Phylogeography and post-glacial colonization patterns of the rainbow darter, Etheostoma caeruleum (Teleostei: Percidae)

Journal of Biogeography

Volumn 33, Issue 9, 2006, Pages 1550-1558

  Ray, Jeffery M ^a   Wood, Robert M ^a   Simons, Andrew M ^b  

^a SAINT LOUIS UNIVERSITY   (United States)

^b UNIVERSITY OF MINNESOTA   (United States)

Author keywords

Biogeography; Cytochrome b; Drainage history; Eastern North America; Freshwater fish; Glaciation; Mississippi embayment; Ozarks; Pleistocene; Stream drainage relationships

Indexed keywords

BIOGEOGRAPHY; CLADISTICS; CLIMATE CHANGE; CLIMATE EFFECT; DRAINAGE; FISH; GEOGRAPHICAL DISTRIBUTION; MITOCHONDRIAL DNA; PHYLOGEOGRAPHY; TELEOST;

NORTH AMERICA;

ETHEOSTOMA CAERULEUM; PERCIDAE; TELEOSTEI;

EID: 33747059562     PISSN: 03050270     EISSN: 13652699     Source Type: Journal    
DOI: 10.1111/j.1365-2699.2006.01540.x     Document Type: Article

References (38)

1. Avise, J.C. (2000) Phylogeography: the history and formation of species. Harvard University Press, Cambridge, MA.
2. Berendzen, P.B., Simons, A.M. & Wood, R.M. (2003) Phylogeography of the northern hogsucker, Hypentelium nigricans (Teleostei: Cypriniformes): genetic evidence for the existence of the ancient Teays River. Journal of Biogeography, 30, 1139-1152.
3. Bernatchez, L. & Wilson, C.C. (1998) Comparative phylogeography of Nearctic and Palearctic fishes. Molecular Ecology, 7, 431-452.
4. Clement, M., Posada, D. & Crandall, K.A. (2000) TCS: a computer program to estimate gene genealogies. Molecular Ecology, 9, 1657-1659.
5. Danzmann, R.G., Morgan, R.P., II, Jones, M.W., Bernatchez, L. & Ihssen, P.E. (1998) A major sextet of mitochondrial DNA phylogenetic assemblages extant in eastern North American brook trout (Salvelinus fontinalis): distribution and postglacial dispersal patterns. Canadian Journal of Zoology, 76, 1300-1318.
6. Excoffier, L., Smouse, P.E. & Quattro, J.M. (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics, 131, 479-491.
7. Felsenstein, J. (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution, 39, 783-791.
8. Fisk, H.N. (1944) Geological investigation of the alluvial valley of the lower Mississippi River. US Army Corps of Engineers, Mississippi River Commission. Vicksburg, MS, USA.
9. Flint, R.F. (1971) Glacial and Quaternary geology. John Wiley and Sons, New York.
10. Funk, D.J. & Omland, K.E. (2003) Species-level paraphyly and polyphyly: frequency, causes, and consequences, with insights from animal mitochondrial DNA. Annual Review of Ecology, Evolution, and Systematics, 34, 397-423.
11. Gerking, S.D. (1945) Distribution of the fishes of Indiana. Investigations of Indiana Lakes and Streams, 3, 1-137.
12. Gerking, S.D. (1947) The use of minor postglacial drainage connections by fishes in Indiana. Copeia, 1947, 89-91.
13. Gum, B., Gross, R. & Kuehn, R. (2005) Mitochondrial and nuclear DNA phylogeography of European grayling (Thymallus thymallus): evidence for secondary contact zones in central Europe. Molecular Ecology, 14, 1707-1725.
14. Hardy, M.E., Grady, J.M. & Routman, E.J. (2002) Intraspecific phylogeography of the slender madtom: the complex evolutionary history of the Central Highlands of the United States. Molecular Ecology, 11, 2393-2403.
15. Knapp, L.W. (1964) Systematic studies of the rainbow darter, Etheostoma caeruleum (Storer) and the subgenus Hadropterus (Pisces, Percidae). PhD thesis, Cornell University, Ithaca, NY.
16. Kumar, S., Tamura, K. & Nei, M. (2004) MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Briefings in Bioinformatics, 5, 150-163.
17. Maddison, D.R. & Maddison, W.P. (2000) MacClade 4: analysis of phylogeny and character evolution. Sinauer Associates, Sunderland, MA.
18. McCormick, F.H. (1991) Systematics and relationships of the Etheostoma caeruleum species complex (Pisces: Percidae). PhD thesis, University of Oklahoma, Norman, OK.
19. Near, T.J., Page, L.M. & Mayden, R.L. (2001) Intraspecific phylogeography of Percina evides (Percidae: Etheostomatinae): an additional test of the Central Highlands pre-Pleistocene vicariance hypothesis. Molecular Ecology, 10, 2235-2240.
20. Nei, M. & Li, W.-H. (1979) Mathematical model for studying genetic variation in terms of restriction endonucleases. Proceedings of the National Academy of Sciences of the United States of America, 76, 5269-5273.
21. Nylander, J.A.A. (2004) MrModeltest v2.2. Program distributed by the author, Evolutionary Biology Centre, Uppsala University, Uppsala, Sweden.
22. Page, L.M. (1983) The handbook of darters. TFH Publications Inc., Neptune City, NJ.
23. Pflieger, W.L. (1971) A distributional study of Missouri fishes. Museum of Natural History, University of Kansas Publications, 20, 225-570.
24. Pflieger, W.L. (1997) The fishes of Missouri. Missouri Department of Conservation, Jefferson City, MO.
25. Ronquist, F. & Huelsenbeck, J.P. (2003) MrBayes3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19, 1572-1574.
26. Schmidt, T.R. & Gold, J.R. (1993) Complete sequence of the mitochondrial cytochrome b gene in the cherryfin shiner, Lythrurus roseipinnis (Teleostei: Cyprinidae). Copeia, 1993, 880-883.
27. Schneider, S., Roessli, D. & Excoffier, L. (2000) Arlequin: a software for population genetic data. Genetics and Biometry Laboratory, University of Geneva, Geneva, Switzerland.
28. Simons, A.M. (2004) Phylogenetic relationships of the genus Erimystax (Actinopterygii: Cyprinidae) based on the cytochrome b gene. Copeia, 2004, 350-355.
29. Stamford, M.D. & Taylor, E.B. (2004) Phylogeographical lineages of Arctic grayling (Thymallus arcticus) in North America: divergence, origins and affinities with Eurasian Thymallus. Molecular Ecology, 13, 1533-1549.
30. Stauffer, J.R., Jr & Hocutt, C.H. (1980) Etheostoma caeruleum. Atlas of North American freshwater fishes (ed. by D.S. Lee, C.R. Gilbert, C.H. Hocutt, R.E. Jenkins, D.E. McAllister and J.R. Stauffer Jr), p. 631. North Carolina State Museum of Natural History, Raleigh, NC.
31. Strange, R.M. & Burr, B.M. (1997) Intraspecific phylogeography of North American highland fishes: a test of the Pleistocene vicariance hypothesis. Evolution, 51, 885-987.
32. Switzer, J.F. (2004) Molecular systematics and phylogeography of the Etheostoma variatum species group (Actinopterygii: Percidae). PhD thesis, Saint Louis University, St Louis, MO.
33. Switzer, J.F. & Wood, R.M. (2002) Molecular systematics and historical biogeography of the Missouri saddled darter Etheostoma tetrazonum (Actinopterygii: Percidae). Copeia, 2002, 450-455.
34. Swofford, D.L. (2003) PAUP* Phylogenetic Analysis Using Parsimony (* and Other Methods). 4.0b10. Sinauer, Sunderland, MA.
35. Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F. & Higgins, D.G. (1997) The ClustalX Windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research, 24, 4876-4882.
36. Thornbury, W.D. (1965) Regional geomorphology of the United States. John Wiley and Sons, New York.
37. Turner, T.F. & Trexler, J.C. (1998) Ecological and historical associations of gene flow in darters (Teleostei: Percidae). Evolution, 52, 1781-1801.
38. Wilson, C.C. & Hebert, P.D.N. (1996) Phylogeographic origins of lake trout (Salvelinus namaycush) in eastern North America. Canadian Journal of Fisheries and Aquatic Sciences, 53, 2764-2775.