Phylogeny of Northern Hemisphere freshwater crayfishes based on 16S rRNA gene analysis

Korean Journal of Genetics

Volumn 28, Issue 2, 2006, Pages 185-192

  Ahn, Dong Ha ^a   Kawai, Tadashi ^b   Kim, Se Joo ^a   Rho, Hyun Soo ^c   Jung, Jong Woo ^c   Kim, Won ^c   Lim, Byung Jin ^a   Kim, Min Seop ^a   Min, Gi Sik ^a  

^a Inha University   (South Korea)

^b Hokkaido Nucl Ener Environ R   (Japan)

^c Seoul National University   (South Korea)

Author keywords

16s rDNA; Cambaroides; Northern Hemisphere crayfish; Phylogeny

Indexed keywords

ANIMALIA; ASTACIDAE; ASTACOIDEA; CAMBARIDAE; CAMBAROIDES; PARASTACOIDEA;

EID: 33746635986     PISSN: 02545934     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (31)

1. Crandall KA and Fitzpatrick JF Jr (1996) Crayfish molecular systematics: using a combination of procedures to estimate phylogeny. Syst. Biol. 45: 1-26.
2. Crandall KA, Fetzner JW Jr, Jara CG and Buckup L (2000) On the phylogenetic positioning of the South American freshwater crayfish genera (Decapoda: Parastacidae). J. Crust. Biol. 20: 530-540.
3. Crandall KA, Fetzner JW Jr, Lawler SH, Kinnersley M and Austin CM (1999) Phylogenetic relationships among the Australian and New Zealand genera of freshwater crayfishes (Decapoda: Parastacidae). Aust. J. Zool. 47: 199-214.
4. Crandall KA, Harris DJ and Fetzner JW Jr (2000) The monophyletic origin of freshwater crayfish estimated from nuclear and mitochondrial DNA sequences. Proc. R. Soc. Lond. 267: 1679-1686.
5. Cukerzis JM (1988) On the origin of freshwater crayfish (Astacura). Freshwater Crayfish 7: 343-349.
6. Enghoff H (1995) Historical biogeography of the Holarctic: area relationships, ancestral areas, and dispersal of non-marine animals. Cladistics 11: 223-263.
7. Felsenstein J (1981) Evolutionary trees from DNA sequences: a maximum likelihood approach. J. Mol. Evol. 17: 368-376.
8. Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791.
9. Fitch WM (1971) Towards defining the course of evolution: minimum change for a specific tree topology. Syst. Zool. 20: 406-416.
10. Grandjean F, Harris DJ, Souty-Grosset C and Grandjean KA (2000) Systematics of the European endangered crayfish species Austropotamobius pallipes (Decapoda: Astacidae). J. Crust. Biol. 20: 522-529.
11. Hobbs HH Jr (1974) Synopsis of the families and genera of crayfishes Crustacea: Decapoda. Smith. Contr. Zool. 164: 1-32.
12. Hobbs HH Jr (1988) Crayfish distribution, adaptive radiation and evolution. In Freshwater crayfish: biology, management and exploitation, D.M. Holdich and R.S. Lowery, eds., Timber press, Portland, pp. 52-82.
13. Jung S-O, Kum BG, Yoon YD and Lee J-S (2006) Complete mitochondrial genome of the Korean fire-bellied frog Bomina orientalis from Korea (Anura, Bombinatoridae) and difference between biogeographically different individual from China. Korean J. Genet. 28: 17-26.
14. Kawai T and Saito K (1998) Taxonomic implication of the "form" and further morphological characters for the crayfish genus Cambaroides (Cambaridae). In Freshwater Crayfish 12, M. Keller, M.M. Keller, B. Oidtman, R. Hoffmann and G. Vogt, eds., International Association of Astacology, Augsburg, Germany, pp. 82-89.
15. Kimura M (1980) A simple method for estimating evolutionary rates of base substitution through comparative studies of nucleotide sequences. J. Mol. Evol. 16: 111-120.
16. Ko HS and Kawai T (2001) Postembryonic development of the Korean crayfish, Cambaroides similes (Decapoda, Cambaridae) reared in the laboratory. Korean J. Syst. Zool. 17: 35-47.
17. Lee J-S (2003) cDNA cloning of rhoA gene from the intertidal harpacticoid copepod Tigropus japonicus (Crustacea, Copepoda). Korean J. Genet. 25: 403-408.
18. Lodge DM, Taylor CA, Holdich DM and Skurdal M (2000) Nonindigenous crayfishes threaten North American freshwater biodiversity: lessons from Europe. Fisheries 25: 7-20.
19. Munasinghe DHN, Burridge CP and Austin CM (2004) Molecular phylogeny and zoogeography of the freshwater crayfish genus Cherax Erichson (Decapoda: Parastacidae) in Australia. Biol. J. Linn. Soc. London 81: 553-563.
20. Ortmann AE (1902) The geographical distribution of freshwater decapods and its bearing upon ancient geography. Proc. Am. Phil. Soc. 41: 267-400.
21. Posada D and Crandall KA (1998) Modeltest: testing the model of DNA substitution. Bioinformatics 14: 817-818.
22. Qiu YL, Chase MW and Parks CR (1995) A chloroplast DNA phylogenetic study of the eastern Asia-eastern North America disjuct section Rytidospermum of Magnolia (Magnoliaceae). American J. Botany 82: 1582-1588.
23. Saitou N and Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425.
24. Scholtz G (2002) Phylogeny and Evolution. In Biology of freshwater crayfish, D.M. Holdich, ed., Blackwell Science, London, pp. 30-52.
25. Scholtz G and Richter S (1995) Phylogenetic systematics of the reptantian Decapoda (Crustacea, Malacostraca). Zool. J. Linn. Soc. 113: 289-328.
26. Swofford DL (2003) PAUP, Phylogenetic analysis using parsimony, and other Methods, ver. 4.0 (Software). Sinauer Associates, Sunderland, MA.
27. Thompson JD, Gibson TJ, Plewniak DE, Jeanmougin F and Higgins DG (1997) The CLUSTAL X-windows interface: flexible strategies for multiple sequence alignment aided by quality analysis. Nucleic Acids Res. 25: 4876-4882.
28. Tiffney B and Manchester S (2001) The use of geological and paleontological evidence in evaluating plant phylogeographic hypotheses in the Northern Hemisphere tertiary. Int. J. Plant Sci. 162 (Suppl.): S3-S17.
29. Villalobos A (1983) Crayfishes of Mexico (Crustacea: Decapoda). Amerind Publishing Co., New Dhli, 276pp. (translated from Spanish)
30. Wen J (1998) Evolution of the eastern Asian and eastern North American disjuct pattern: insights from phylogenetic studies. Kor. J. Plant Tax. 28: 63-81.
31. Wen J, Shi S, Jansen RK and Zimmer EA (1998) Phylogeny and biogeography of Aralia sect. Aralia (Araliaceae). American J. Botany 85: 866-875.