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Volumn 1759, Issue 6, 2006, Pages 308-318

Directed evolution of plant basic helix-loop-helix transcription factors for the improvement of transactivational properties

Author keywords

Acidic domain; Basic helix loop helix transcription activators; Directed evolution; Interaction domain; Plant transcription factors; Transactivation

Indexed keywords

CHALCONE SYNTHASE; HELIX LOOP HELIX PROTEIN; OXIDOREDUCTASE; TRANSCRIPTION FACTOR E2A;

EID: 33747888500     PISSN: 01674781     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbaexp.2006.04.009     Document Type: Article
Times cited : (18)

References (38)
  • 1
    • 0242574383 scopus 로고    scopus 로고
    • Transcriptional regulation of secondary metabolism
    • Davies K.M., and Schwinn K.E. Transcriptional regulation of secondary metabolism. Funct. Plant Biol. 30 9 (2003) 913-925
    • (2003) Funct. Plant Biol. , vol.30 , Issue.9 , pp. 913-925
    • Davies, K.M.1    Schwinn, K.E.2
  • 2
    • 0037072486 scopus 로고    scopus 로고
    • Transcription factors controlling plant secondary metabolism: what regulates the regulators?
    • Vom Endt D., Kijne J.W., and Memelink J. Transcription factors controlling plant secondary metabolism: what regulates the regulators?. Phytochemistry 61 2 (2002) 107-114
    • (2002) Phytochemistry , vol.61 , Issue.2 , pp. 107-114
    • Vom Endt, D.1    Kijne, J.W.2    Memelink, J.3
  • 3
    • 12144255434 scopus 로고    scopus 로고
    • Induced alpha-helix structure in the aryl hydrocarbon receptor transactivation domain modulates protein-protein interactions
    • Watt K., Jess T.J., Kelly S.M., Price N.C., and McEwan I.J. Induced alpha-helix structure in the aryl hydrocarbon receptor transactivation domain modulates protein-protein interactions. Biochemistry 44 2 (2005) 734-743
    • (2005) Biochemistry , vol.44 , Issue.2 , pp. 734-743
    • Watt, K.1    Jess, T.J.2    Kelly, S.M.3    Price, N.C.4    McEwan, I.J.5
  • 4
    • 0028970090 scopus 로고
    • Structure and function of transcriptional activation domains
    • Triezenberg S.J. Structure and function of transcriptional activation domains. Curr. Opin. Genet. Dev. 5 2 (1995) 190-196
    • (1995) Curr. Opin. Genet. Dev. , vol.5 , Issue.2 , pp. 190-196
    • Triezenberg, S.J.1
  • 5
    • 0032751751 scopus 로고    scopus 로고
    • Evolution of bHLH transcription factors: modular evolution by domain shuffling?
    • Morgenstern B., and Atchley W.R. Evolution of bHLH transcription factors: modular evolution by domain shuffling?. Mol. Biol. Evol. 16 12 (1999) 1654-1663
    • (1999) Mol. Biol. Evol. , vol.16 , Issue.12 , pp. 1654-1663
    • Morgenstern, B.1    Atchley, W.R.2
  • 6
    • 2942744633 scopus 로고    scopus 로고
    • Promoter-targeted phage display selections with preassembled synthetic zinc finger libraries for endogenous gene regulation
    • Lund C.V., Blancafort P., Popkov M., and Barbas III C.F. Promoter-targeted phage display selections with preassembled synthetic zinc finger libraries for endogenous gene regulation. J. Mol. Biol. 340 3 (2004) 599-613
    • (2004) J. Mol. Biol. , vol.340 , Issue.3 , pp. 599-613
    • Lund, C.V.1    Blancafort, P.2    Popkov, M.3    Barbas III, C.F.4
  • 7
    • 29544433799 scopus 로고    scopus 로고
    • Directed evolution of metabolic pathways
    • Chatterjee R., and Yuan L. Directed evolution of metabolic pathways. Trends Biotechnol. 24 1 (2006) 28-38
    • (2006) Trends Biotechnol. , vol.24 , Issue.1 , pp. 28-38
    • Chatterjee, R.1    Yuan, L.2
  • 8
    • 0042692855 scopus 로고    scopus 로고
    • Functional mutants of the sequence-specific transcription factor p53 and implications for master genes of diversity
    • Resnick M.A., and Inga A. Functional mutants of the sequence-specific transcription factor p53 and implications for master genes of diversity. Proc. Natl. Acad. Sci. U. S. A. 100 17 (2003) 9934-9939
    • (2003) Proc. Natl. Acad. Sci. U. S. A. , vol.100 , Issue.17 , pp. 9934-9939
    • Resnick, M.A.1    Inga, A.2
  • 9
    • 13744255893 scopus 로고    scopus 로고
    • Plant metabolic diversity: a regulatory perspective
    • Grotewold E. Plant metabolic diversity: a regulatory perspective. Trends Plant Sci. 10 2 (2005) 57-62
    • (2005) Trends Plant Sci. , vol.10 , Issue.2 , pp. 57-62
    • Grotewold, E.1
  • 10
    • 0034610361 scopus 로고    scopus 로고
    • Identification of the residues in the Myb domain of maize C1 that specify the interaction with the bHLH cofactor R
    • Grotewold E., Sainz M.B., Tagliani L., Hernandez J.M., Bowen B., and Chandler V.L. Identification of the residues in the Myb domain of maize C1 that specify the interaction with the bHLH cofactor R. Proc. Natl. Acad. Sci. U. S. A. 97 25 (2000) 13579-13584
    • (2000) Proc. Natl. Acad. Sci. U. S. A. , vol.97 , Issue.25 , pp. 13579-13584
    • Grotewold, E.1    Sainz, M.B.2    Tagliani, L.3    Hernandez, J.M.4    Bowen, B.5    Chandler, V.L.6
  • 11
    • 0037338381 scopus 로고    scopus 로고
    • Scanning the human genome with combinatorial transcription factor libraries
    • Blancafort P., Magnenat L., and Barbas III C.F. Scanning the human genome with combinatorial transcription factor libraries. Nat. Biotechnol. 21 3 (2003) 269-274
    • (2003) Nat. Biotechnol. , vol.21 , Issue.3 , pp. 269-274
    • Blancafort, P.1    Magnenat, L.2    Barbas III, C.F.3
  • 12
    • 0037711251 scopus 로고    scopus 로고
    • Drug discovery with engineered zinc-finger proteins
    • Jamieson A.C., Miller J.C., and Pabo C.O. Drug discovery with engineered zinc-finger proteins. Nat. Rev. Drug Discov. 2 5 (2003) 361-368
    • (2003) Nat. Rev. Drug Discov. , vol.2 , Issue.5 , pp. 361-368
    • Jamieson, A.C.1    Miller, J.C.2    Pabo, C.O.3
  • 14
    • 0036792098 scopus 로고    scopus 로고
    • Regulation of transgene expression in plants with polydactyl zinc finger transcription factors
    • Ordiz M.I., Barbas III C.F., and Beachy R.N. Regulation of transgene expression in plants with polydactyl zinc finger transcription factors. Proc. Natl. Acad. Sci. U. S. A. 99 20 (2002) 13290-13295
    • (2002) Proc. Natl. Acad. Sci. U. S. A. , vol.99 , Issue.20 , pp. 13290-13295
    • Ordiz, M.I.1    Barbas III, C.F.2    Beachy, R.N.3
  • 15
    • 0347296233 scopus 로고    scopus 로고
    • Controlling gene expression in plants using synthetic zinc finger transcription factors
    • Stege J.T., Guan X., Ho T., Beachy R.N., and Barbas III C.F. Controlling gene expression in plants using synthetic zinc finger transcription factors. Plant J. 32 6 (2002) 1077-1086
    • (2002) Plant J. , vol.32 , Issue.6 , pp. 1077-1086
    • Stege, J.T.1    Guan, X.2    Ho, T.3    Beachy, R.N.4    Barbas III, C.F.5
  • 17
    • 0037694799 scopus 로고    scopus 로고
    • The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity
    • Heim M.A., Jakoby M., Werber M., Martin C., Weisshaar B., and Bailey P.C. The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. Mol. Biol. Evol. 20 5 (2003) 735-747
    • (2003) Mol. Biol. Evol. , vol.20 , Issue.5 , pp. 735-747
    • Heim, M.A.1    Jakoby, M.2    Werber, M.3    Martin, C.4    Weisshaar, B.5    Bailey, P.C.6
  • 18
    • 0042421751 scopus 로고    scopus 로고
    • The Arabidopsis basic/helix-loop-helix transcription factor family
    • Toledo-Ortiz G., Huq E., and Quail P.H. The Arabidopsis basic/helix-loop-helix transcription factor family. Plant Cell 15 8 (2003) 1749-1770
    • (2003) Plant Cell , vol.15 , Issue.8 , pp. 1749-1770
    • Toledo-Ortiz, G.1    Huq, E.2    Quail, P.H.3
  • 19
    • 0026573695 scopus 로고
    • A common gene regulates pigmentation pattern in diverse plant-species
    • Goodrich J., Carpenter R., and Coen E.S. A common gene regulates pigmentation pattern in diverse plant-species. Cell 68 5 (1992) 955-964
    • (1992) Cell , vol.68 , Issue.5 , pp. 955-964
    • Goodrich, J.1    Carpenter, R.2    Coen, E.S.3
  • 20
    • 0033197664 scopus 로고    scopus 로고
    • A constitutively expressed Myc-like gene involved in anthocyanin biosynthesis from Perilla frutescens: molecular characterization, heterologous expression in transgenic plants and transactivation in yeast cells
    • Gong Z.Z., Yamagishi E., Yamazaki M., and Saito K. A constitutively expressed Myc-like gene involved in anthocyanin biosynthesis from Perilla frutescens: molecular characterization, heterologous expression in transgenic plants and transactivation in yeast cells. Plant Mol. Biol. 41 1 (1999) 33-44
    • (1999) Plant Mol. Biol. , vol.41 , Issue.1 , pp. 33-44
    • Gong, Z.Z.1    Yamagishi, E.2    Yamazaki, M.3    Saito, K.4
  • 21
    • 0029139817 scopus 로고
    • Altered regulation of tomato and tobacco pigmentation genes caused by the Delila gene of Antirrhinum
    • Mooney M., Desnos T., Harrison K., Jones J., Carpenter R., and Coen E. Altered regulation of tomato and tobacco pigmentation genes caused by the Delila gene of Antirrhinum. Plant J. 7 2 (1995) 333-339
    • (1995) Plant J. , vol.7 , Issue.2 , pp. 333-339
    • Mooney, M.1    Desnos, T.2    Harrison, K.3    Jones, J.4    Carpenter, R.5    Coen, E.6
  • 24
    • 0028050350 scopus 로고
    • Rapid evolution of a protein in vitro by DNA shuffling
    • Stemmer W.P. Rapid evolution of a protein in vitro by DNA shuffling. Nature 370 6488 (1994) 389-391
    • (1994) Nature , vol.370 , Issue.6488 , pp. 389-391
    • Stemmer, W.P.1
  • 25
    • 0033167393 scopus 로고    scopus 로고
    • Structure and promoter/leader deletion analysis of mirabilis mosaic virus (MMV) full-length transcript promoter in transgenic plants
    • Dey N., and Maiti I.B. Structure and promoter/leader deletion analysis of mirabilis mosaic virus (MMV) full-length transcript promoter in transgenic plants. Plant Mol. Biol. 40 5 (1999) 771-782
    • (1999) Plant Mol. Biol. , vol.40 , Issue.5 , pp. 771-782
    • Dey, N.1    Maiti, I.B.2
  • 26
    • 3142667680 scopus 로고    scopus 로고
    • Isolation of full-length transcript promoter from the Strawberry vein banding virus (SVBV) and expression analysis by protoplasts transient assays and in transgenic plants
    • Pattanaik S., Dey N., Bhattacharyya S., and Maiti I.B. Isolation of full-length transcript promoter from the Strawberry vein banding virus (SVBV) and expression analysis by protoplasts transient assays and in transgenic plants. Plant Sci. 167 3 (2004) 427-438
    • (2004) Plant Sci. , vol.167 , Issue.3 , pp. 427-438
    • Pattanaik, S.1    Dey, N.2    Bhattacharyya, S.3    Maiti, I.B.4
  • 27
    • 0342444416 scopus 로고
    • GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants
    • Jefferson R.A., Kavanagh T.A., and Bevan M.W. GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J. 6 13 (1987) 3901-3907
    • (1987) EMBO J. , vol.6 , Issue.13 , pp. 3901-3907
    • Jefferson, R.A.1    Kavanagh, T.A.2    Bevan, M.W.3
  • 28
    • 3843146246 scopus 로고    scopus 로고
    • An efficient one-step site-directed and site-saturation mutagenesis protocol
    • Zheng L., Baumann U., and Reymond J.L. An efficient one-step site-directed and site-saturation mutagenesis protocol. Nucleic Acids Res. 32 14 (2004) e115
    • (2004) Nucleic Acids Res. , vol.32 , Issue.14
    • Zheng, L.1    Baumann, U.2    Reymond, J.L.3
  • 29
    • 0026638942 scopus 로고
    • Functional analysis of the transcriptional activator encoded by the maize B gene: evidence for a direct functional interaction between two classes of regulatory proteins
    • Goff S.A., Cone K.C., and Chandler V.L. Functional analysis of the transcriptional activator encoded by the maize B gene: evidence for a direct functional interaction between two classes of regulatory proteins. Genes Dev. 6 5 (1992) 864-875
    • (1992) Genes Dev. , vol.6 , Issue.5 , pp. 864-875
    • Goff, S.A.1    Cone, K.C.2    Chandler, V.L.3
  • 30
    • 0031024629 scopus 로고    scopus 로고
    • Extensive mutagenesis of a transcriptional activation domain identifies single hydrophobic and acidic amino acids important for activation in vivo
    • Sainz M.B., Goff S.A., and Chandler V.L. Extensive mutagenesis of a transcriptional activation domain identifies single hydrophobic and acidic amino acids important for activation in vivo. Mol. Cell. Biol. 17 1 (1997) 115-122
    • (1997) Mol. Cell. Biol. , vol.17 , Issue.1 , pp. 115-122
    • Sainz, M.B.1    Goff, S.A.2    Chandler, V.L.3
  • 32
    • 0026086914 scopus 로고
    • Critical structural elements of the VP16 transcriptional activation domain
    • Cress W.D., and Triezenberg S.J. Critical structural elements of the VP16 transcriptional activation domain. Science 251 4989 (1991) 87-90
    • (1991) Science , vol.251 , Issue.4989 , pp. 87-90
    • Cress, W.D.1    Triezenberg, S.J.2
  • 33
    • 0032190285 scopus 로고    scopus 로고
    • Mutational analysis of a transcriptional activation region of the VP16 protein of herpes simplex virus
    • Sullivan S.M., Horn P.J., Olson V.A., Koop A.H., Niu W., Ebright R.H., and Triezenberg S.J. Mutational analysis of a transcriptional activation region of the VP16 protein of herpes simplex virus. Nucleic Acids Res. 26 19 (1998) 4487-4496
    • (1998) Nucleic Acids Res. , vol.26 , Issue.19 , pp. 4487-4496
    • Sullivan, S.M.1    Horn, P.J.2    Olson, V.A.3    Koop, A.H.4    Niu, W.5    Ebright, R.H.6    Triezenberg, S.J.7
  • 34
    • 0009577850 scopus 로고    scopus 로고
    • Critical role of alanine-161 in delila protein involved in regulation of anthocyanin pigmentation for transcriptional activation in yeast
    • Gong Z.Z., Ymamzaki M., and Saito K. Critical role of alanine-161 in delila protein involved in regulation of anthocyanin pigmentation for transcriptional activation in yeast. Plant Biotechnol. 17 4 (2000) 309-314
    • (2000) Plant Biotechnol. , vol.17 , Issue.4 , pp. 309-314
    • Gong, Z.Z.1    Ymamzaki, M.2    Saito, K.3
  • 35
    • 0033841613 scopus 로고    scopus 로고
    • Mechanisms of action of transcription activation and repression domains
    • Roberts S.G. Mechanisms of action of transcription activation and repression domains. Cell. Mol. Life Sci. 57 8-9 (2000) 1149-1160
    • (2000) Cell. Mol. Life Sci. , vol.57 , Issue.8-9 , pp. 1149-1160
    • Roberts, S.G.1
  • 36
    • 1842635751 scopus 로고    scopus 로고
    • Quantitative assessment of in vitro interactions implicates TATA-binding protein as a target of the VP16C transcriptional activation region
    • Nedialkov Y.A., and Triezenberg S.J. Quantitative assessment of in vitro interactions implicates TATA-binding protein as a target of the VP16C transcriptional activation region. Arch. Biochem. Biophys. 425 1 (2004) 77-86
    • (2004) Arch. Biochem. Biophys. , vol.425 , Issue.1 , pp. 77-86
    • Nedialkov, Y.A.1    Triezenberg, S.J.2
  • 37
    • 0029740873 scopus 로고    scopus 로고
    • Functional interaction of the c-Myc transactivation domain with the TATA binding protein: evidence for an induced fit model of transactivation domain folding
    • McEwan I.J., Dahlman-Wright K., Ford J., and Wright A.P. Functional interaction of the c-Myc transactivation domain with the TATA binding protein: evidence for an induced fit model of transactivation domain folding. Biochemistry 35 29 (1996) 9584-9593
    • (1996) Biochemistry , vol.35 , Issue.29 , pp. 9584-9593
    • McEwan, I.J.1    Dahlman-Wright, K.2    Ford, J.3    Wright, A.P.4
  • 38
    • 12344276756 scopus 로고    scopus 로고
    • N and C-terminal sub-regions in the c-Myc transactivation region and their joint role in creating versatility in folding and binding
    • Fladvad M., Zhou K., Moshref A., Pursglove S., Safsten P., and Sunnerhagen M. N and C-terminal sub-regions in the c-Myc transactivation region and their joint role in creating versatility in folding and binding. J. Mol. Biol. 346 1 (2005) 175-189
    • (2005) J. Mol. Biol. , vol.346 , Issue.1 , pp. 175-189
    • Fladvad, M.1    Zhou, K.2    Moshref, A.3    Pursglove, S.4    Safsten, P.5    Sunnerhagen, M.6


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