-
1
-
-
0027263427
-
Biodegradation of polycyclic aromatic hydrocarbons
-
Cerniglia CE. 1993. Biodegradation of polycyclic aromatic hydrocarbons. Curr Opin Biotechnol 4:331-338.
-
(1993)
Curr Opin Biotechnol
, vol.4
, pp. 331-338
-
-
Cerniglia, C.E.1
-
2
-
-
17644365496
-
Polycyclic aromatic hydrocarbons: A structure-based study
-
Wammer KH, Peters CA. 2005. Polycyclic aromatic hydrocarbons: A structure-based study. Environ Sci Technol 39:2571-2578.
-
(2005)
Environ Sci Technol
, vol.39
, pp. 2571-2578
-
-
Wammer, K.H.1
Peters, C.A.2
-
3
-
-
0038780629
-
Aqueous phase biodegradation kinetics of ten PAHs
-
Knightes CD, Peters CA. 2003. Aqueous phase biodegradation kinetics of ten PAHs. Environ Eng Sci 20:207-218.
-
(2003)
Environ Eng Sci
, vol.20
, pp. 207-218
-
-
Knightes, C.D.1
Peters, C.A.2
-
4
-
-
0034029015
-
Aromatic hydrocarbon dioxygenases in environmental biotechnology
-
Gibson DT, Parales RE. 2000. Aromatic hydrocarbon dioxygenases in environmental biotechnology. Curr Opin Biotechnol 11: 236-243.
-
(2000)
Curr Opin Biotechnol
, vol.11
, pp. 236-243
-
-
Gibson, D.T.1
Parales, R.E.2
-
5
-
-
0032524127
-
Structure of an aromatic-ring-hydroxylating dioxygenase: Naphthalene 1,2-dioxygenase
-
Kauppi B, Lee K, Carredano E, Parales RE, Gibson DT, Eklund H, Ramaswamy S. 1998. Structure of an aromatic-ring-hydroxylating dioxygenase: Naphthalene 1,2-dioxygenase. Structure 6: 571-586.
-
(1998)
Structure
, vol.6
, pp. 571-586
-
-
Kauppi, B.1
Lee, K.2
Carredano, E.3
Parales, R.E.4
Gibson, D.T.5
Eklund, H.6
Ramaswamy, S.7
-
6
-
-
0034554794
-
Novel forms of ring-hydroxylating dioxygenases are widespread in pristine and contaminated soils
-
Yeates C, Holmes AJ, Gillings MR. 2000. Novel forms of ring-hydroxylating dioxygenases are widespread in pristine and contaminated soils. Environ Microbiol 2:644-653.
-
(2000)
Environ Microbiol
, vol.2
, pp. 644-653
-
-
Yeates, C.1
Holmes, A.J.2
Gillings, M.R.3
-
7
-
-
0016612680
-
Initial reactions in oxidation of naphthalene by Pseudomonas putida
-
Jeffrey AM, Yeh HJC, Jerina DM, Patel TR, Davey JF, Gibson DT. 1975. Initial reactions in oxidation of naphthalene by Pseudomonas putida. Biochemistry 14:575-584.
-
(1975)
Biochemistry
, vol.14
, pp. 575-584
-
-
Jeffrey, A.M.1
Yeh, H.J.C.2
Jerina, D.M.3
Patel, T.R.4
Davey, J.F.5
Gibson, D.T.6
-
8
-
-
0014974950
-
cis-1,2-Dihydroxy-1,2- dihydronaphthalene -Bacterial metabolite from naphthalene
-
Jerina DM, Daly JW, Jeffrey AM, Gibson DT. 1971. cis-1,2-Dihydroxy-1,2- dihydronaphthalene -Bacterial metabolite from naphthalene. Arch Biochem Biophys 142:394-396.
-
(1971)
Arch Biochem Biophys
, vol.142
, pp. 394-396
-
-
Jerina, D.M.1
Daly, J.W.2
Jeffrey, A.M.3
Gibson, D.T.4
-
9
-
-
0029842912
-
Regio- and stereospecific oxidation of fluorene, dibenzofuran, and dibenzothiophene by naphthalene dioxygenase from Pseudomonas sp. strain NCIB 9816-4
-
Resnick SM, Gibson DT. 1996. Regio- and stereospecific oxidation of fluorene, dibenzofuran, and dibenzothiophene by naphthalene dioxygenase from Pseudomonas sp. strain NCIB 9816-4. Appl Environ Microbiol 62:4073-4080.
-
(1996)
Appl Environ Microbiol
, vol.62
, pp. 4073-4080
-
-
Resnick, S.M.1
Gibson, D.T.2
-
12
-
-
0033954256
-
The Protein Data Bank
-
Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE. 2000. The Protein Data Bank. Nucleic Acids Res 28:235-242.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, I.N.7
Bourne, P.E.8
-
13
-
-
0034681304
-
Substrate binding site of naphthalene 1,2-dioxygenase: Functional implications of indole binding
-
Carredano E, Karlsson A, Kauppi B, Choudhury D, Parales RE, Parales JV, Lee K, Gibson DT, Eklund H, Ramaswamy S. 2000. Substrate binding site of naphthalene 1,2-dioxygenase: Functional implications of indole binding. J Mol Biol 296:701-712.
-
(2000)
J Mol Biol
, vol.296
, pp. 701-712
-
-
Carredano, E.1
Karlsson, A.2
Kauppi, B.3
Choudhury, D.4
Parales, R.E.5
Parales, J.V.6
Lee, K.7
Gibson, D.T.8
Eklund, H.9
Ramaswamy, S.10
-
14
-
-
0347264753
-
Crystal structure of naphthalene dioxygenase: Side-on binding of dioxygen to iron
-
Karlsson A, Parales JV, Parales RE, Gibson DT, Eklund H, Ramaswamy S. 2003. Crystal structure of naphthalene dioxygenase: Side-on binding of dioxygen to iron. Science 299:1039-1042.
-
(2003)
Science
, vol.299
, pp. 1039-1042
-
-
Karlsson, A.1
Parales, J.V.2
Parales, R.E.3
Gibson, D.T.4
Eklund, H.5
Ramaswamy, S.6
-
16
-
-
0003447452
-
-
National Institute of Standards and Technology, Gaithersburg, MD, USA
-
Sander LC, Wise SA. 1997. Polycyclic Aromatic Hydrocarbon Structure Index, National Institute of Standards and Technology, Gaithersburg, MD, USA.
-
(1997)
Polycyclic Aromatic Hydrocarbon Structure Index
-
-
Sander, L.C.1
Wise, S.A.2
-
17
-
-
0019608840
-
A relationship between reversed phase C18 liquid chromatographic retention and the shape of polycyclic aromatic hydrocarbons
-
Wise SA, Bonnett WJ, Guenther FR, May WE. 1981. A relationship between reversed phase C18 liquid chromatographic retention and the shape of polycyclic aromatic hydrocarbons. J Chromatogr Sci 19:457-465.
-
(1981)
J Chromatogr Sci
, vol.19
, pp. 457-465
-
-
Wise, S.A.1
Bonnett, W.J.2
Guenther, F.R.3
May, W.E.4
-
18
-
-
0029560084
-
Bioconversion of substituted naphthalenes to the corresponding 1,2-dihydro-1,2-dihydroxy derivatives. Determination of the regio- and stereochemistry of the oxidation reactions
-
Bestetti G, Bianchi D, Bosetti A, DiGennaro P, Galli E, Leoni B, Pelizzoni F, Sello G. 1995. Bioconversion of substituted naphthalenes to the corresponding 1,2-dihydro-1,2-dihydroxy derivatives. Determination of the regio- and stereochemistry of the oxidation reactions. Appl Microbiol Biotechnol 44:306-313.
-
(1995)
Appl Microbiol Biotechnol
, vol.44
, pp. 306-313
-
-
Bestetti, G.1
Bianchi, D.2
Bosetti, A.3
DiGennaro, P.4
Galli, E.5
Leoni, B.6
Pelizzoni, F.7
Sello, G.8
-
19
-
-
0025060826
-
Microbial oxidation of naphthalene derivatives-Absolute configuration of metabolites
-
Deluca ME, Hudlicky T. 1990. Microbial oxidation of naphthalene derivatives-Absolute configuration of metabolites. Tetrahedron Lett 31:13-16.
-
(1990)
Tetrahedron Lett
, vol.31
, pp. 13-16
-
-
Deluca, M.E.1
Hudlicky, T.2
-
20
-
-
0000858913
-
Absolute stereochemistry of cis-1,2-dihydrodiol, trans-1,2-dihydrodiol, and cis-3,4-dihydrodiol metabolites of phenanthrene
-
Koreeda M, Akhtar MN, Boyd DR, Neill JD, Gibson DT, Jerina DM. 1978. Absolute stereochemistry of cis-1,2-dihydrodiol, trans-1,2-dihydrodiol, and cis-3,4-dihydrodiol metabolites of phenanthrene. J Org Chem 43:1023-1027.
-
(1978)
J Org Chem
, vol.43
, pp. 1023-1027
-
-
Koreeda, M.1
Akhtar, M.N.2
Boyd, D.R.3
Neill, J.D.4
Gibson, D.T.5
Jerina, D.M.6
-
21
-
-
0017307965
-
Dihydrodiols from anthracene and phenanthrene
-
Jerina DM, Selander H, Yagi H, Wells MC, Davey JF, Mahadevan V, Gibson DT. 1976. Dihydrodiols from anthracene and phenanthrene. J Am Chem Soc 98:5988-5996.
-
(1976)
J Am Chem Soc
, vol.98
, pp. 5988-5996
-
-
Jerina, D.M.1
Selander, H.2
Yagi, H.3
Wells, M.C.4
Davey, J.F.5
Mahadevan, V.6
Gibson, D.T.7
-
22
-
-
0030034501
-
Oxidation of naphthenoaromatic and methyl-substituted aromatic compounds by naphthalene 1,2-dioxygenase
-
Selifonov SA, Grifoll M, Eaton RW, Chapman PJ. 1996. Oxidation of naphthenoaromatic and methyl-substituted aromatic compounds by naphthalene 1,2-dioxygenase. Appl Environ Microbiol 62:507-514.
-
(1996)
Appl Environ Microbiol
, vol.62
, pp. 507-514
-
-
Selifonov, S.A.1
Grifoll, M.2
Eaton, R.W.3
Chapman, P.J.4
-
23
-
-
0029012851
-
Desaturation, dioxygenation, and monooxygenation reactions catalyzed by naphthalene dioxygenase from Pseudomonas sp. strain 9816-4
-
Gibson DT, Resnick SM, Lee K, Brand JM, Torok DS, Wackelt LP, Schocken MJ, Haigler BE. 1995. Desaturation, dioxygenation, and monooxygenation reactions catalyzed by naphthalene dioxygenase from Pseudomonas sp. strain 9816-4. J Bacteriol 177: 2615-2621.
-
(1995)
J Bacteriol
, vol.177
, pp. 2615-2621
-
-
Gibson, D.T.1
Resnick, S.M.2
Lee, K.3
Brand, J.M.4
Torok, D.S.5
Wackelt, L.P.6
Schocken, M.J.7
Haigler, B.E.8
-
24
-
-
0030895392
-
Stereospecific oxidation of (R)- and (S)-1-indanol by naphthalene dioxygenase from Pseudomonas sp. strain NCIB 9816-4
-
Lee K, Resnick SM, Gibson DT. 1997. Stereospecific oxidation of (R)- and (S)-1-indanol by naphthalene dioxygenase from Pseudomonas sp. strain NCIB 9816-4. Appl Environ Microbiol 63: 2067-2070.
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 2067-2070
-
-
Lee, K.1
Resnick, S.M.2
Gibson, D.T.3
-
25
-
-
0024295005
-
Benzylic monooxygenation catalyzed by toluene dioxygenase from Pseudomonas putida
-
Wackett LP, Kwart LD, Gibson DT. 1988. Benzylic monooxygenation catalyzed by toluene dioxygenase from Pseudomonas putida. Biochemistry 27:1360-1367.
-
(1988)
Biochemistry
, vol.27
, pp. 1360-1367
-
-
Wackett, L.P.1
Kwart, L.D.2
Gibson, D.T.3
-
26
-
-
0021210237
-
Bacterial oxidation of the polycyclic aromatic hydrocarbons acenaphthene and acenaphthylene
-
Schocken MJ, Gibson DT. 1984. Bacterial oxidation of the polycyclic aromatic hydrocarbons acenaphthene and acenaphthylene. Appl Environ Microbiol 48:10-16.
-
(1984)
Appl Environ Microbiol
, vol.48
, pp. 10-16
-
-
Schocken, M.J.1
Gibson, D.T.2
-
27
-
-
0031833978
-
Oxidation of methyl-substituted naphthalenes: Pathways in a versatile Sphingomonas paucimobilis strain
-
Dutta TK, Selifonov SA, Gunsalus IC. 1998. Oxidation of methyl-substituted naphthalenes: Pathways in a versatile Sphingomonas paucimobilis strain. Appl Environ Microbiol 64:1884-1889.
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 1884-1889
-
-
Dutta, T.K.1
Selifonov, S.A.2
Gunsalus, I.C.3
-
28
-
-
0028363186
-
Evidence for the involvement of multiple pathways in the biodegradation of 1-methylnaphthalene and 2-methylnaphthalene by Pseudomonas putida Csvs6
-
Mahajan MC, Phale PS, Vaidyanathan CS. 1994. Evidence for the involvement of multiple pathways in the biodegradation of 1-methylnaphthalene and 2-methylnaphthalene by Pseudomonas putida Csvs6. Arch Microbiol 161:425-433.
-
(1994)
Arch Microbiol
, vol.161
, pp. 425-433
-
-
Mahajan, M.C.1
Phale, P.S.2
Vaidyanathan, C.S.3
-
30
-
-
0027484182
-
Dibenzofuran 4,4-α-dioxygenase from Sphingomonas sp. strain Rw1-Angular dioxygenation by a three-component enzyme system
-
Bunz PV, Cook AM. 1993. Dibenzofuran 4,4-α-dioxygenase from Sphingomonas sp. strain Rw1-Angular dioxygenation by a three-component enzyme system. J Bacteriol 175:6467-6475.
-
(1993)
J Bacteriol
, vol.175
, pp. 6467-6475
-
-
Bunz, P.V.1
Cook, A.M.2
-
31
-
-
0032989253
-
Aspartate 205 in the catalytic domain of naphthalene dioxygenase is essential for activity
-
Parales RE, Parales JV, Gibson DT. 1999. Aspartate 205 in the catalytic domain of naphthalene dioxygenase is essential for activity. J Bacteriol 181:1831-1837.
-
(1999)
J Bacteriol
, vol.181
, pp. 1831-1837
-
-
Parales, R.E.1
Parales, J.V.2
Gibson, D.T.3
-
32
-
-
0034051818
-
Substrate specificity of naphthalene dioxygenase: Effect of specific amino acids at the active site of the enzyme
-
Parales RE, Lee K, Resnick SM, Jiang HY, Lessner DJ, Gibson DT. 2000. Substrate specificity of naphthalene dioxygenase: Effect of specific amino acids at the active site of the enzyme. J Bacteriol 182:1641-1649.
-
(2000)
J Bacteriol
, vol.182
, pp. 1641-1649
-
-
Parales, R.E.1
Lee, K.2
Resnick, S.M.3
Jiang, H.Y.4
Lessner, D.J.5
Gibson, D.T.6
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