-
1
-
-
0038219512
-
Haplotyping as a perfect phylogeny. A direct approach
-
V. Bafna, D. Gusfield, G. Lancia, and S. Yooseph, "Haplotyping as a Perfect Phylogeny. A Direct Approach," J. Computational Biology, vol. 10, no. 3, pp. 323-340, 2003.
-
(2003)
J. Computational Biology
, vol.10
, Issue.3
, pp. 323-340
-
-
Bafna, V.1
Gusfield, D.2
Lancia, G.3
Yooseph, S.4
-
2
-
-
0001294529
-
A linear tme algorithm for finding tree-decompositions of small treewidth
-
H.L. Bodlaender, "A Linear Tme Algorithm for Finding Tree-Decompositions of Small Treewidth," SIAM J. Computing, vol. 25, pp. 1305-1317, 1996.
-
(1996)
SIAM J. Computing
, vol.25
, pp. 1305-1317
-
-
Bodlaender, H.L.1
-
4
-
-
0025269067
-
Inference of haplotypes from PCR-amplified samples of diploid populations
-
A.G. Clark, "Inference of Haplotypes from PCR-Amplified Samples of Diploid Populations," Molecular Biology and Evolution, vol. 7, no. 2, pp. 111-122, 1990.
-
(1990)
Molecular Biology and Evolution
, vol.7
, Issue.2
, pp. 111-122
-
-
Clark, A.G.1
-
5
-
-
0029130796
-
Maximum-likelihood estimation of molecular haplotype frequencies in a diploid population
-
L. Excoffier and M. Slatkin, "Maximum-Likelihood Estimation of Molecular Haplotype Frequencies in a Diploid Population," Molecular Biology and Evolution, vol. 12, no. 5, pp. 921-927, 1995.
-
(1995)
Molecular Biology and Evolution
, vol.12
, Issue.5
, pp. 921-927
-
-
Excoffier, L.1
Slatkin, M.2
-
6
-
-
0033794938
-
Accuracy of haplotype frequency estimation for biallelic loci, via the expectation-maximization algorithm for unphased diploid genotype data
-
D. Fallin and N.J. Schork, "Accuracy of Haplotype Frequency Estimation for Biallelic Loci, via the Expectation-Maximization Algorithm for Unphased Diploid Genotype Data," Am. J. Human Genetics, vol. 67, no. 4, pp. 947-59, 2000.
-
(2000)
Am. J. Human Genetics
, vol.67
, Issue.4
, pp. 947-959
-
-
Fallin, D.1
Schork, N.J.2
-
8
-
-
3142516146
-
Model-based inference of haplotype block variation
-
G. Greenspan and D. Geiger, "Model-Based Inference of Haplotype Block Variation," J. Computational Biology, vol. 11, pp. 493-504, 2004.
-
(2004)
J. Computational Biology
, vol.11
, pp. 493-504
-
-
Greenspan, G.1
Geiger, D.2
-
10
-
-
0034812677
-
Inference of haplotypes from samples of diploid populations: Complexity and algorithms
-
D. Gusfield, "Inference of Haplotypes from Samples of Diploid Populations: Complexity and Algorithms," J. Computational Biology, vol. 8, no. 3, pp. 305-324, 2001.
-
(2001)
J. Computational Biology
, vol.8
, Issue.3
, pp. 305-324
-
-
Gusfield, D.1
-
11
-
-
0036374329
-
Haplotyping as perfect phylogeny: Conceptual framework and efficient solutions
-
D. Gusfield, "Haplotyping as Perfect Phylogeny: Conceptual Framework and Efficient Solutions (extended abstract)," Proc. Sixth Ann. Int'l Conf. Computational Molecular Biology, pp. 166-175, 2002.
-
(2002)
Proc. Sixth Ann. Int'l Conf. Computational Molecular Biology
, pp. 166-175
-
-
Gusfield, D.1
-
13
-
-
35048855546
-
A survey of computational methods for determining haplotypes
-
B.V. Halldórsson, V. Bafna, N. Edwards, R. Lippert, S. Yooseph, and S. Istrail, "A Survey of Computational Methods for Determining Haplotypes," Proc. Computational Methods for SNPs and Haplotype Inference, pp. 26-47, 2004.
-
(2004)
Proc. Computational Methods for SNPs and Haplotype Inference
, pp. 26-47
-
-
Halldórsson, B.V.1
Bafna, V.2
Edwards, N.3
Lippert, R.4
Yooseph, S.5
Istrail, S.6
-
14
-
-
4444367508
-
Haplotype reconstruction from genotype data using imperfect phylogeny
-
E. Halperin and E. Eskin, "Haplotype Reconstruction from Genotype Data Using Imperfect Phylogeny," Bioinformatics, vol. 20, pp. 1842-1849, 2004.
-
(2004)
Bioinformatics
, vol.20
, pp. 1842-1849
-
-
Halperin, E.1
Eskin, E.2
-
16
-
-
0029372419
-
HAPLO: A program using the em algorithm to estimate the frequencies of multi-site haplotypes
-
M.E. Hawley and K.K. Kidd, "HAPLO: A Program Using the EM Algorithm to Estimate the Frequencies of Multi-Site Haplotypes," J. Heredity, vol. 86, pp. 409-411, 1995.
-
(1995)
J. Heredity
, vol.86
, pp. 409-411
-
-
Hawley, M.E.1
Kidd, K.K.2
-
17
-
-
33644502168
-
An approximation algorithm for haplotype inference by maximum parsimony
-
Y.-T. Huang, K.-M. Chao, and T. Chen, "An Approximation Algorithm for Haplotype Inference by Maximum Parsimony," Proc. ACM Symp. Applied Computing, pp. 146-150, 2005.
-
(2005)
Proc. ACM Symp. Applied Computing
, pp. 146-150
-
-
Huang, Y.-T.1
Chao, K.-M.2
Chen, T.3
-
19
-
-
10044241629
-
Haplotyping populations by pure parsimony. complexity, exact and approximation algorithms
-
G. Lancia, M.C. Pinotti, and R. Rizzi, "Haplotyping Populations by Pure Parsimony. Complexity, Exact and Approximation Algorithms," INFORMS J. Computing, vol. 16, pp. 348-359, 2004.
-
(2004)
INFORMS J. Computing
, vol.16
, pp. 348-359
-
-
Lancia, G.1
Pinotti, M.C.2
Rizzi, R.3
-
20
-
-
1642386075
-
A note on the single genotype resolution problem
-
H. Lin, Z.-F. Zhang, DQ.-F. Zhang, D.-B. Bu, and M. Li, "A Note on the Single Genotype Resolution Problem," J. Computer Science and Technology, vol. 19, pp. 254-257, 2004.
-
(2004)
J. Computer Science and Technology
, vol.19
, pp. 254-257
-
-
Lin, H.1
Zhang, Z.-F.2
Zhang, D.Q.-F.3
Bu, D.-B.4
Li, M.5
-
21
-
-
0028913523
-
An E-M algorithm and testing strategy for multiple-locus haplotypes
-
J.C. Long, R.C. Williams, and M. Urbanek, "An E-M Algorithm and Testing Strategy for Multiple-Locus Haplotypes," Am. J. Human Genetics, vol. 56, no. 2, pp. 799-810, 1995.
-
(1995)
Am. J. Human Genetics
, vol.56
, Issue.2
, pp. 799-810
-
-
Long, J.C.1
Williams, R.C.2
Urbanek, M.3
-
22
-
-
0036138183
-
Bayesian haplotype inference for multiple linked single-nucleotide polymorphisms
-
T. Niu, Z.S. Qin, X. Xu, and J.S. Liu, "Bayesian Haplotype Inference for Multiple Linked Single-Nucleotide Polymorphisms," Am. J. Human Genetics, vol. 70, pp. 157-169, 2002.
-
(2002)
Am. J. Human Genetics
, vol.70
, pp. 157-169
-
-
Niu, T.1
Qin, Z.S.2
Xu, X.3
Liu, J.S.4
-
23
-
-
0035941029
-
Blocks of limited haplotype diversity revealed by high resolution scanning of human chromosome 21
-
N. Patil et al., "Blocks of Limited Haplotype Diversity Revealed by High Resolution Scanning of Human Chromosome 21," Science, vol. 294, pp. 1719-1723, 2001.
-
(2001)
Science
, vol.294
, pp. 1719-1723
-
-
Patil, N.1
-
24
-
-
0001326115
-
The hardness of approximations: Gap location
-
E. Petrank, "The Hardness of Approximations: Gap Location," Computational Complexity, vol. 4, pp. 133-157, 1994.
-
(1994)
Computational Complexity
, vol.4
, pp. 133-157
-
-
Petrank, E.1
-
26
-
-
0035071957
-
A new statistical method for haplotype reconstruction from population data
-
M. Stephens, N.J. Smith, and P. Donnelly, "A New Statistical Method for Haplotype Reconstruction from Population Data," Am. J. Human Genetics, vol. 68, pp. 978-989, 2001.
-
(2001)
Am. J. Human Genetics
, vol.68
, pp. 978-989
-
-
Stephens, M.1
Smith, N.J.2
Donnelly, P.3
-
27
-
-
0141617556
-
Haplotype inference by maximum parsimony
-
L. Wang and Y. Xu, "Haplotype Inference by Maximum Parsimony," Bioinformatics, vol. 19, pp. 1773-1780, 2003.
-
(2003)
Bioinformatics
, vol.19
, pp. 1773-1780
-
-
Wang, L.1
Xu, Y.2
|