메뉴 건너뛰기




Volumn 32, Issue 2, 2006, Pages 179-196

A robust set of black walnut microsatellites for parentage and clonal identification

Author keywords

Allele sharing; Exclusion probability; Genetic diversity; Juglans nigra; nSSRs; Outcrossing rate

Indexed keywords

BIODIVERSITY; GEOGRAPHICAL REGIONS; SAMPLING;

EID: 33747147200     PISSN: 01694286     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11056-005-5961-7     Document Type: Article
Times cited : (41)

References (43)
  • 1
    • 0002748896 scopus 로고
    • Using genetic markers to measure gene flow and pollen dispersal in forest tree seed orchards
    • Chapman and Hall New York
    • W.T. Adams D.S. Birkes V.J. Erickson 1992 Using genetic markers to measure gene flow and pollen dispersal in forest tree seed orchards R. Wyatt Ecology and Evolution of Plant Reproduction Chapman and Hall New York 37 61
    • (1992) Ecology and Evolution of Plant Reproduction , pp. 37-61
    • Adams, W.T.1    Birkes, D.S.2    Erickson, V.J.3    Wyatt, R.4
  • 2
    • 0032147078 scopus 로고    scopus 로고
    • Microsatellite analysis of demographic genetic structure in fragmented populations of the tropical tree Symphonia globulifera
    • P.R. Aldrich J.L. Hamrick P. Chavarriaga G. Kochert 1998 Microsatellite analysis of demographic genetic structure in fragmented populations of the tropical tree Symphonia globulifera Mol. Ecol. 7 933 944
    • (1998) Mol. Ecol. , vol.7 , pp. 933-944
    • Aldrich, P.R.1    Hamrick, J.L.2    Chavarriaga, P.3    Kochert, G.4
  • 4
    • 0003043028 scopus 로고
    • Twenty years of black walnut genetic improvement at Purdue University
    • W.F. Beineke 1989 Twenty years of black walnut genetic improvement at Purdue University North. J. Appl. Forest 6 68 71
    • (1989) North. J. Appl. Forest , vol.6 , pp. 68-71
    • Beineke, W.F.1
  • 6
    • 0042349265 scopus 로고    scopus 로고
    • Allozyme variation and mating system of black walnut (Juglans nigra L.) in the Central Hardwood Region of the United States
    • V.B. Busov G. Rink K. Woeste 2002 Allozyme variation and mating system of black walnut (Juglans nigra L.) in the Central Hardwood Region of the United States Forest Genet. 9 319 326
    • (2002) Forest Genet. , vol.9 , pp. 319-326
    • Busov, V.B.1    Rink, G.2    Woeste, K.3
  • 9
    • 0036860522 scopus 로고    scopus 로고
    • Limited hybridization between Quercus lobata and Quercus douglasii (Fagaceae) in a mixed stand in central coastal California
    • K.J. Craft M.V. Ashley W.D. Koenig 2002 Limited hybridization between Quercus lobata and Quercus douglasii (Fagaceae) in a mixed stand in central coastal California Am. J. Bot. 89 1792 1798
    • (2002) Am. J. Bot. , vol.89 , pp. 1792-1798
    • Craft, K.J.1    Ashley, M.V.2    Koenig, W.D.3
  • 10
    • 0037157025 scopus 로고    scopus 로고
    • Novel perspectives in wood certification and forensics: Dry wood as a source of DNA
    • M.F. Deguilloux M.H. Pemonge R.J. Petit 2002 Novel perspectives in wood certification and forensics: dry wood as a source of DNA Phil. Roy. Soc. Lond. B Biol. 269 1039 1046
    • (2002) Phil. Roy. Soc. Lond. B Biol. , vol.269 , pp. 1039-1046
    • Deguilloux, M.F.1    Pemonge, M.H.2    Petit, R.J.3
  • 11
    • 0030484055 scopus 로고    scopus 로고
    • Microsatellite analysis of seed dispersal and parentage of saplings in bur oak, Quercus macrocarpa
    • B.D. Dow M.V. Ashley 1996 Microsatellite analysis of seed dispersal and parentage of saplings in bur oak, Quercus macrocarpa Mol. Ecol. 5 615 627
    • (1996) Mol. Ecol. , vol.5 , pp. 615-627
    • Dow, B.D.1    Ashley, M.V.2
  • 12
    • 0034070048 scopus 로고    scopus 로고
    • Polymorphic DNA markers in black cherry (Prunus serotina) are identified using sequences from sweet cherry, peachand sour cherry
    • S. Downey A.L. Iezzoni 2000 Polymorphic DNA markers in black cherry (Prunus serotina) are identified using sequences from sweet cherry, peachand sour cherry J. Am. Soc. Hort. Sci. 125 76 80
    • (2000) J. Am. Soc. Hort. Sci. , vol.125 , pp. 76-80
    • Downey, S.1    Iezzoni, A.L.2
  • 13
    • 0003437299 scopus 로고
    • Department of Genetics, University of Washington, Seattle
    • Felsenstein J. 1993. PHYLIP (Phylogeny Inference Package). Version 3.5c. Department of Genetics, University of Washington, Seattle (Program available from: http://evolution.genetics.washington.edu/phylip.html).
    • (1993) PHYLIP (Phylogeny Inference Package). Version 3.5c
    • Felsenstein, J.1
  • 14
    • 0042976588 scopus 로고    scopus 로고
    • Effects of native forest regeneration practices on genetic diversity in Eucalyptus consideniana
    • J.C. Glaubitz J.C. Murrell G.F. Moran 2003 Effects of native forest regeneration practices on genetic diversity in Eucalyptus consideniana Theor. Appl. Genet. 107 422 431
    • (2003) Theor. Appl. Genet. , vol.107 , pp. 422-431
    • Glaubitz, J.C.1    Murrell, J.C.2    Moran, G.F.3
  • 16
    • 0031433288 scopus 로고    scopus 로고
    • Comparison of three probability formulae for parentage exclusion
    • A. Jamieson St. C.S. Taylor 1997 Comparison of three probability formulae for parentage exclusion Anim. Genet. 28 397 400
    • (1997) Anim. Genet. , vol.28 , pp. 397-400
    • Jamieson, A.1    Taylor St., C.S.2
  • 17
    • 0035210897 scopus 로고    scopus 로고
    • Polymix breeding with parental analysis of progeny: An alternative to full-sib breeding and testing
    • C. Lambeth B.C. Lee D. O'Malley N. Wheeler 2001 Polymix breeding with parental analysis of progeny: an alternative to full-sib breeding and testing Theor. Appl. Genet. 103 930 943
    • (2001) Theor. Appl. Genet. , vol.103 , pp. 930-943
    • Lambeth, C.1    Lee, B.C.2    O'Malley, D.3    Wheeler, N.4
  • 18
    • 0032917842 scopus 로고    scopus 로고
    • An efficient micro-method of DNA isolation from mature leaves of four hardwood tree species Acer, Fraxinus, Prunus and Quercus
    • F. Lefort G.C. Douglas 1999 An efficient micro-method of DNA isolation from mature leaves of four hardwood tree species Acer, Fraxinus, Prunus and Quercus Ann. Forest Sci. 56 259 263
    • (1999) Ann. Forest Sci. , vol.56 , pp. 259-263
    • Lefort, F.1    Douglas, G.C.2
  • 20
    • 0032815244 scopus 로고    scopus 로고
    • Microsatellite analysis of maternal half-sib families of Quercus roburpendunculate oak: Detection of seed contaminations and inference of the seed parents from the offspring
    • C. Lexer B. Heinze H. Steinkeller S. Kampfer B. Ziegenhagen J. Glossl 1999 Microsatellite analysis of maternal half-sib families of Quercus roburpendunculate oak: detection of seed contaminations and inference of the seed parents from the offspring Theor. Appl. Genet. 99 185 191
    • (1999) Theor. Appl. Genet. , vol.99 , pp. 185-191
    • Lexer, C.1    Heinze, B.2    Steinkeller, H.3    Kampfer, S.4    Ziegenhagen, B.5    Glossl, J.6
  • 21
    • 0032982071 scopus 로고    scopus 로고
    • Statistical analysis of microsatellite DNA data
    • G. Luikart P.R. England 1999 Statistical analysis of microsatellite DNA data Trends. Ecol. Evol. 14 253 255
    • (1999) Trends. Ecol. Evol. , vol.14 , pp. 253-255
    • Luikart, G.1    England, P.R.2
  • 24
    • 0031823046 scopus 로고    scopus 로고
    • What molecules can tell us about populations: Choosing and using a molecular marker
    • P.G. Parker A.A. Snow M.D. Schug G.C. Booton P.A. Fuerst 1998 What molecules can tell us about populations: choosing and using a molecular marker Ecology 79 361 382
    • (1998) Ecology , vol.79 , pp. 361-382
    • Parker, P.G.1    Snow, A.A.2    Schug, M.D.3    Booton, G.C.4    Fuerst, P.A.5
  • 25
    • 0001147007 scopus 로고
    • Estimation of Juglans nigra L. mating system parameters
    • G. Rink E.R. Carroll F.H. Kung 1989 Estimation of Juglans nigra L. mating system parameters Forest Sci. 35 623 627
    • (1989) Forest Sci. , vol.35 , pp. 623-627
    • Rink, G.1    Carroll, E.R.2    Kung, F.H.3
  • 26
    • 0028311873 scopus 로고
    • Mating parameters in Juglans nigra L. - Seed orchard similar to natural population estimates
    • G. Rink G. Zhang Z. Jinghua F.H. Kung E.R. Carroll 1994 Mating parameters in Juglans nigra L. - seed orchard similar to natural population estimates Silvae Genet. 43 261 263
    • (1994) Silvae Genet. , vol.43 , pp. 261-263
    • Rink, G.1    Zhang, G.2    Jinghua, Z.3    Kung, F.H.4    Carroll, E.R.5
  • 27
    • 85047683041 scopus 로고    scopus 로고
    • Extensions of models for the estimation of mating systems using n independent loci
    • K. Ritland 2002 Extensions of models for the estimation of mating systems using n independent loci Heredity 88 221 228
    • (2002) Heredity , vol.88 , pp. 221-228
    • Ritland, K.1
  • 28
    • 84966167686 scopus 로고
    • A model for the estimation of outcrossing rate and gene frequencies using n independent loci
    • K. Ritland S.K. Jain 1981 A model for the estimation of outcrossing rate and gene frequencies using n independent loci Heredity 47 35 52
    • (1981) Heredity , vol.47 , pp. 35-52
    • Ritland, K.1    Jain, S.K.2
  • 29
    • 0023375195 scopus 로고
    • The Neighbor-Joining method: A new method for reconstructing phylogenetic trees
    • N. Saitou M. Nei 1987 The Neighbor-Joining method: a new method for reconstructing phylogenetic trees Mol. Biol. Evol. 4 406 425
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 30
    • 0033034284 scopus 로고    scopus 로고
    • Pollen dispersal inferred from paternity analysis in a mixed oak stand of Quercus robur L. and Q. petraea (Matt.) Liebl
    • R. Streiff A. Ducousso C. Lexer H. Steinkellner J. Gloessl A. Kremer 1999 Pollen dispersal inferred from paternity analysis in a mixed oak stand of Quercus robur L. and Q. petraea (Matt.) Liebl Mol. Ecol. 8 831 841
    • (1999) Mol. Ecol. , vol.8 , pp. 831-841
    • Streiff, R.1    Ducousso, A.2    Lexer, C.3    Steinkellner, H.4    Gloessl, J.5    Kremer, A.6
  • 31
    • 0037706891 scopus 로고    scopus 로고
    • The use of PCR based DNA markers to study the paternity of poplar seedlings
    • H.E. Tabbener J.E. Cottrell 2003 The use of PCR based DNA markers to study the paternity of poplar seedlings Forest Ecol. Manage. 179 363 376
    • (2003) Forest Ecol. Manage. , vol.179 , pp. 363-376
    • Tabbener, H.E.1    Cottrell, J.E.2
  • 32
    • 0016558105 scopus 로고
    • The estimation of pairwise relationships
    • E.A. Thompson 1975 The estimation of pairwise relationships Ann. Hum. Genet. 39 173 188
    • (1975) Ann. Hum. Genet. , vol.39 , pp. 173-188
    • Thompson, E.A.1
  • 33
    • 0038048714 scopus 로고    scopus 로고
    • Fingerprinting for quality control in breeding and deployment
    • R.E. Vaillancourt S. Skabo P.L. Gore 1998 Fingerprinting for quality control in breeding and deployment Aust. Forestry 61 207 210
    • (1998) Aust. Forestry , vol.61 , pp. 207-210
    • Vaillancourt, R.E.1    Skabo, S.2    Gore, P.L.3
  • 34
    • 0342646957 scopus 로고    scopus 로고
    • Development and characterization of microsatellite markers in black poplar (Populus nigra L.)
    • J. van der Schoot M. Pospiskova B. Vosman M.J.M. Smulders 2000 Development and characterization of microsatellite markers in black poplar (Populus nigra L.) Theor. Appl. Genet. 101 317 322
    • (2000) Theor. Appl. Genet. , vol.101 , pp. 317-322
    • Van Der Schoot, J.1    Pospiskova, M.2    Vosman, B.3    Smulders, M.J.M.4
  • 35
    • 31944439521 scopus 로고    scopus 로고
    • Genetic homogeneity in Juglans nigra (Juglandaceae) at nuclear microsatellites
    • (In Press)
    • Victory E., Glaubitz J., Rhodes O.E. and Woeste K. 2006. Genetic homogeneity in Juglans nigra (Juglandaceae) at nuclear microsatellites. Am. J. Bot. (In Press)
    • (2006) Am. J. Bot.
    • Victory, E.1    Glaubitz, J.2    Rhodes, O.E.3    Woeste, K.4
  • 36
    • 0037474150 scopus 로고    scopus 로고
    • Genetic structure of walnut genotypes using leaf isozymes as variability measure
    • D. Vyas S.K. Sharma D.R. Sharma 2003 Genetic structure of walnut genotypes using leaf isozymes as variability measure Sci. Hort.-Amsterdam 97 141 152
    • (2003) Sci. Hort.-Amsterdam , vol.97 , pp. 141-152
    • Vyas, D.1    Sharma, S.K.2    Sharma, D.R.3
  • 37
    • 0035144122 scopus 로고    scopus 로고
    • Estimating the probability of identity among genotypes in natural populations: Cautions and guidelines
    • L.P. Waits G. Luikart P. Taberlet 2001 Estimating the probability of identity among genotypes in natural populations: cautions and guidelines Mol. Ecol. 10 249 256
    • (2001) Mol. Ecol. , vol.10 , pp. 249-256
    • Waits, L.P.1    Luikart, G.2    Taberlet, P.3
  • 38
    • 0024582686 scopus 로고
    • Abundant class of human DNA polymorphism which can be typed using the polymerase chain reaction
    • J.L. Weber P.E. May 1989 Abundant class of human DNA polymorphism which can be typed using the polymerase chain reaction Am. J. Hum. Genet. 44 388 396
    • (1989) Am. J. Hum. Genet. , vol.44 , pp. 388-396
    • Weber, J.L.1    May, P.E.2
  • 39
    • 0021566877 scopus 로고
    • Estimating F-statistics for the analysis of population structure
    • B.S. Weir C.C. Cockerham 1984 Estimating F-statistics for the analysis of population structure Evolution 38 1358 1370
    • (1984) Evolution , vol.38 , pp. 1358-1370
    • Weir, B.S.1    Cockerham, C.C.2
  • 42
    • 0036189062 scopus 로고    scopus 로고
    • Heartwood production in a 35-year-old black walnut progeny test
    • K.E. Woeste 2002 Heartwood production in a 35-year-old black walnut progeny test Can. J. Forest Res. 32 177 181
    • (2002) Can. J. Forest Res. , vol.32 , pp. 177-181
    • Woeste, K.E.1
  • 43
    • 0036251787 scopus 로고    scopus 로고
    • Thirty polymorphic nuclear microsatellite loci from black walnut
    • K. Woeste R. Burns O. Rhodes C. Michler 2002 Thirty polymorphic nuclear microsatellite loci from black walnut J. Hered. 93 58 60
    • (2002) J. Hered. , vol.93 , pp. 58-60
    • Woeste, K.1    Burns, R.2    Rhodes, O.3    Michler, C.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.