Mapping of the loci controlling oleic and linolenic acid contents and development of fad2 and fad3 allele-specific markers in canola (Brassica napus L.)

Theoretical and Applied Genetics

Volumn 113, Issue 3, 2006, Pages 497-507

  Hu, Xueyi ^a   Sullivan Gilbert, Mandy ^a   Gupta, Manju ^a   Thompson, Steven A ^a  

^a DOW AGROSCIENCES LLC   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CLONING; CONCENTRATION (PROCESS); ENZYMES; GENES; GENETIC ENGINEERING; OLEIC ACID;

CANOLA; GENOMIC CLONES; LINOLENIC ACID; NUCLEOTIDE MUTATIONS;

PLANTS (BOTANY);

ACYL COENZYME A DESATURASE; DELTA 12 FATTY ACID DESATURASE; DELTA-12 FATTY ACID DESATURASE; LINOLENIC ACID; OLEIC ACID; VEGETABLE PROTEIN;

ALLELE; AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; CHROMOSOME MAP; GENETIC MARKER; GENETICS; METABOLISM; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHENOTYPE; QUANTITATIVE TRAIT LOCUS; RAPESEED; SEQUENCE ALIGNMENT; SINGLE NUCLEOTIDE POLYMORPHISM;

ALLELES; ALPHA-LINOLENIC ACID; AMINO ACID SEQUENCE; BRASSICA NAPUS; CHROMOSOME MAPPING; DNA MUTATIONAL ANALYSIS; FATTY ACID DESATURASES; GENETIC MARKERS; MOLECULAR SEQUENCE DATA; OLEIC ACID; PHENOTYPE; PLANT PROTEINS; POLYMORPHISM, SINGLE NUCLEOTIDE; QUANTITATIVE TRAIT LOCI; SEQUENCE ALIGNMENT;

BRASSICA NAPUS; BRASSICA NAPUS VAR. NAPUS;

EID: 33745864826     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-006-0315-1     Document Type: Article

References (37)

1. de Arruda M, Lyamichev VI, Eis PS, Iszczyszyn W, Kwiatkowski RW, Law S, Olson MC, Rasmussen EB (2002) Invader technology for DNA and RNA analysis: principles and applications. Exp Rev Mol Diagn 2:487-96
2. Auld DL, Heikkinen MK, Erickson DA, Sernyk JL, Romero JE (1992) Rapeseed mutants with reduced levels of polyunsaturated fatty acids and increased levels of oleic acid. Crop Sci 32:657-662
3. Barret P, Delourme R, Brunet D, Jourdren C, Horvais R, Renard M (1999) Low linolenic acid level in rapeseed can be easily assessed through the detection of two single base substitution in fad3 genes. In: proceeding of the 10th international rapeseed congress, Canberra, Australia, pp 26-29
4. Brown JWS (1996) Arabidopsis intron mutations and pre-mRNA splicing. Plant J 10:771-780
5. Canvin DT (1965) Effects of temperatures on the oil content and fatty acid composition of the oils from several oil seed crops. Can J Bot 43:63-69
6. Chen JL, Beversdorf WD (1990) Fatty acid inheritance in microspore-derived populations of spring rapeseed (Brassica napus L.). Theor Appl Genet 80:465-469
7. Deng X, Scarth R (1998) Temperature effects on fatty acid composition during development of low linolenic oilseed rape (Brassica napus L.). J Am Oil Chem Soc 75:759-766
8. Hu J, Quiros C, Arus P, Struss D, Robbelen G (1995) Mapping of a gene determining linolenic acid concentration in rapeseed with DNA-based markers. Theor Appl Genet 90:258-262
9. Hu J, Li G, Struss D, Quiros CF (1999) SCAR and RAPD markers associated with 18-carbon fatty acids in rapeseed, Brassica napus. Plant Breed 118:145-150
10. Jourdren C, Barret P, Brunel D, Delourme R, Renard M (1996a) Specific molecular marker of the genes controlling linolenic acid content in rapeseed. Theor Appl Genet 93:512-518
11. Jourdren C, Barret P, Horvais R, Delourme R, Renard M (1996b) Identification of RAPD markers linked to linolenic acid genes in rapeseed. Euphytica 90:351-357
12. Kosambi DD (1944) The estimation of map distances from recombination values. Ann Eugen 12:172-175
13. Lorkovic ZJ, Kirk DAW, Lambermon MHL, Filipowicz W (2000) Pre-mRNA splicing in higher plants. Trends Plant Sci 5:160-167
14. Lyamichev V, Neri B (2003) Invader assay for SNP genotyping. Methods Mol Biol 212:229-40
15. McCullough AJ, Lou H, Schuler MA (1993) Factors affecting authentic 5′ splice site selection in plant nuclei. Mol Cell Biol 13:1323-1331
16. Nishiuchi T, Nishimura M, Arondel V, Iba K (1994) Genomic nucleotide sequence of a gene encoding a microsomal ω-3 fatty acid desaturase from Arabidopsis thaliana. Plant Physiol 105:767-768
17. Okuley J, Lightner J, Feldmann K, Yadav N, Lark E (1996) Arabidopsis fad2 gene encodes the enzyme that is essential for polyunsaturated lipid synthesis. Plant Cell 6:147-158
18. Parkin IAP, Sharpe AG, Keith DJ, Lydiate DJ (1995) Identification of the A and C genomes of amphidiploid Brassica napus (oilseed rape). Genome 38:1122-1131
19. Rajcan I, Kasha KJ, Kott LS, Beversdorf WD (1999) Detection of molecular markers associated with linolenic and erucic acid levels in spring rapeseed (Brassica napus L.). Euphytica 105:173-181
20. Rakow G (1973) Selektion auf linol- und linolen-saureghalt in rapssamen nach mutagener behand-lung. Z Plauzen 69:205-209
21. Rücker B, Röbbelen G (1996) Impact of low linolenic acid content on seed yield of winter oilseed rape (Brassica napus L.). Plant Breed 115:226-230
22. Scheffler JA, Sharpe AG, Schmidt H, Sperling P, Parkin IAP, Lühs W, Lydiate DJ, Heinz E (1997) Dasaturase multigene families of Brassica napus arose through genome duplication. Theor Appl Genet 94:583-591
23. Schierholt A, Becker HC, Ecke W (2000) Mapping a high oleic acid mutation in winter oilseed rape (Brassica napus L.). Theor Appl Genet 101:897-901
24. Schierholt A, Rücker B, Becker HC (2001) Inheritance of high oleic acid mutations in winter oilseed rape (Brassica napus L.). Crop Sci 41:1444-1449
25. Simpson CG, McQuade C, Lyon J, Brown JWS (1998) Characterization of exon skipping mutants of the COP1 gene from Arabidopsis. Plant J 15:125-131
26. Somers DJ, Friesen KRD, Rakow G (1998) Identification of molecular markers associated with linoleic acid desaturation in Brassica napus. Theor Appl Genet 96:897-903
27. Tanhuanpää P, Schulman A (2002) Mapping of genes affecting linolenic acid content in Brassica rapa ssp. oleifera. Mol Breed 10:51-62
28. Tanhuanpää P, Vilkki J, Vilkki HJ (1995) Association of a RAPD marker with linolenic acid concentration in the seeded oil of rapeseed (Brassica napus L.). Genome 38:414-416
29. Tanhuanpää P, Vilkki J, Vilkki HJ (1996) Mapping of a QTL for oleic acid concentration in spring turnip rape (Brassica rapa ssp. oleifera). Theor Appl Genet 92:952-956
30. Tanhuanpää P, Vilkki J, Vihinen M (1998) Mapping and cloning of FAD2 gene to develop allele-specific PCR for oleic acid in spring turnip rape (Brassica rapa ssp. oleifera). Mol Breed 4:543-550
31. Thies W (1971) Schnelle und einfache Analysen der Fettsä urezusammensetzung in einzelnen Rapskotyledonen. I. Gaschromatographische und papierchromatographische Methoden. Z Pflanzenzuechtg 65:181-202
32. Thormann CE, Romero J, Namtet J, OsbornTC (1996) Mapping loci controlling the concentrations of erucic and linolenic acids in seed oil of Brassica napus L. Theor Appl Genet 93:282-286
33. Udall JA, Quijada PA, Osborn TC (2005) Detection of chromosomal rearrangements derived from homeologous recombination in four mapping populations of Brassica napus L. Genetics 169:967-979
34. Van Ooijen JW, Voorrips RE (2001) JoinMap® Version 3.0: Software for the calculation of genetic linkage maps. Plant Research International, Wageningen, The Netherlands
35. Van Ooijen JW, Boer M, Jansen RC, Maliepaard C (2002) Map-QTL® 4.0: software for the calculation of QTL positions on genetic maps. Plant Research International, Wageningen, The Netherlands
36. Vos P, Hogers R, Bleeker M, Reijans M, van de Lee T, Hornes M, Frijters A, Pot J, Pleman J, Kuiper M, Zabeau M (1995) AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res 23:4407-4414
37. Wu DY, Ugozzoli L, Pal BK, Wallace RB (1989) Allele-specific enzymatic amplification of β-globin genomic DNA for diagnosis of sickle cell anemia. Proc Natl Acad Sci USA 86:2757-2760