메뉴 건너뛰기




Volumn 1, Issue , 2005, Pages 298-303

Functional grouping of genes using spectral clustering and gene ontology

Author keywords

[No Author keywords available]

Indexed keywords

COMPUTER AIDED ANALYSIS; DATA REDUCTION; FUNCTION EVALUATION; GENES; KNOWLEDGE ENGINEERING;

EID: 33745786698     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/IJCNN.2005.1555846     Document Type: Conference Paper
Times cited : (27)

References (25)
  • 1
    • 8844285933 scopus 로고    scopus 로고
    • Gene Ontology-based clustering of gene expression data
    • B. Adryan and R. Schuh. Gene Ontology-based clustering of gene expression data. Bioinformatics, 20(16):2851-2852, 2004.
    • (2004) Bioinformatics , vol.20 , Issue.16 , pp. 2851-2852
    • Adryan, B.1    Schuh, R.2
  • 2
    • 3142665525 scopus 로고    scopus 로고
    • GOstat: Find statistically overexpressed Gene Ontologies within groups of genes
    • T. Beißbarth and T. Speed. GOstat: find statistically overexpressed Gene Ontologies within groups of genes. Bioinformatics, 20(9): 1464-1465, 2004.
    • (2004) Bioinformatics , vol.20 , Issue.9 , pp. 1464-1465
    • Beißbarth, T.1    Speed, T.2
  • 5
    • 0348143190 scopus 로고    scopus 로고
    • Scoring clustering solutions by their biological relevance
    • I. Gat-Viks, R. Sharan, and R. Shamir. Scoring clustering solutions by their biological relevance. Bioinformatics, 19(18):2381-2389, 2003.
    • (2003) Bioinformatics , vol.19 , Issue.18 , pp. 2381-2389
    • Gat-Viks, I.1    Sharan, R.2    Shamir, R.3
  • 6
    • 33745947350 scopus 로고    scopus 로고
    • Gene Lynx. http://www.genelynx.org. 2004.
    • (2004)
  • 7
    • 0345832338 scopus 로고    scopus 로고
    • A global test for groups of genes: Testing association with a clinical outcome
    • J.J. Goeman, S.A. van de Geer, F. de Kort, and H.C. van Houwelingen. A global test for groups of genes: testing association with a clinical outcome. Bioinformatics, 20(1):93-99, 2004.
    • (2004) Bioinformatics , vol.20 , Issue.1 , pp. 93-99
    • Goeman, J.J.1    Van De Geer, S.A.2    De Kort, F.3    Van Houwelingen, H.C.4
  • 8
    • 0038014879 scopus 로고    scopus 로고
    • Co-clustering of biological networks and gene expression data
    • D. Hanisch, A. Zien, R. Zimmer, and T. Lengauer. Co-clustering of biological networks and gene expression data. Bioinformatics, 18 (Supplement):S145-S154, 2002.
    • (2002) Bioinformatics , vol.18 , Issue.SUPPL.
    • Hanisch, D.1    Zien, A.2    Zimmer, R.3    Lengauer, T.4
  • 9
    • 0038729567 scopus 로고    scopus 로고
    • Learning rule-based models of biological process from gene expression time profiles using Gene Ontology
    • T.R. Hvidsten, A. Laegreid, and J. Komorowski. Learning rule-based models of biological process from gene expression time profiles using Gene Ontology. Bioinformatics, 19(9): 1116-1123, 2003.
    • (2003) Bioinformatics , vol.19 , Issue.9 , pp. 1116-1123
    • Hvidsten, T.R.1    Laegreid, A.2    Komorowski, J.3
  • 12
    • 1342330530 scopus 로고    scopus 로고
    • A graph-theoretic modeling on go space for biological interpretation on gene clusters
    • S.G. Lee, J.U. Hur, and Kim Y.S. A graph-theoretic modeling on go space for biological interpretation on gene clusters. Bioinformatics, 20(3):381-388, 2004.
    • (2004) Bioinformatics , vol.20 , Issue.3 , pp. 381-388
    • Lee, S.G.1    Hur, J.U.2    Kim, Y.S.3
  • 13
    • 0037480738 scopus 로고    scopus 로고
    • Semantic similarity measures across the gene ontology: The relationship between sequence and annotation
    • P.W. Lord, R.D. Stevens, A. Brass, and C.A. Goble. Semantic similarity measures across the gene ontology: the relationship between sequence and annotation. Bioinformatics, 19:1275-1283, 2002.
    • (2002) Bioinformatics , vol.19 , pp. 1275-1283
    • Lord, P.W.1    Stevens, R.D.2    Brass, A.3    Goble, C.A.4
  • 15
    • 0037433059 scopus 로고    scopus 로고
    • A literature-based method for assessing the functional coherence of a gene group
    • S. Raychaudhuri and R.B. Altman. A literature-based method for assessing the functional coherence of a gene group. Bioinformatics, 19(3):396-401, 2003.
    • (2003) Bioinformatics , vol.19 , Issue.3 , pp. 396-401
    • Raychaudhuri, S.1    Altman, R.B.2
  • 17
    • 2342432868 scopus 로고    scopus 로고
    • Ontologizing gene-expression microarray data: Characterizing clusters with gene ontology
    • P.N Robinson, A. Wollstein, U. Böhme, and B. Beattie. Ontologizing gene-expression microarray data: characterizing clusters with gene ontology. Bioinformatics, 20(6):979-981, 2003.
    • (2003) Bioinformatics , vol.20 , Issue.6 , pp. 979-981
    • Robinson, P.N.1    Wollstein, A.2    Böhme, U.3    Beattie, B.4
  • 18
    • 0023453329 scopus 로고
    • Silhouettes: A graphical aid to the interpretation and validation of cluster analysis
    • P.J. Rousseeuw. Silhouettes: a graphical aid to the interpretation and validation of cluster analysis. Journal of Computational Applications in Math, 20:53-65, 1987.
    • (1987) Journal of Computational Applications in Math , vol.20 , pp. 53-65
    • Rousseeuw, P.J.1
  • 20
    • 2442685416 scopus 로고    scopus 로고
    • CLENCH: A program for calculating Cluster ENriCHment using Gene Ontology
    • N.H. Shah and N.V. Fedoroff. CLENCH: a program for calculating Cluster ENriCHment using Gene Ontology. Bioinformatics, 20(7): 1196-1197, 2004.
    • (2004) Bioinformatics , vol.20 , Issue.7 , pp. 1196-1197
    • Shah, N.H.1    Fedoroff, N.V.2
  • 21
    • 3142706495 scopus 로고    scopus 로고
    • New methods for joint analysis of biological networks and expression data
    • F. Sohler, D. Hanisch, and R. Zimmer. New methods for joint analysis of biological networks and expression data. Bioinformatics, 20(10): 1517-1521, 2004.
    • (2004) Bioinformatics , vol.20 , Issue.10 , pp. 1517-1521
    • Sohler, F.1    Hanisch, D.2    Zimmer, R.3
  • 24
    • 0346801873 scopus 로고    scopus 로고
    • The gene ontology (GO) database and informatics resource
    • The Gene Ontology Consortium. The gene ontology (GO) database and informatics resource. Nucleic Acids Research. 32:D258-D261, 2004.
    • (2004) Nucleic Acids Research , vol.32


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.