Intraspecific phylogeography of the slender madtom: The complex evolutionary history of the Central Highlands of the United States

Molecular Ecology

Volumn 11, Issue 11, 2002, Pages 2393-2403

  Hardy, M E ^a   Grady, J M ^b   Routman, E J ^a  

^a SAN FRANCISCO STATE UNIVERSITY   (United States)

^b UNIVERSITY OF NEW ORLEANS   (United States)

Author keywords

Area cladogram; mtDNA variation; ND4; Nucleotide sequencing; Phylogeography

Indexed keywords

AKYSIDAE; CATFISH; NOTURUS; NOTURUS EXILIS; VERTEBRATA;

MITOCHONDRIAL DNA; NADH DEHYDROGENASE SUBUNIT 4; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE DEHYDROGENASE; TRANSFER RNA;

ANIMAL; ARTICLE; CATFISH; EVOLUTION; GENETIC VARIABILITY; GENETICS; HAPLOTYPE; MOLECULAR GENETICS; PHYLOGENY; POPULATION GENETICS; SPECIES DIFFERENCE; UNITED STATES;

ANIMALS; DNA, MITOCHONDRIAL; EVOLUTION; GENETICS, POPULATION; HAPLOTYPES; ICTALURIDAE; MOLECULAR SEQUENCE DATA; NADH DEHYDROGENASE; PHYLOGENY; RNA, TRANSFER; SPECIES SPECIFICITY; UNITED STATES; VARIATION (GENETICS);

EID: 0036845327     PISSN: 09621083     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-294X.2002.01616.x     Document Type: Article

References (41)

1. Arévalo E, Davis SK, Sites JW Jr (1994) Mitochondrial DNA sequence divergence and phylogenetic relationships among eight chromosome races of the Sceloporus grammicus complex (Phrynosomatidae) in Central Mexico. Systematic Biology, 43, 387-418.
2. Avise JC (1992) Molecular population structure and the biogeographic history of a regional fauna: A case history with lessons for conservation biology. Okios, 63, 62-76.
3. Avise JC, Arnold J, Ball RM et al. (1987) Intraspecific phylogeography: The mitochondrial bridge between population genetics and systematics. Annual Review of Ecology and Systematics, 18, 489-522.
4. Avise JC, Walker D, Johns GC (1998) Speciation durations and Pleistocene effects on vertebrate phylogeography. Proceedings of the Royal Society of London: Series B, 265, 1707-1712.
5. Bermingham E, Avise JC (1986) Molecular zoogeography of freshwater fishes in the southeastern United States. Genetics, 113, 939-965.
6. Blouin MS, Yowell CA, Courtney CH, Dame JB (1998) Substitution bias, rapid saturation, and the use of mtDNA for nematode systematics. Molecular Biology and Evolution, 15, 1719-1727.
7. Brown AV, Armstrong ML (1985) Propensity to drift downstream among various species of fish. Journal of Freshwater Ecology, 3, 3-17.
8. Crandall KA, Templeton AR (1999) The zoogeography and centers of origin of the crayfish subgenus Procericambarus (Decapoda: Cambaridae). Evolution, 53, 123-134.
9. Felsenstein J (1985) Phylogenies and the comparative method. American Naturalist, 125, 1-15.
10. Grady JM, Cashner RC, Rogers JS (1990) Evolutionary and biogeographic relationships of Fundulus catenatus (Fundulidae). Copeia, 2, 315-323.
11. Grady JM, LeGrande WH (1992) Phylogenetic relationships, modes of speciation, and historical biogeography of the madtom catfishes, genus Noturus Rafinesque (Siluriformes: Ictaluridae). In: Systematics, Historical Ecology, and North American Freshwater Fishes (ed. Mayden RL), pp. 747-777. Stanford University Press, Stanford, CA.
12. Hillis DL, Mable BK, Larson A, Davis SK, Zimmer EA (1996) Nucleic acids IV: Sequencing and cloning. In: Molecular Systematics (eds Hillis DM, Moritz C, Mable BK), pp. 321-381. Sinauer Associates, Inc., Sunderland, MA.
13. Kishino H, Hasegawa M (1989) Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in the Hominoidea. Journal of Molecular Evolution, 29, 170-179.
14. Lundberg JG (1975) The fossil catfishes of North America. Papers on Paleontology. Museum of Paleontology, University of Michigan, Papers in Paleontology, 11, 1-51.
15. Lundberg JG (1992) The phylogeny of Ictalurid catfishes: A synthesis of recent work. In: Systematics, Historical Ecology, and North American Freshwater Fishes (ed. Mayden RL), pp. 392-420. Stanford University Press, Stanford, CA.
16. Martin AP, Naylor GJP, Palumbi SR (1992) Rates of mitochondrial DNA evolution in sharks are slow compared with mammals. Nature, 357, 153-155.
17. Martin AP, Palumbi SR (1993) Body size, metabolic rate, generation time, and the molecular clock. Proceedings of the National Academy of Sciences USA, 90, 4097-4091.
18. Mayden RL (1988) Vicariance biogeography, parsimony, and evolution in North American freshwater fishes. Systematic Zoology, 37, 329-355.
19. Mayden RL, Burr BM (1981) Life history of the slender madtom, Noturus exilis, in southern Illinois (Pisces: Ictaluridae). Occasional Papers of the Museum of Natural History of the University of Kansas, 93, 1-64.
20. McAllister DE, Platania SP, Schueler FW, Baldwin ME, Lee DS (1986) Ichthyofaunal patterns on a geographic grid. In: Zoogeography of North America Freshwater Fishes (eds Hocutt CH, Wiley EO), pp. 17-52. John Wiley & Sons, New York, NY.
21. Moore WS (1995) Inferring phylogenies from mtDNA variation: Mitochondrial-gene trees versus nuclear-gene trees. Evolution, 49, 718-726.
22. Nickerson MA (1980) Return of captive hellbenders, Cryptobranchus alleganiensis bishopi, to site of capture. Copeia, 1980, 536-537.
23. Nickerson MA, Mays CE (1973) The hellbenders: North American 'giant salamanders'. Milwaukee Public Museum. Publications in Biology and Geology, 1, 1-106.
24. Page LM, Burr BM (1991) A Guide to Freshwater Fishes. Houghton Mifflin Company, Boston, MA.
25. Pflieger WL (1975) Fishes of Missouri. Missouri Department of Conservation, Missouri.
26. Pflieger WL (1989) Aquatic community classification system for Missouri. Aquatic Series no. 19, pp. 1-69. Missouri Department of Conservation, Missouri.
27. Rand DM (1994) Thermal habit, metabolic rate and the evolution of mitochondrial DNA. Trends in Ecology and Evolution, 9, 125-131.
28. Ronquist F (1997) Dispersal-vicariance analysis: A new approach to the quantification of historical biogeography. Systematic Biology, 46, 195-203.
29. Routman ER (1990) Paedomorphosis and Population Structure in the Salamanders Cryptobranchus Alleganiensis and Ambystoma Tigrinum. Washington University, Washington, DC.
30. Routman EJ (1993) Mitochondrial DNA variation in Cryptobranchus alleganiensis, a salamander with extremely low allozyme diversity. Copeia, 1993, 375-384.
31. Routman ER, Wu R, Templeton AR (1994) Parsimony, molecular evolution, and biogeography: The case of the North American giant salamander. Evolution, 48, 1799-1809.
32. Russo CAM, Takezaki N, Nei M (1996) Efficiencies of different genes and different tree-building methods in recovering a known vertebrate phylogeny. Molecular Biology and Evolution, 13, 525-536.
33. Schneider S, Roessli D, Excoffier L (2000) Arlequin: A Software for Population Genetics Data Analysis. Genetics and Biometry Laboratory, Department of Anthropology, University of Geneva, Geneva, Switzerland.
34. Shimodaira H, Hasegawa M (1999) Multiple comparisons of log-likelihoods with applications to phylogenetic inference. Molecular Biological Evology, 16, 1114-1116.
35. Strange RM, Burr BM (1997) Intraspecific phylogeography of North American highland fishes: A test of the Pleistocene vicariance hypothesis. Evolution, 51, 885-897.
36. Swofford DL (2000) PAUP* Phylogenetic Analysis Using Parsimony (*and Other Methods). Sinauer Associates, Sunderland, MA.
37. Taylor WR (1969) A revision of the catfish genus Noturus Rafinesque, with an analysis of higher groups in the Ictaluridae. Bulletin of the United States Natural Museum, 282, pp. 1-315.
38. Templeton AR, Routman E, Phillips CA (1995) Separating population structure from population history: A cladistic analysis of the geographical distribution of mitochondrial DNA haplotypes in the tiger salamander, Ambystoma tigrinum. Genetics, 140, 767-782.
39. Turner TF, Trexler JC, Kuhn DN, Robison HW (1996) Life-history variation and comparative phylogeography of darters (Pisces: Percidae) from the North American Central Highlands. Evolution, 50, 2023-2036.
40. Weir BS, Cockerham CC (1984) Estimating F-statistics for the analysis of population structure. Evolution, 38, 1358-1370.
41. Wiley EO, Mayden RL (1985) Species and speciation in phylogenetic systematics, with examples from the North American fish fauna. Annals of the Missouri Botanical Garden, 72, 596-635.