메뉴 건너뛰기




Volumn 3, Issue 8, 2006, Pages 623-628

A comprehensive library of fluorescent transcriptional reporters for Escherichia coli

Author keywords

[No Author keywords available]

Indexed keywords

GLUCOSE; LACTOSE;

EID: 33746415885     PISSN: 15487091     EISSN: 15491676     Source Type: Journal    
DOI: 10.1038/nmeth895     Document Type: Article
Times cited : (593)

References (30)
  • 2
    • 84984932472 scopus 로고    scopus 로고
    • Exploring the new world of the genome with DNA microarrays
    • Brown, P.O. & Botstein, D. Exploring the new world of the genome with DNA microarrays. Nat. Genet. 21, 33-37 (1999).
    • (1999) Nat. Genet. , vol.21 , pp. 33-37
    • Brown, P.O.1    Botstein, D.2
  • 3
    • 5444251009 scopus 로고    scopus 로고
    • DNA microarrays: Experimental issues, data analysis, and application to bacterial systems
    • Dharmadi, Y. & Gonzalez, R. DNA microarrays: Experimental issues, data analysis, and application to bacterial systems. Biotechnol. Prog. 20, 1309-1324 (2004).
    • (2004) Biotechnol. Prog. , vol.20 , pp. 1309-1324
    • Dharmadi, Y.1    Gonzalez, R.2
  • 4
    • 0036051316 scopus 로고    scopus 로고
    • The dynamic microbe: Green fluorescent protein brings bacteria to light
    • Southward, C. & Surette, M.G. The dynamic microbe: Green fluorescent protein brings bacteria to light. Mol. Microbiol. 45, 1191-1196 (2002).
    • (2002) Mol. Microbiol. , vol.45 , pp. 1191-1196
    • Southward, C.1    Surette, M.G.2
  • 5
    • 0029973636 scopus 로고    scopus 로고
    • FACS-optimized mutants of the green fluorescent protein (GFP)
    • Cormack, B.P., Valdivia, R.H. & Falkow, S. FACS-optimized mutants of the green fluorescent protein (GFP). Gene 173, 33-38 (1996).
    • (1996) Gene , vol.173 , pp. 33-38
    • Cormack, B.P.1    Valdivia, R.H.2    Falkow, S.3
  • 6
    • 0036678794 scopus 로고    scopus 로고
    • Assigning numbers to the arrows: Parameterizing a gene regulation network by using accurate expression kinetics
    • Ronen, M., Rosenberg, R., Shraiman, B.I. & Alon, U. Assigning numbers to the arrows: Parameterizing a gene regulation network by using accurate expression kinetics. Proc. Natl. Acad. Sci. USA 99, 10555-10560 (2002).
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 10555-10560
    • Ronen, M.1    Rosenberg, R.2    Shraiman, B.I.3    Alon, U.4
  • 7
    • 22744432208 scopus 로고    scopus 로고
    • Precise temporal modulation in the response of the SOS DNA repair network in individual bacteria
    • Friedman, N., Vardi, S., Ronen, M., Alon, U. & Stavans, J. Precise temporal modulation in the response of the SOS DNA repair network in individual bacteria. PLoS Biol. 3, e238 (2005).
    • (2005) PLoS Biol. , vol.3
    • Friedman, N.1    Vardi, S.2    Ronen, M.3    Alon, U.4    Stavans, J.5
  • 8
    • 2442526837 scopus 로고    scopus 로고
    • Just-in-time transcription program in metabolic pathways
    • Zaslaver, A. et al. Just-in-time transcription program in metabolic pathways. Nat. Genet. 36, 486-491 (2004).
    • (2004) Nat. Genet. , vol.36 , pp. 486-491
    • Zaslaver, A.1
  • 9
    • 2942612846 scopus 로고    scopus 로고
    • Using a quantitative blueprint to reprogram the dynamics of the flagella gene network
    • Kalir, S. & Alon, U. Using a quantitative blueprint to reprogram the dynamics of the flagella gene network. Cell 117, 713-720 (2004).
    • (2004) Cell , vol.117 , pp. 713-720
    • Kalir, S.1    Alon, U.2
  • 10
    • 33746428728 scopus 로고    scopus 로고
    • A coherent feed-forward loop with a sum input fuction prolongs flagella expression in Escherichia coli
    • 2005. 0006
    • Kalir, S., Mangan, S. & Alon, U. A coherent feed-forward loop with a sum input fuction prolongs flagella expression in Escherichia coli. Mol. Syst. Biol. 1, 2005. 0006 (2005).
    • (2005) Mol. Syst. Biol. , vol.1
    • Kalir, S.1    Mangan, S.2    Alon, U.3
  • 11
    • 0035875010 scopus 로고    scopus 로고
    • Ordering genes in a flagella pathway by analysis of expression kinetics from living bacteria
    • Kalir, S. et al. Ordering genes in a flagella pathway by analysis of expression kinetics from living bacteria. Science 292, 2080-2083 (2001).
    • (2001) Science , vol.292 , pp. 2080-2083
    • Kalir, S.1
  • 12
    • 27144452560 scopus 로고    scopus 로고
    • Applications of autofluorescent proteins for in situ studies in microbial ecology
    • Larrainzar, E., O'Gara, F. & Morrissey, J.P. Applications of autofluorescent proteins for in situ studies in microbial ecology. Annu. Rev. Microbiol. 59, 257-277 (2005).
    • (2005) Annu. Rev. Microbiol. , vol.59 , pp. 257-277
    • Larrainzar, E.1    O'Gara, F.2    Morrissey, J.P.3
  • 13
    • 0036578795 scopus 로고    scopus 로고
    • Network motifs in the transcriptional regulation network of Escherichia coli
    • Shen-Orr, S.S., Milo, R., Mangan, S. & Alon, U. Network motifs in the transcriptional regulation network of Escherichia coli. Nat. Genet. 31, 64-68. (2002).
    • (2002) Nat. Genet. , vol.31 , pp. 64-68
    • Shen-Orr, S.S.1    Milo, R.2    Mangan, S.3    Alon, U.4
  • 14
    • 0242364231 scopus 로고    scopus 로고
    • The coherent feedforward loop serves as a sign-sensitive delay element in transcription networks
    • Mangan, S., Zaslaver, A. & Alon, U. The coherent feedforward loop serves as a sign-sensitive delay element in transcription networks. J. Mol. Biol. 334, 197-204 (2003).
    • (2003) J. Mol. Biol. , vol.334 , pp. 197-204
    • Mangan, S.1    Zaslaver, A.2    Alon, U.3
  • 15
    • 32044462728 scopus 로고    scopus 로고
    • The incoherent fee-forward loop accelerates the response-time of the gal system of Escherichia coli
    • Mangan, S., Itzkovits, S., Zaslaver, A. & Alon, U. The incoherent fee-forward loop accelerates the response-time of the gal system of Escherichia coli. J. Mol. Biol. 356, 1073-1081 (2006).
    • (2006) J. Mol. Biol. , vol.356 , pp. 1073-1081
    • Mangan, S.1    Itzkovits, S.2    Zaslaver, A.3    Alon, U.4
  • 18
    • 15444350252 scopus 로고    scopus 로고
    • The complete genome sequence of Escherichia coli K-12
    • Blattner, F.R. et al. The complete genome sequence of Escherichia coli K-12. Science 277, 1453-1474 (1997).
    • (1997) Science , vol.277 , pp. 1453-1474
    • Blattner, F.R.1
  • 19
    • 0036069537 scopus 로고    scopus 로고
    • Gene expression profiling of Escherichia coli growth transitions: An expanded stringent response mode
    • Chang, D.E., Smalley, D.J. & Conway, T. Gene expression profiling of Escherichia coli growth transitions: An expanded stringent response mode. Mol. Microbiol. 45, 289-306 (2002).
    • (2002) Mol. Microbiol. , vol.45 , pp. 289-306
    • Chang, D.E.1    Smalley, D.J.2    Conway, T.3
  • 20
    • 0000498179 scopus 로고
    • The biosynthesis of beta-galactosidase (lactase) in Escherichia coli; the specificity of induction
    • Monod, J., Cohen-Bazire, G. & Cohn, M. The biosynthesis of beta-galactosidase (lactase) in Escherichia coli; the specificity of induction. Biochim. Biophys. Acta 7, 585-599 (1951).
    • (1951) Biochim. Biophys. Acta , vol.7 , pp. 585-599
    • Monod, J.1    Cohen-Bazire, G.2    Cohn, M.3
  • 21
    • 0008658635 scopus 로고    scopus 로고
    • Integration of control devices: A global regulatory network in Escherichia coli
    • In (ed., Baumberg, S.)
    • Hengge-Aronis, R. Integration of control devices: A global regulatory network in Escherichia coli. In Prokaryotic Gene Expression (ed., Baumberg, S.), 169-193.
    • Prokaryotic Gene Expression , pp. 169-193
    • Hengge-Aronis, R.1
  • 22
    • 13444262374 scopus 로고    scopus 로고
    • EcoCyc: A comprehensive database resource for Escherichia coli
    • Keseler, I.M. et al. EcoCyc: A comprehensive database resource for Escherichia coli. Nucleic Acids Res. 33, D334-D337 (2005).
    • (2005) Nucleic Acids Res. , vol.33
    • Keseler, I.M.1
  • 23
    • 0029788013 scopus 로고    scopus 로고
    • Differential regulation of multiple overlapping promoters in flagellar class II operons in Escherichia coli
    • Liu, X. & Matsumura, P. Differential regulation of multiple overlapping promoters in flagellar class II operons in Escherichia coli. Mol. Microbiol. 21, 613-620 (1996).
    • (1996) Mol. Microbiol. , vol.21 , pp. 613-620
    • Liu, X.1    Matsumura, P.2
  • 25
    • 0032983097 scopus 로고    scopus 로고
    • Structure and expression of the fliA operon of Salmonella typhimurium
    • Ikebe, T., Iyoda, S. & Kutsukake, K. Structure and expression of the fliA operon of Salmonella typhimurium. Microbiol. 145, 1389-1396 (1999).
    • (1999) Microbiol. , vol.145 , pp. 1389-1396
    • Ikebe, T.1    Iyoda, S.2    Kutsukake, K.3
  • 26
    • 30644465547 scopus 로고    scopus 로고
    • The comprehensive updated regulatory network of Escherichia coli K-12
    • Salgado, H. et al. The comprehensive updated regulatory network of Escherichia coli K-12. BMC Bioinformatics 7, 5 (2006).
    • (2006) BMC Bioinformatics , vol.7 , pp. 5
    • Salgado, H.1
  • 27
    • 0142215475 scopus 로고    scopus 로고
    • Global analysis of protein expression in yeast
    • Ghaemmaghami, S. et al. Global analysis of protein expression in yeast. Nature 425, 737-741 (2003).
    • (2003) Nature , vol.425 , pp. 737-741
    • Ghaemmaghami, S.1
  • 28
    • 33745220278 scopus 로고    scopus 로고
    • Single-cell proteomic analysis of S. cerevisiae reveals the architecture of biological noise
    • Newman, J.R. et al. Single-cell proteomic analysis of S. cerevisiae reveals the architecture of biological noise. NAture 441, 840-846 (2006).
    • (2006) NAture , vol.441 , pp. 840-846
    • Newman, J.R.1
  • 29
    • 19544379881 scopus 로고    scopus 로고
    • Stochasticity in gene expression: From theories to phenotypes
    • Kaern, M., Elston, T.C., Blake, W.J. & Collins, J.J. Stochasticity in gene expression: From theories to phenotypes. Nat. Rev. Genet. 6, 451-464 (2005).
    • (2005) Nat. Rev. Genet. , vol.6 , pp. 451-464
    • Kaern, M.1    Elston, T.C.2    Blake, W.J.3    Collins, J.J.4
  • 30
    • 0037119587 scopus 로고    scopus 로고
    • Stochastic gene expression in a single cell
    • Elowitz, M.B., Levine, A.J., Siggia, E.D. & Swain, P.S. Stochastic gene expression in a single cell. Science 297, 1183-1186 (2002).
    • (2002) Science , vol.297 , pp. 1183-1186
    • Elowitz, M.B.1    Levine, A.J.2    Siggia, E.D.3    Swain, P.S.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.