Acad. Sci. U. S. A. 89 (1992) 11352-11356
5. Okazaki I.J., and Moss J. Glycosylphosphatidylinositol-anchored and secretory isoforms of mono-ADP-ribosyltransferases. J. Biol. Chem. 273 (1998) 23617-23620
6. In: Haag F., and Koch-Nolte F. (Eds). ADP-Ribosylation in Animal Tissues: Structure, Function and Biology of Mono(ADP-Ribosyl) Transferases and Related Enzymes (1997), Plenum Press, New York
7. Glowacki G., Braren R., Firner K., Nissen M., Kuhl M., Reche P., Bazan F., Cetkovic-Cvrlje M., Leiter E., Haag F., and Koch-Nolte F. The family of toxin-related ecto-ADP-ribosyltransferases in humans and the mouse. Protein Sci. 11 (2002) 1657-1670
8. Koch-Nolte F., Haag F., Kastelein R., and Bazan F. Uncovered: the family relationship of a T-cell-membrane protein and bacterial toxins. Immunol. Today 17 (1996) 402-405
9. Seman M., Adriouch S., Scheuplein F., Krebs C., Freese D., Glowacki G., Deterre P., Haag F., and Koch-Nolte F. NAD-induced T cell death: ADP-ribosylation of cell surface proteins by ART2 activates the cytolytic P2X7 purinoceptor. Immunity 19 (2003) 571-582
10. Paone G., Wada A., Stevens L.A., Matin A., Hirayama T., Levine R.L., and Moss J. ADP-ribosylation of human neutrophil peptide-1 regulates its biological properties. Proc. Natl. Acad. Sci. U. S. A. 99 (2002) 8231-8235
11. Saxty B.A., Yadollahi-Farsani M., Upton P.D., Johnstone S.R., and MacDermot J. Inactivation of platelet-derived growth factor-BB following modification by ADP-ribosyltransferase. Br. J. Pharmacol. 133 (2001) 1219-1226
12. Grahnert A., Friedrich M., Pfister M., Haag F., Koch-Nolte F., and Hauschildt S. Mono-ADP-ribosyltransferases in human monocytes: regulation by lipopolysaccharide. Biochem. J. 362 (2002) 717-723
13. Grahnert A., Friedrich M., Engeland K., and Hauschildt S. Analysis of mono-ADP-ribosyltransferase 4 gene expression in human monocytes: splicing pattern and potential regulatory elements. Biochim. Biophys. Acta 1730 (2005) 173-186
14. Friedrich M., Grahnert A., Paasch U., Tannapfel A., Koch-Nolte F., and Hauschildt S. Expression of toxin-related human mono-ADP-ribosyltransferase 3 (ART3) in human testis. Asian J. Androl. 8 (2006) 281-287
15. Grage-Griebenow E., Lorenzen D., Fetting R., Flad H.D., and Ernst M. Phenotypical and functional characterization of Fc gamma receptor I (CD64)-negative monocytes, a minor human monocyte subpopulation with high accessory and antiviral activity. Eur. J. Immunol. 23 (1993) 3126-3135
16. Pfister M., Ogilvie A., da Silva C.P., Grahnert A., Guse A.H., and Hauschildt S. NAD degradation and regulation of CD38 expression by human monocytes/macrophages. Eur. J. Biochem. 268 (2001) 5601-5608
17. Krause K., Wasner M., Reinhard W., Haugwitz U., Dohna C.L., Mossner J., and Engeland K. The tumour suppressor protein p53 can repress transcription of cyclin B. Nucleic Acids Res. 28 (2000) 4410-4418
18. Gebhardt K., Ellerbrock K., Pera I., Ivell R., and Kirchhoff C. Differential expression of novel abundant and highly regionalized mRNAs of the canine epididymis. J. Reprod. Fertil. 116 (1999) 391-402
19. Koch-Nolte F., Duffy T., Nissen M., Kahl S., Ablamunits V., Leiter E.H., and Haag F. A new monoclonal antibody detects a developmentally regulated mouse ecto-ADP-ribosyltransferase on T cells: subset distribution, inbred strain variation, and modulation upon T cell activation. J. Immunol. 163 (1999) 6014-6022
20. Mellon P., Parker V., Gluzman Y., and Maniatis T. Identification of DNA sequences required for transcription of the human alpha 1-globin gene in a new SV40 host-vector system. Cell 27 (1981) 279-288
21. Koch-Nolte F., Glowacki G., Bannas P., Braasch F., Dubberke G., Ortolan E., Funaro A., Malavasi F., and Haag F. Use of genetic immunization to raise antibodies recognizing toxin-related cell surface ADP-ribosytransferases in native conformation. Cell. Immunol. 236 (2005) 66-71
22. Altschul S.F., Gish W., Miller W., Myers E.W., and Lipman D.J. Basic local alignment search tool. J. Mol. Biol. 215 (1990) 403-410
23. Florea L., Hartzell G., Zhang Z., Rubin G.M., and Miller W. A computer program for aligning a cDNA sequence with a genomic DNA sequence. Genome Res. 8 (1998) 967-974
24. Thompson J.D., Higgins D.G., and Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22 (1994) 4673-4680
25. Huang X., and Miller W. A time-efficient, linear-space local similarity algorithm. Adv. Appl. Math. 12 (1991) 337-357
26. In: Baxevanis A.D. (Ed). Modeling Structure from Sequence, In Current Protocols in Bioinformatics (2002), Wiley-VCH Verlag GmbH, Weinheim
27. Thompson J.R., Marcelino L.A., and Polz M.F. Heteroduplexes in mixed-template amplifications: formation, consequence and elimination by 'reconditioning PCR'. Nucleic Acids Res. 30 (2002) 2083-2088
28. Friedrich M., Grahnert A., and Hauschildt S. Analysis of the 3′ UTR of the ART3 and ART4 gene by 3′ inverse RACE-PCR. DNA Seq. 16 (2005) 53-57
29. Storz G. An expanding universe of noncoding RNAs. Science 296 (2002) 1260-1263
30. Conti E., and Izaurralde E. Nonsense-mediated mRNA decay: molecular insights and mechanistic variation across species. Curr. Opin. Cell Biol. 17 (2005) 316-325
31. Thermann R., Neu-Yilik G., Deters A., Frede U., Wehr K., Habemeier C., Hentze M., and Kulozik A.E. Binary specification of nonsense codons by splicing and cytoplasmic translation. EMBO J. 17 (1998) 3484-3494
32. Levy I., Wu Y.Q., Roeckel N., Bulle F., Pawlak A., Siegrist S., Mattei M.G., and Guellaen G. Human testis specifically expresses a homologue of the rodent T lymphocytes RT6 mRNA. FEBS Lett. 382 (1996) 276-280