Evolutionary history of woodpeckers and allies (Aves: Picidae): Placing key taxa on the phylogenetic tree

Molecular Phylogenetics and Evolution

Volumn 40, Issue 2, 2006, Pages 389-399

  Benz, Brett W ^a   Robbins, Mark B ^a   Peterson, A Townsend ^a  

^a UNIVERSITY OF KANSAS   (United States)

Author keywords

Bayesian analysis; Biogeography; Picidae; Woodpecker phylogeny

Indexed keywords

AVIAN PROTEIN;

ANIMAL; ARTICLE; BIRD; GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; TIME;

ANIMALS; AVIAN PROTEINS; BASE SEQUENCE; BIRDS; PHYLOGENY; TIME FACTORS;

AVES; BLYTHIPICUS; CELEUS; COLAPTES; DINOPIUM; DRYOCOPUS; MELANERPES; NESOCTITES MICROMEGAS; PICIDAE; PICINAE; PICOIDES; PICULUS; PICUMNUS; PICUS; REINWARDTIPICUS; SASIA;

EID: 33745811311     PISSN: 10557903     EISSN: 10959513     Source Type: Journal    
DOI: 10.1016/j.ympev.2006.02.021     Document Type: Article

References (40)

1. 16O measurements on benthic foraminifera. Paleoceanography 17 (2002) 1-11
2. Burt W.H. Adaptive modifications in the woodpeckers. Univ. Calif. Publ. Zool. 32 (1930) 455-524
3. DeFilippis V.R., and Moore W.S. Resolution of phylogenetic relationships among recently evolved species as a function of amount of DNA sequence: an empirical study based on woodpeckers (Aves: Picidae). Mol. Phylogenet. Evol. 16 (2000) 143-160
4. Donoghue M.J., Bell C.D., and Li J. Phylogenetic patterns in Northern Hemisphere plant geography. Int. J. Plant. Sci. 162 (2001) S41-S52
5. Farris J.S., Kallersjo M., Kluge A.G., and Bult C. Testing significance of incongruence. Cladistics 10 (1994) 315-319
6. Goodge W.R. Anatomical evidence for phylogenetic relationships among woodpeckers. Auk 89 (1972) 65-85
7. Goodwin D. Notes on woodpeckers (Picidae). Bull. Br. Mus. Nat. Hist. (Zoology) 17 (1968) 1-44
8. Helm-Bychowski K., and Cracraft J. Recovering phylogenetic signal from DNA sequences: relationships within the corvine assemblage (class Aves) as inferred from complete sequences of the mitochondrial DNA cytochrome-b gene. Mol. Biol. Evol. 10 (1993) 1196-1214
9. Johnson W.E., Eizirik E., Pecon-Slattery J., Murphy W.J., Antunes A., Teeling E., and O'Brien S.J. The late miocene radiation of modern Felidae: a genetic assessment. Science 311 (2006) 73-77
10. Johnson K.P., and Sorenson M.D. Comparing molecular evolution in two mitochondrial protein coding genes (cytochrome b and ND2) in the dabbling ducks (Tribe: Anatini). Mol. Phylogenet. Evol. 10 (1998) 82-94
11. Klicka J., and Zink R.M. The importance of recent ice ages in speciation: a failed paradigm. Science 277 (1997) 1666-1669
12. Kocher T.D., Thomas W.K., Meyer A., Edwards S.V., Paabo S., Villablancha F.X., and Wilson A.C. Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers. Proc. Natl. Acad. Sci. USA 86 (1989) 6196-6200
13. Lanyon S.M. Phylogenetic frameworks-towards a firmer foundation for the comparative approach. Biol. J. Linn. Soc. 49 (1993) 45-61
14. Laybourne R.C., Deedrick D.W., and Hueber F.M. Feather in amber is earliest New World fossil of Picidae. Wilson Bull. 106 (1994) 18-25
15. Li W.-H., and Graur D. Fundamentals of Molecular Evolution (1991), Sinauer Associates, Sunderland, Mass
16. Lovette I.J. Mitochondrial dating and mixed support for the "2% rule" in birds. Auk 121 (2004) 1-6
17. Moyle R.G. Phylogenetics of barbets (Aves: Piciformes) based on nuclear and mitochondrial DNA sequence data. Mol. Phylogenet. Evol. 30 (2004) 187-200
18. Peterson A.T., Cicero C., and Wieczorek J. Free and open access to distributed data from bird specimens: why?. Auk 122 (2005) 987-990
19. Posada D., and Crandall K.A. Modeltest: testing the model of DNA substitution. Bioinformatics 14 (1998) 817-818
20. Prychitko T.M., and Moore W.S. Comparative evolution of the mitochondrial b gene and nuclear β-fibrinogen intron 7 in woodpeckers. Mol. Biol. Evol. 17 (2000) 1101-1111
21. Ronquist F., and Huelsenbeck J.P. MrBayes3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19 (2003) 1572-1574
22. Sheldon F.H., Whittingham L.A., Moyle R.G., Slikas B., and Winkler D.W. Phylogeny of swallows (Aves: Hirundinidae) estimated from nuclear and mitochondrial DNA sequences. Mol. Phylogenet. Evol. 35 (2005) 254-270
23. Shimodaira H., and Hasegawa M. Multiple comparisons of log-likelihoods with applications to phylogenetic inference. Mol. Biol. Evol. 16 (1999) 1114-1116
24. Short L.L. Woodpeckers of the World (1982), Delaware Museum of Natural History, Greenville, Delaware
25. Short L.L. Habits of three endemic West Indian woodpeckers (Aves, Picidae). Am. Mus. Novit. 2549 (1974) 1-44
26. Sibley C.G., and Ahlquist J.E. Phylogeny and Classification of Birds: A Study in Molecular Evolution (1990), Yale University Press, New Haven, Connecticut
27. Soberón J. Linking biodiversity information sources. Trends Ecol. Evol. 14 (1999) 291
28. Styring A.R., and bin Hussin M.Z. Foraging ecology of woodpeckers in lowland Malaysian rain forests. J. Trop. Ecol. 20 (2004) 487-494
29. Swofford D.L. PAUP*: Phylogenetic Analysis Using Parsimony (* and other methods). Ver 4.0b4a (2000), Sinauer Associates, Sunderland, Massachusetts
30. Tennant, M.R., 1991. Phylogenetic systematics of the Picinae. Ph.D. dissertation, Wayne State University, Detroit, Michigan.
31. Webb, D.M., 2002. Morphological and molecular evolution of the order Piciformes with emphasis on the woodpeckers of the world (subfamily Picinae). Ph.D. Dissertation, Wayne State University, Detroit, Mich.
32. Webb D.M., and Moore W.S. A phylogenetic analysis of woodpeckers and their allies using 12S, Cyt b, and COI nucleotide sequences. Mol. Phylogenet. Evol. 36 (2005) 233-248
33. Weibel A.C., and Moore W.S. Molecular phylogeny of a cosmopolitan group of woodpeckers (genus Picoides) based on COI and cyt b mitochondrial gene sequences. Mol. Phylogenet. Evol. 22 (2002) 65-75
34. Weibel A.C., and Moore W.S. A test of a mitochondrial gene-based phylogeny of woodpeckers (genus Picoides) using an independent nuclear gene, β-fibrinogen intron 7. Mol. Phylogenet. Evol. 22 (2002) 247-257
35. Weibel A.C., and Moore W.S. Plumage convergence in Picoides woodpeckers based on a molecular phylogeny, with emphasis on convergence in Downy and Hairy woodpeckers. Condor 107 (2005) 797-809
36. Weir J.T., and Schluter D. Ice sheets promote speciation in boreal birds. Proc. R. Soc. B 271 (2004) 1881-1887
37. Winker K. The crumbling infrastructure of biodiversity: the avian example. Conserv. Biol. 10 (1996) 703-707
38. Winkler H., and Christie D.A. Family Picidae (woodpeckers). In: del Hoyo J., Elliot A., and Sargatal J. (Eds). Handbook of the Birds of the World, Vol. 7, Jacamars to Woodpeckers (2002), Lynx Editions, Barcelona
39. Winkler H., Kotaka N., Gamauf A., Nittinger F., and Haring E. On the phylogenetic position of the Okinawa Woodpecker (Sapheopipo noguchii). J. für Ornithol. 146 (2005) 103-110
40. Zink R.M., Rowher S., Andreev A.V., and Dittmann D.L. Trans-Beringia comparisons of mitochondrial DNA differentiation in birds. Condor 97 (1995) 639-649