Mitotic transmission of ribosomal chromatin in embryonic pig kidney cells (PK cell line)

Tsitologiya

Volumn 48, Issue 3, 2006, Pages 226-239

  Stefanova, V N ^a,b   Demin, S Yu ^b  

^a All Russian Research Institute of Farm Animal Genetics and Breeding   (Russian Federation)

^b INSTITUTE OF CYTOLOGY   (Russian Federation)

Author keywords

[No Author keywords available]

Indexed keywords

RIBOSOME RNA;

ANIMAL; ARTICLE; CELL STRAIN; CHROMOSOME NOR; FLUORESCENCE IN SITU HYBRIDIZATION; GENETICS; HETEROCHROMATIN; KARYOTYPING; MITOSIS; RNA INTERFERENCE; SWINE; ULTRASTRUCTURE;

ANIMALS; HETEROCHROMATIN; IN SITU HYBRIDIZATION, FLUORESCENCE; KARYOTYPING; LLC-PK1 CELLS; MITOSIS; NUCLEOLUS ORGANIZER REGION; RNA INTERFERENCE; RNA, RIBOSOMAL; SWINE;

EID: 33745777850     PISSN: 00413771     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (80)

1. Russian source
2. Russian source
3. Russian source
4. Russian source
5. Russian source
6. Russian source
7. Russian source
8. Azuara V., Brown K. E., Williams R. R., Webb N., Dillon N., Festenstein R., Buckle V., Merkenschlager M., Fisher A. G. 2003. Heritable gene silencing in lymphocytes delays chromatid resolution without affecting the timing of DNA replication. Nat. Cell Biol. 5 : 668-674.
9. Azuara V., Fisher AOPG. 2003. Maintaining transcriptional states through DNA replication. Cell Cycle. 2 : 521-524.
10. Bell P., Mais C., McStay B., Scheer U. 1997. Association of the nucleolar transcription factor UBF with the transcriptionally inactive rRNA genes of pronuclei and early Xenopus embryos. J. Cell Sci. 110 : 2053-2063.
11. Belmont A. S., Braunfeld M. B., Sedat J. W., Agard D. A. 1989. Large-scale chromatin structural domains within mitotic and interphase chromosomes in vivo and in vitro. Chromosoma. 98 : 129-143.
12. Belmont A. S., Brace K. 1994. Visualization of G1 chromosomes: a folded, twisted, supercoiled chromonema model of interphase chromatid structure. J. Cell Biol. 127 : 287-302.
13. Carmo-Fonseca M., Mendes-Soares L., Campos I. 2000. To be or not to be in the nucleolus. Nat. Cell Biol. 2 : E107-El 12.
14. Cheutin T., O'Donohue M. F., Beorchia A., Vandelaer M., Kaplan H., Defever B., Ploton D., Thiry M. 2002. Three-dimensional organization of active rRNA genes within the nucleolus. J. Cell Sci. 115 : 3297-3307.
15. Chowdhary B. P., de la Sena C., Harbitz I., Eriksson L., Gustavsson I. 1995. FISH on metaphase and interphase chromosomes demonstrates the physical order of the genes for GPI, CRC and LIPE in pigs. Cytogenet. Cell Genet. 71 : 175-178.
16. Christensen K., Brusgaard K., Malchenko S., Lohi O., Serov O. 1996. Standartization of the american mink (Mustella vision) karyotype and some cosmid in situ hybridization results. Arch. Zootec. 45 : 259-265.
17. Claussen U., Michel S., Muhlig P., Westermann M., Grummt U. W., Kromeyer-Hauschild K., Liehr T. 2002. Demystifying chromosome preparation and the implications for the concept of chromosome condensation during mitosis. Cytogenet. Genome Res. 98 : 136-146.
18. Czaker R., Mayr B. 1980. Detection of nucleolus organizer regions (NOR) in the chromosome of the domestic pig (Sus scrofa domestica). Experientia. 36 : 1356-1357.
19. Dammann R., Lucchini R., Koller T., Sogo J. M. 1995. Transcription in the yeast rRNA gene locus: distribution of the active gene copies and chromatin structure of their franking regulatory sequences. Mol. Cell. Biol. 15 : 5294-5303.
20. Dillon N. 2004. Heterochromatin structure and function. Biol. Cell. 96 : 631-637.
21. DiMario P. J. 2004. Cell and molecular biology of nucleolar assembly and disassembly. Int. Rev. Cytol. 239 : 99-178.
22. French S. L., Osheim Y. N., Cioci F., Nomura M., Beyer A. L. 2003. In exponentially growing Saccharomyces cerevisiae cells, rRNA synthesis is determined by the summed RNA polymerase I loading rate rather than by the number of active genes. Mol. Cell. Biol. 23 : 1558-1568.
23. Gebrane-Younes J., Fomproix N., Hernandez-Verdun D 1997. When rDNA transcription is arrested during mitosis, UBF is still associated with non-condensed rDNA. J. Cell Sci. 110 : 2429-2440.
24. Gibbons R. J., McDowell T. L., Raman S., O'Rourke D. M., Garrick D., Ayyub H., Higgs D. R. 2000. Mutations in ATRX, encoding a SWI/SNF-like protein, cause diverse changes in the pattern of DNA methylation. Nat. Genet. 24 : 368-371.
25. Goessens G. 1984. Nucleolar structure. Int. Rev. Cytol. 87 : 107-158.
26. Grummt I. 2003. Life on a planet of its own: regulation of RNA polymerase I transcription in the nucleolus. Genes. Develop. 17 : 1691-1702.
27. Grummt I., Pikaard C. S. 2003. Epigenetic silencing of RNA polymerase I transcription. Nat. Rev. Mol. Cell, Biol. 4 : 641-649.
28. Guillen A. K., Hirai Y., Tanoue T., Hirai H. 2004. Transcriptional repression mechanisms of nucleolus organizer regions (NORs) in humans and chimpanzees. Chromosome Res. 12 : 225-237.
29. Haaf T., Schmid M. 1991. Chromosome topology in mammalian interphase nuclei. Exp. Cell Res. 192 : 325-332.
30. Hadjiolov A. A. 1985. Ribosomal genes. In: The nucleolus and ribosome biogenesis. Wien: Springer-Verlag. 5-51.
31. Heliot L., Kaplan H., Lucas L., Klein C., Beorchia A., Doco-Fenzy M., Menager M., Thiry M., O'Donohue M. F., Platon D. 1997. Electron tomography of metaphase nucleolar organizer regions: evidence for a twisted-loop organization. Mol. Biol. Cell. 8 : 2199-2216.
32. Heliot L., Mongelard F., Klein C., O'Donohue M. F., Chassery J. M., Robert-Nicond M., Usson Y. 2000. Nonrandom distribution of metaphase AgNOR staining patterns on human acrocentric chromosomes. J. Histochem. Cytochem. 48 : 13-20.
33. Hernandez-Verdun D. 1986. Structural organization of the nucleolus in mammalian cells. Methods Achiev. Exp. Pathol. 12 : 26-62.
34. Hernandez-Verdun D., Roussel P. 2003. Regulators of nucleolar functions. Prog. Cell Cycle Res. 5 : 301-308.
35. Holliday R. 1987. The inheritance of epigenetic defects. Science. 238 : 163-170.
36. Holliday R. 2002. Epigenetic comes of age in the twenty-first century. J. Genet. 81 : 1-4.
37. Howell W. 1982. Selective staining of nucleolus organizer regions (NORs). In: The cell nucleus. New York: Acad. Press. 9 : 89-142.
38. Howell W. M., Black D. A. 1980. Controlled silver staining of nucleolus organizer regions with a protective colloidal developer: 1-step method. Experientia. 36 : 1014-1016.
39. 2 period, mitosis). Biol. Cell. 57 : 197-205.
40. Hsu T. C., Spirito S. E., Pardue M. L. 1975. Distribution of 18 + 28S ribosomal genes in mammalian genomes. Chromosoma. 53 : 25-36.
41. Junera H. R., Masson C., Geraud G., Suja J., Hernandez-Verdun D. 1997. Involvement of in situ conformation of ribosomal genes and selective distribution of upstream binding factor in rRNA transcription. Mol. Biol. Cell. 8 : 145-156.
42. Kawasaki K., Minoshima S., Kudoh J., Fukuyama R., Shimizu N. 1992. Methylation status of ribosomal RNA gene clusters in the flow-sorted human acrocentric chromosomes. Mamm. Genome. 3 : 173-178.
43. Lawrence R. J., Pikaard C. S. 2004. Chromatin turn ons and turn offs of ribosomall RNA genes. Cell Cycle. 3 : 880-883.
44. Lemke J., Claussen J., Michel S., Chudoba I., Muhlig P., Westermann M., Sperling K., Rubtsov N., Grummt U. W., Ulmann P. et al. 2002. The DNA-based stricture of human chromosome 5 in interphase. Amer, J. Hum. Genet. 71 : 1051-1059.
45. Li J., Santoro R., Kobernu K., Grummt I. 2005. The chromatin remodeling complex NoRC controls replication timing of rRNA genes. EMBO J. 24 : 120-127.
46. Lucchini R., Sogo J. M. 1992. Different chromatin structures along spacers flanking active and inactive Xenopus rRNA genes. Mol. Cell. Biol. 12 : 4288-4296.
47. Matsui S., Sandberg A. A. 1985. Intranuclear compartmentalization of DNA-dependent RNA polymerases: association of RNA polymcrase I with nucleolar organizing chromosomes. Chromosoma. 92 : 1-6.
48. Milkereit P., Tschochner H. 1998. A specialized form of RNA synthesis is disrupted during transcription. EMBO J. 17 : 3692 3703.
49. Muscarella D. E., Vogt V, M., Bloom S. E. 1985. The ribosomal RNA gene cluster in aneuploid chickens: evidence for increased gene dosage and regulation of gene expression. J. Cell Biol. 101 (5, Pt 1): 1749-1756.
50. Muscarella D. E., Vogt V. M., Bloom S. E. 1987. Characterization of ribosomal RNA synthesis in a gene dosage mutant: the relationship of topoisomerase I and chromatin structure to transcriptional activity. J. Cell Biol. 105 : 1501-1513.
51. Nemeth A., Strohner R., Grummt I., Langst G. 2004. The chromatin remodeling complex NoRC TTF-I cooperate in the regulation of the mammalian rRNA genes in vivo. Nucl. Acids Res. 32 : 4091-4099.
52. Olson M. O., Hingorani K., Szebeni A. 2002. Conventional and nonconventional roles of the nucleolus. Int. Rev. Cytol. 219 : 199-266.
53. Pikaard C. S., Lawrence R. J. 2002. Uniting the paths to gene silencing. Nat. Genet. 32 : 340-341.
54. Ploton D., O'Donohue M. F., Cheutin T., Beorchia A., Kaplan H., Thiry M. 2004. Three-dimensional organization of rDNA and transcription. In: The nucleolus. New York: Kluwer Acad, Plenum Publ. : 156-172.
55. Raška 1. 2003. Oldies but goldies: searching for Christmas trees within the nucleolar architecture. Trends Cell Biol. 13 : 517-525.
56. Raška I., Dundr M., Koberna K., Melcak I., Risueno M. C., Torokl. 1995. Does the synthesis of ribosomal RNA take place within nucleolar fibrillar centers or dense fibrillar components? A critical appraisal. J. Struct. Biol. 114 : 1-22.
57. Raška I., Koberna K., Malinsky J., Fidlerova H., Masata M. 2004. The nucleolus and transcription of ribosomal genes. Biol. Cell. 96 : 579-594.
58. Rizzoli R., Rizzi E., Falconi M., Galanzi A., Baratta B., Lattanzi G., Vitale M., Mazzotti G., Manzoli L. 1994. High resolution detection of uncoated metaphase chromosomes by means of field emission scanning electron microscopy. Chromosoma. 103 : 393-400.
59. Robert-Fortel I., Junera H.R., Geraud G., Hernandez-Verdun D. 1993. Three-dimensional organization of the ribosomal genes and Ag-NOR proteins during interphase and mitosis in PtK1 cells studied by confocal microscopy. Chromosoma. 102 : 146-157.
60. Roussel P., André C., Cornai L., Hernandez-Verdun D. 1996. The rDNA transcription machinery is assembled during mitosis in active NORs and absent in inactive NORs. J. Cell Biol. 133 : 235-246.
61. Roussel P., Hernandez- Verdun D. 1994. Identification of Ag-NOR proteins, markers of proliferation related to ribosomal gene activity. Exp. Cell Res. 214 : 465-472.
62. Sakai K., Ohta T., Minoshima S., Kudoh J., Wang Y., de Jong P. J., Shimizu N. 1995. Human ribosomal RNA gene cluster: identification of the proximal end containing a novel tandem repeat sequence. Genomics. 26 : 521-526.
63. Santoro R., Grummt I. 2001. Molecular mechanisms mediating methylation-dependent silencing of ribosomal gene transcription. Mol. Cell. 8 : 719-725.
64. Santoro R., Li J., Grummt I. 2002. The nucleolar remodeling complex NoRC mediates heterochromatin formation and silencing of ribosomal gene transcription. Nat. Genet. 32 : 393-396.
65. Scheer U., Hock R. 1999. Structure and function of the nucleolus. Curr. Opin. Cell Biol. 11 : 385-390.
66. Scheer U., Rose K. M. 1984. Localization of RNA polymerase I in interphase cells and mitotic chromosomes by light and electron microscopic immunocytochemistry. Proc. Nat. Acad. Sci. USA. 81 : 1431-1435.
67. Sirri V., Roussel P., Hernandez-Verdun D. 2000. The AgNOR proteins: qualitative and quantitative changes during the cell cycle. Micron. 31 : 121-126.
68. Srivastava A. K., Hagino Y., Schlessinger D. 1993. Ribosomal DNA clusters in pulsed-field gel electrophoretic analysis of human acrocentric chromosomes. Mamm. Genome. 4 : 445-450.
69. Stefanova V. N. 1990. Characterization of the pig kidney (PK) cell line using differential banding techniques. In: Abstr. of the 9th Eur. colloquium on cytogenetics of domestic animals; 7-13 July; Toulouse - Auzeville. 41.
70. Strohner R., Nemeth A., Jansa P., Hofmann-Rohrer U., Santoro R., Langst G., Grummt I. 2001. NoRC - a novel member of mammalian ISWI-containing chromatin remodeling machines. EMBO J. 20 : 4892-4900.
71. Strohner R., Nemeth A., Nightingale K. P., Grummt I., Becker P. B., Langst G. 2004. Recruitment of the nucleolar remodeling complex NoRC establishes ribosomal DNA silencing in chromatin. Mol. Cell. Biol. 24 : 1791-1798.
72. Suja J. A., Gebrane-Younes J., Geraud G., Hernandez-Verdun D. 1997. Relative distribution of rDNA and proteins of the RNA polymerase I transcription machinery at chromosomal NORs. Chromosoma. 105 : 459-469.
73. Sylvester J. E., Gonzalez I. L., Mougey E. B. 2004. Structure and organization of vertebrate ribosomal RNA genes. In: The nucleolus. New York: Kluwer Acad. Plenum Publ. 58-73.
74. Tamayo J. 2003. Structure of human chromosomes studies by atomic force microscopy. J. Struct. Biol. 141 : 198-207.
75. Tamayo J., Miles M., Thein A., Soothill P. 199. Selective cleaning of the cell debris in human chromosome preparations studied by scanning force microscopy. J. Struct. Biol. 128 : 200-210.
76. Thiry M., Goessens G. 1996. The nucleolus during the cell cycle. New York: Hong Kong, Austin. Tex., Springer; R. G. Landes Comp. 146 p.
77. Weisenberger D., Scheer U. 1995. A possible mechanism for the inhibition of ribosomal RNA gene transcription during mitosis. J. Cell Biol. 129 : 561-575.
78. Worton R. G., Sutherland J., Sylvester J. E., Willard H. F., Bodrug S., Dube I., Duff C., Kean V., Ray P. N., Schmickel R. D. 1988. Human ribosomal RNA genes: orientation of the tandem array and conservation of the 5′ end. Science. 239 : 64-68.
79. Wu C., Morris J. R. 2001. Genes, genetics, and epigenetics: a correspondence. Science. 293 : 1103-1105.
80. Zhou Y., Santoro R., Grummt I. 2002. The chromatin remodeling complex NoRC targets HDACl to the ribosomal gene promoter and represses RNA polymerase I transcription. EMBO J. 21 : 4632-4640.