-
1
-
-
10644271631
-
Archaeal genetics-the third way
-
Allers T., and Mevarech M. Archaeal genetics-the third way. Nat. Genet. 6 (2005) 58-73
-
(2005)
Nat. Genet.
, vol.6
, pp. 58-73
-
-
Allers, T.1
Mevarech, M.2
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
Altschul S.F., Madden T.L., Schaffer A.A., Zhang J., Zhang Z., Miller W., and Lipman D.J. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25 (1997) 3389-3402
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
0032828523
-
The genetic elements pSSVx of the extremely thermophilic crenarchaeon Sulfolobus is a hybrid between a plasmid and a virus
-
Arnold H.-P., She Q., Phan H., Stedman K., Prangishvili D., Holz I., Kristjansson J.K., Garrett R., and Zillig W. The genetic elements pSSVx of the extremely thermophilic crenarchaeon Sulfolobus is a hybrid between a plasmid and a virus. Mol. Microbiol. 34 (1999) 217-226
-
(1999)
Mol. Microbiol.
, vol.34
, pp. 217-226
-
-
Arnold, H.-P.1
She, Q.2
Phan, H.3
Stedman, K.4
Prangishvili, D.5
Holz, I.6
Kristjansson, J.K.7
Garrett, R.8
Zillig, W.9
-
4
-
-
0037494948
-
Characterization and functional complementation of a nonlethal deletion in the chromosome of a β-glycosidase mutant of Sulfolobus solfataricus
-
Bartolucci S., Rossi M., and Cannio R. Characterization and functional complementation of a nonlethal deletion in the chromosome of a β-glycosidase mutant of Sulfolobus solfataricus. J. Bacteriol. 185 (2003) 3948-3957
-
(2003)
J. Bacteriol.
, vol.185
, pp. 3948-3957
-
-
Bartolucci, S.1
Rossi, M.2
Cannio, R.3
-
6
-
-
0021770951
-
Characterization of a halobacterial gene affecting bacterio-opsin gene expression
-
Beltach M., Friedman J., Boyer H.W., and Pfeifer F. Characterization of a halobacterial gene affecting bacterio-opsin gene expression. Nucleic Acids Res. 12 (1984) 7949-7959
-
(1984)
Nucleic Acids Res.
, vol.12
, pp. 7949-7959
-
-
Beltach, M.1
Friedman, J.2
Boyer, H.W.3
Pfeifer, F.4
-
7
-
-
0018800089
-
A rapid alkaline extraction procedure for screening recombinant plasmid DNA
-
Birnboim H.C., and Doly J. A rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nucleic Acids Res. 7 (1979) 1513-1523
-
(1979)
Nucleic Acids Res.
, vol.7
, pp. 1513-1523
-
-
Birnboim, H.C.1
Doly, J.2
-
8
-
-
0031747102
-
An autonomously replicating transforming vector for Sulfolobus solfataricus
-
Cannio R., Contursi P., Rossi M., and Bartolucci S. An autonomously replicating transforming vector for Sulfolobus solfataricus. J. Bacteriol. 180 (1998) 3237-3240
-
(1998)
J. Bacteriol.
, vol.180
, pp. 3237-3240
-
-
Cannio, R.1
Contursi, P.2
Rossi, M.3
Bartolucci, S.4
-
10
-
-
0024297354
-
Multiple sequence alignment with hierarchical clustering
-
Corpet F. Multiple sequence alignment with hierarchical clustering. Nucleic Acids Res. 16 (1988) 10881-10890
-
(1988)
Nucleic Acids Res.
, vol.16
, pp. 10881-10890
-
-
Corpet, F.1
-
11
-
-
0026502191
-
The copy number of plasmid pLS1 is regulated by two trans-acting plasmid products: the antisense RNA II and the repressor protein, RepA
-
del Solar G., and Espinosa M. The copy number of plasmid pLS1 is regulated by two trans-acting plasmid products: the antisense RNA II and the repressor protein, RepA. Mol. Microbiol. 6 (1992) 83-94
-
(1992)
Mol. Microbiol.
, vol.6
, pp. 83-94
-
-
del Solar, G.1
Espinosa, M.2
-
12
-
-
0033859844
-
Plamid copy number control: an ever-growing story
-
del Solar G., and Espinosa M. Plamid copy number control: an ever-growing story. Mol. Microbiol. 37 (2000) 492-500
-
(2000)
Mol. Microbiol.
, vol.37
, pp. 492-500
-
-
del Solar, G.1
Espinosa, M.2
-
13
-
-
0029873327
-
16S rDNA-based phylogeny of the archaeal order Sulfolobales and reclassification of Desulforolobus ambivalens as Acidianus ambivalens comb. nov
-
Fuchs T., Huber H., Burggraf S., and Stetter K.O. 16S rDNA-based phylogeny of the archaeal order Sulfolobales and reclassification of Desulforolobus ambivalens as Acidianus ambivalens comb. nov. Syst. Appl. Microbiol. 19 (1996) 56-60
-
(1996)
Syst. Appl. Microbiol.
, vol.19
, pp. 56-60
-
-
Fuchs, T.1
Huber, H.2
Burggraf, S.3
Stetter, K.O.4
-
14
-
-
0025261685
-
A new superfamily of putative NTP-binding domains encoded by genomes of small DNA and RNA viruses
-
Gorbalenya A.E., Koonin E.V., and Wolf Y.I. A new superfamily of putative NTP-binding domains encoded by genomes of small DNA and RNA viruses. FEBS Lett. 262 (1990) 145-148
-
(1990)
FEBS Lett.
, vol.262
, pp. 145-148
-
-
Gorbalenya, A.E.1
Koonin, E.V.2
Wolf, Y.I.3
-
15
-
-
8744225606
-
Genomic comparison of archaeal conjugative plasmids from Sulfolobus
-
Greve B., Jensen S., Brugger K., Zillig W., and Garrett R.A. Genomic comparison of archaeal conjugative plasmids from Sulfolobus. Archaea 1 (2004) 231-239
-
(2004)
Archaea
, vol.1
, pp. 231-239
-
-
Greve, B.1
Jensen, S.2
Brugger, K.3
Zillig, W.4
Garrett, R.A.5
-
16
-
-
20144366619
-
Novel RepA-MCM proteins encoded in plasmids pTAU4, pORA1, and pTIK4 from Sulfolobus neozealandicus
-
Greve B., Jensen S., Phan H., Brugger K., Zillig W., She Q., and Garrett R.A. Novel RepA-MCM proteins encoded in plasmids pTAU4, pORA1, and pTIK4 from Sulfolobus neozealandicus. Archaea 1 (2004) 319-325
-
(2004)
Archaea
, vol.1
, pp. 319-325
-
-
Greve, B.1
Jensen, S.2
Phan, H.3
Brugger, K.4
Zillig, W.5
She, Q.6
Garrett, R.A.7
-
17
-
-
0024351039
-
Phenotypic characterisation of the archaeabacterial genus Sulfolobus: comparison of five wild-type strains
-
Grogan D.W. Phenotypic characterisation of the archaeabacterial genus Sulfolobus: comparison of five wild-type strains. J. Bacteriol. 171 (1989) 6710-6719
-
(1989)
J. Bacteriol.
, vol.171
, pp. 6710-6719
-
-
Grogan, D.W.1
-
18
-
-
0026458378
-
Amino acid substitution matrices from proteins blocks
-
Henikoff S., and Henikoff J.G. Amino acid substitution matrices from proteins blocks. Proc. Natl. Acad. Sci. USA 89 (1992) 10915-10919
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 10915-10919
-
-
Henikoff, S.1
Henikoff, J.G.2
-
19
-
-
0026704305
-
Organization and evolution of bacterial and bacteriophage primase-helicase systems
-
Ilyina T.V., Gorbalenya A.E., and Koonin E.V. Organization and evolution of bacterial and bacteriophage primase-helicase systems. J. Mol. Evol. 34 (1992) 351-357
-
(1992)
J. Mol. Evol.
, vol.34
, pp. 351-357
-
-
Ilyina, T.V.1
Gorbalenya, A.E.2
Koonin, E.V.3
-
20
-
-
0003123750
-
Eubacterial, archaebacterial, and eucariotic genes that encode leaderless mRNA
-
Baltz R.H., Hegeman G.D., and Skatrud P.L. (Eds), American Society for Microbiology, Washington, DC
-
Janssen G.R. Eubacterial, archaebacterial, and eucariotic genes that encode leaderless mRNA. In: Baltz R.H., Hegeman G.D., and Skatrud P.L. (Eds). Industrial Microrganisms: Basic and Applied Molecular Genetics (1993), American Society for Microbiology, Washington, DC
-
(1993)
Industrial Microrganisms: Basic and Applied Molecular Genetics
-
-
Janssen, G.R.1
-
21
-
-
0029873194
-
Complete nucleotide sequence of the Sulfolobus islandicus multicopy plasmid pRN1
-
Keeling P.J., Klenk H.-P., Singh R.K., Feeley O., Schleper C., Zillig W., Doolittle W.F., and Sensen C.W. Complete nucleotide sequence of the Sulfolobus islandicus multicopy plasmid pRN1. Plasmid 35 (1996) 141-144
-
(1996)
Plasmid
, vol.35
, pp. 141-144
-
-
Keeling, P.J.1
Klenk, H.-P.2
Singh, R.K.3
Feeley, O.4
Schleper, C.5
Zillig, W.6
Doolittle, W.F.7
Sensen, C.W.8
-
22
-
-
0032211967
-
Sulfolobus islandicus plasmids pRN1 and pRN2 share distant but common evolutionary ancestry
-
Keeling P.J., Klenk H.-P., Singh R.K., Schenk M.E., Sensen C.W., and Zillig W. Sulfolobus islandicus plasmids pRN1 and pRN2 share distant but common evolutionary ancestry. Extremophiles 2 (1998) 391-393
-
(1998)
Extremophiles
, vol.2
, pp. 391-393
-
-
Keeling, P.J.1
Klenk, H.-P.2
Singh, R.K.3
Schenk, M.E.4
Sensen, C.W.5
Zillig, W.6
-
23
-
-
0027181280
-
Nucleotide sequence, transcription, and phylogeny of the gene encoding the superoxide dismutase of Sulfolobus acidocaldarius
-
Klenk H.-P., Schleper C., Schwass V., and Zillig W. Nucleotide sequence, transcription, and phylogeny of the gene encoding the superoxide dismutase of Sulfolobus acidocaldarius. Biochim. Biophys. Acta 1174 (1993) 95-98
-
(1993)
Biochim. Biophys. Acta
, vol.1174
, pp. 95-98
-
-
Klenk, H.-P.1
Schleper, C.2
Schwass, V.3
Zillig, W.4
-
24
-
-
0345151827
-
Molecular analysis of pDL10 from Acidianus ambivalens reveals a family of related plasmids from extremely thermophilic and acidophilic archaea
-
Kletzin A., Lieke A., Urich T., Charlebois R.L., and Sensen C.W. Molecular analysis of pDL10 from Acidianus ambivalens reveals a family of related plasmids from extremely thermophilic and acidophilic archaea. Genetics 152 (1999) 1307-1314
-
(1999)
Genetics
, vol.152
, pp. 1307-1314
-
-
Kletzin, A.1
Lieke, A.2
Urich, T.3
Charlebois, R.L.4
Sensen, C.W.5
-
25
-
-
0028070460
-
Regulation of plasmid pE194 replication: control of cop-repF operon transcription by Cop and of repF translation by countertranscript RNA
-
Kwak J.H., and Weisblum B. Regulation of plasmid pE194 replication: control of cop-repF operon transcription by Cop and of repF translation by countertranscript RNA. J. Bacteriol. 176 (1994) 5044-5051
-
(1994)
J. Bacteriol.
, vol.176
, pp. 5044-5051
-
-
Kwak, J.H.1
Weisblum, B.2
-
26
-
-
0035865841
-
Thermostable and site-specific DNA binding of the gene product ORF56 from the Sulfolobus islandicus plasmid pRN1, a putative archaeal plasmid copy control protein
-
Lipps G., Stegert M., and Krauss G.A. Thermostable and site-specific DNA binding of the gene product ORF56 from the Sulfolobus islandicus plasmid pRN1, a putative archaeal plasmid copy control protein. Nucleic Acids Res. 29 (2001) 904-913
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 904-913
-
-
Lipps, G.1
Stegert, M.2
Krauss, G.A.3
-
27
-
-
0035945233
-
The protein ORF80 from the acidophilic and thermophilic archaeon Sulfolobus islandicus binds highly site-specifically to double-stranded DNA and represents a novel type of basic leucine zipper protein
-
Lipps G., Ibanez P., Stroessenreuther T., Hekimian K., and Krauss G.A. The protein ORF80 from the acidophilic and thermophilic archaeon Sulfolobus islandicus binds highly site-specifically to double-stranded DNA and represents a novel type of basic leucine zipper protein. Nucleic Acids Res. 29 (2001) 4973-4982
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 4973-4982
-
-
Lipps, G.1
Ibanez, P.2
Stroessenreuther, T.3
Hekimian, K.4
Krauss, G.A.5
-
28
-
-
0038577149
-
A novel type of replicative enzyme harbouring ATPase, primase and DNA polymerase activity
-
Lipps G., Rother S., Hartl C., and Krauss G.A. A novel type of replicative enzyme harbouring ATPase, primase and DNA polymerase activity. EMBO J. 22 (2003) 2516-2535
-
(2003)
EMBO J.
, vol.22
, pp. 2516-2535
-
-
Lipps, G.1
Rother, S.2
Hartl, C.3
Krauss, G.A.4
-
29
-
-
2342466121
-
The replication protein of the Sulfolobus islandicus plasmid pRN1
-
Lipps G. The replication protein of the Sulfolobus islandicus plasmid pRN1. Biochem. Soc. Trans. 32 (2004) 240-243
-
(2004)
Biochem. Soc. Trans.
, vol.32
, pp. 240-243
-
-
Lipps, G.1
-
30
-
-
0742305294
-
Structure of a bifunctional DNA primase-polymerase
-
Lipps G., Weinzierl A.O., von Scheven G., Buchen C., and Cramer P. Structure of a bifunctional DNA primase-polymerase. Nat. Struct. Biol. 11 (2004) 157-162
-
(2004)
Nat. Struct. Biol.
, vol.11
, pp. 157-162
-
-
Lipps, G.1
Weinzierl, A.O.2
von Scheven, G.3
Buchen, C.4
Cramer, P.5
-
31
-
-
0035122633
-
Comparative sequence analysis of plasmids pME2001 and pME2200 of methanothermobacter marburgensis strains Marburg and ZH3
-
Luo Y., Leisinger T., and Wasserfallen A. Comparative sequence analysis of plasmids pME2001 and pME2200 of methanothermobacter marburgensis strains Marburg and ZH3. Plasmid 45 (2001) 18-30
-
(2001)
Plasmid
, vol.45
, pp. 18-30
-
-
Luo, Y.1
Leisinger, T.2
Wasserfallen, A.3
-
32
-
-
0034602365
-
Evolution of the family of pRN plasmids and their integrase-mediated insertion into the chromosome of the crenarchaeon Sulfolobus solfataricus
-
Peng X., Holz I., Zillig W., Garrett R.A., and She Q. Evolution of the family of pRN plasmids and their integrase-mediated insertion into the chromosome of the crenarchaeon Sulfolobus solfataricus. J. Mol. Biol. 303 (2000) 449-454
-
(2000)
J. Mol. Biol.
, vol.303
, pp. 449-454
-
-
Peng, X.1
Holz, I.2
Zillig, W.3
Garrett, R.A.4
She, Q.5
-
34
-
-
0029128732
-
The particle SSV1 from the extremely thermophilic archaeon Sulfolobus effects its transfer to recipients by mating
-
Schleper C., Kubo K., and Zillig W. The particle SSV1 from the extremely thermophilic archaeon Sulfolobus effects its transfer to recipients by mating. J. Bacteriol. 177 (1992) 4417-4426
-
(1992)
J. Bacteriol.
, vol.177
, pp. 4417-4426
-
-
Schleper, C.1
Kubo, K.2
Zillig, W.3
-
35
-
-
10144228402
-
Organizational characteristics and information content of an archaeal genome:156 kb of sequence from Sulfolobus solfataricus P2
-
Sensen C.W., Klenk H.-P., Singh R.K., Allard G., Chan C.C., Liu Q.Y., Penny S.L., Young F., Schenk M.E., Gaasterland T., Doolittle W.F., Ragan M.A., and Charlebois R.L. Organizational characteristics and information content of an archaeal genome:156 kb of sequence from Sulfolobus solfataricus P2. Mol. Microbiol. 22 (1996) 175-191
-
(1996)
Mol. Microbiol.
, vol.22
, pp. 175-191
-
-
Sensen, C.W.1
Klenk, H.-P.2
Singh, R.K.3
Allard, G.4
Chan, C.C.5
Liu, Q.Y.6
Penny, S.L.7
Young, F.8
Schenk, M.E.9
Gaasterland, T.10
Doolittle, W.F.11
Ragan, M.A.12
Charlebois, R.L.13
-
36
-
-
0035367012
-
Leaderless transcripts of the crenarchaeal hyperthermophile Pyrobaculum aerophilum
-
Slupska M.M., King A.G., Fitz-Gibbon S., Besemer J., Borodovsky M., and Miller J.H. Leaderless transcripts of the crenarchaeal hyperthermophile Pyrobaculum aerophilum. J. Mol. Biol. 309 (2001) 347-360
-
(2001)
J. Mol. Biol.
, vol.309
, pp. 347-360
-
-
Slupska, M.M.1
King, A.G.2
Fitz-Gibbon, S.3
Besemer, J.4
Borodovsky, M.5
Miller, J.H.6
-
37
-
-
0033581011
-
DNA polymerases: structural diversity and common mechanisms
-
Steitz A.T. DNA polymerases: structural diversity and common mechanisms. J. Biol. Chem. 274 (1999) 17395-17398
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 17395-17398
-
-
Steitz, A.T.1
-
38
-
-
0034202785
-
Two different and highly organized mechanisms of translation initiation in the archaeon Sulfolobus solfataricus
-
Tolsturp N., Sensen C.W., Garrett R.A., and Groth-Clausen I. Two different and highly organized mechanisms of translation initiation in the archaeon Sulfolobus solfataricus. Extremophiles 4 (2000) 175-179
-
(2000)
Extremophiles
, vol.4
, pp. 175-179
-
-
Tolsturp, N.1
Sensen, C.W.2
Garrett, R.A.3
Groth-Clausen, I.4
-
40
-
-
0036229553
-
Characterization of plasmid pRT1 from Pyrococcus sp. strain JT1
-
Ward D.E., Revet I.M., Nandakumar R., Tuttle J.H., de Vos W.M., van der Oost J., and DiRuggiero J. Characterization of plasmid pRT1 from Pyrococcus sp. strain JT1. J. Bacteriol. 184 (2002) 2561-2566
-
(2002)
J. Bacteriol.
, vol.184
, pp. 2561-2566
-
-
Ward, D.E.1
Revet, I.M.2
Nandakumar, R.3
Tuttle, J.H.4
de Vos, W.M.5
van der Oost, J.6
DiRuggiero, J.7
-
41
-
-
0025300402
-
Towards a natural system of organisms: proposal for domains archaea, bacteria, and eucarya
-
Woese C.R., Kandler O., and Wheelis M.L. Towards a natural system of organisms: proposal for domains archaea, bacteria, and eucarya. Proc. Natl. Acad. Sci. USA 87 (1990) 4576-4579
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 4576-4579
-
-
Woese, C.R.1
Kandler, O.2
Wheelis, M.L.3
-
42
-
-
0021984005
-
Plasmid related anaerobic autotrophy of the novel archaebacterium Sulfolobus ambivalens
-
Zillig W., Yeats S., Holz I., Bock A., Gropp F., Rettenberger M., and Lutz S. Plasmid related anaerobic autotrophy of the novel archaebacterium Sulfolobus ambivalens. Nature 313 (1985) 789-791
-
(1985)
Nature
, vol.313
, pp. 789-791
-
-
Zillig, W.1
Yeats, S.2
Holz, I.3
Bock, A.4
Gropp, F.5
Rettenberger, M.6
Lutz, S.7
-
43
-
-
0029929098
-
Viruses, plasmids, and other genetic elements of thermophilic and hyperthermophilic archaea
-
Zillig W., Prangishvili D., Schleper C., Elferink M., Holz I., Albers S., Janekovic D., and Gotz D. Viruses, plasmids, and other genetic elements of thermophilic and hyperthermophilic archaea. FEMS Microbiol. Rev. 18 (1996) 225-236
-
(1996)
FEMS Microbiol. Rev.
, vol.18
, pp. 225-236
-
-
Zillig, W.1
Prangishvili, D.2
Schleper, C.3
Elferink, M.4
Holz, I.5
Albers, S.6
Janekovic, D.7
Gotz, D.8
-
44
-
-
18144447330
-
Genetic elements in the extremely thermophilic archaeon Sulfolobus
-
Zillig W., Arnold H.-P., Holz I., Prangishvili D., Schweier A., Stedman K., She Q., Phan H., Garrett R.A., and Kristjansson J.K. Genetic elements in the extremely thermophilic archaeon Sulfolobus. Extremophiles 2 (1998) 131-140
-
(1998)
Extremophiles
, vol.2
, pp. 131-140
-
-
Zillig, W.1
Arnold, H.-P.2
Holz, I.3
Prangishvili, D.4
Schweier, A.5
Stedman, K.6
She, Q.7
Phan, H.8
Garrett, R.A.9
Kristjansson, J.K.10
-
45
-
-
3943064227
-
Complete sequence and molecular characterization of pNB101, a rolling-circle replicating plasmid from the haloalkaliphilic archaeon Natronobacterium sp. strain AS7091
-
Zhou M., Xiang H., Sun C., Li Y., Liu J., and Tan H. Complete sequence and molecular characterization of pNB101, a rolling-circle replicating plasmid from the haloalkaliphilic archaeon Natronobacterium sp. strain AS7091. Extremophiles 8 (2004) 91-98
-
(2004)
Extremophiles
, vol.8
, pp. 91-98
-
-
Zhou, M.1
Xiang, H.2
Sun, C.3
Li, Y.4
Liu, J.5
Tan, H.6
|