Peroxisome biogenesis: The peroxisomal endomembrane system and the role of the ER

Journal of Cell Biology

Volumn 174, Issue 1, 2006, Pages 11-17

  Titorenko, Vladimir I ^a   Mullen, Robert T ^b  

^a Gina Cody School of Engineering and Computer Science   (Canada)

^b UNIVERSITY OF GUELPH   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

COAT PROTEIN COMPLEX I; COAT PROTEIN COMPLEX II; MEMBRANE PROTEIN; PROTEIN PEROXISOMAL MEMBRANE PROTEIN; UNCLASSIFIED DRUG;

BIOGENESIS; CELL GROWTH; CELL MEMBRANE; CELL SELECTION; ENDOPLASMIC RETICULUM; MEMBRANE VESICLE; NONHUMAN; PEROXISOME; PRIORITY JOURNAL; PROTEIN TRANSPORT; SHORT SURVEY;

ANIMALS; ENDOPLASMIC RETICULUM; HUMANS; INTRACELLULAR MEMBRANES; MEMBRANE PROTEINS; MODELS, BIOLOGICAL; PEROXISOMES;

EID: 33745632081     PISSN: 00219525     EISSN: 00219525     Source Type: Journal    
DOI: 10.1083/jcb.200604036     Document Type: Short Survey

References (49)

1. Anton, M., M. Passreiter, D. Lay, T.P. Thai, K. Gorgas, and W.W. Just. 2000. ARF- and coatomer-mediated peroxisomal vesiculation. Cell Biochem. Biophys. 32:27-36.
2. Baerends, R.J.S., S.W. Rasmussen, R.E. Hilbrands, M. van der Heide, K.N. Faber, P.T.W. Reuvekamp, J.A.K.W. Kiel, J.M. Cregg, I.J. van der Klei, and M. Veenhuis. 1996. The Hansenula polymorpha PER9 gene encodes a peroxisomal membrane protein essential for peroxisome assembly and integrity. J. Biol. Chem. 271:8887-8894.
3. Bascom, R.A., H. Chan, and R.A. Rachubinski. 2003. Peroxisome biogenesis occurs in an unsynchronized manner in close association with the endoplasmic reticulum in temperature-sensitive Yarrowia lipolytica Pex3p mutants. Mol. Biol. Cell. 14:939-957.
4. Beevers, H. 1979. Microbodies in higher plants. Annu. Rev. Plant Physiol. 30:159-193.
5. Boukh-Viner, T., T. Guo, A. Alexandrian, A. Cerracchio, C. Gregg, S. Haile, R. Kyskan, S. Milijevic, D. Oren, J. Solomon, et al. 2005. Dynamic ergosteroland ceramide-rich domains in the peroxisomal membrane serve as an organizing platform for peroxisome fusion. J. Cell Biol. 168:761-773.
6. Chapman, K.D., and R.N. Trelease. 1991. Acquisition of membrane lipids by differentiating glyoxysomes: role of lipid bodies. J. Cell Biol. 115:995-1007.
7. Elgersma, Y., L. Kwast, M. van den Berg, W.B. Snyder, B. Distel, S. Subramani, and H.F. Tabak. 1997. Overexpression of Pex15p, a phosphorylated peroxisomal integral membrane protein required for peroxisome assembly in S. cerevisiae, causes proliferation of the endoplasmic reticulum membrane. EMBO J. 16:7326-7341.
8. Geuze, H.J., J.L. Murk, A.K. Stroobants, J.M. Griffith, M.J. Kleijmeer, A.J. Koster, A.J. Verkleij, B. Distel, and H.F. Tabak. 2003. Involvement of the endoplasmic reticulum in peroxisome formation. Mol. Biol. Cell. 14:2900-2907.
9. Guo, T., Y.Y. Kit, J.-M. Nicaud, M.-T. Le Dall, S.K. Sears, H. Vali, H. Chan, R.A. Rachubinski, and V.I. Titorenko. 2003. Peroxisome division is regulated by a signal from inside the peroxisome. J. Cell Biol. 162:1255-1266.
10. Haan, G.-J., R.J.S. Baerends, A.M. Krikken, M. Otzen, M. Veenhuis, and I.J. van der Klei. 2006. Reassembly of peroxisomes in Hansenula polymorpha pex3 cells on reintroduction of Pex3p involves the nuclear envelope. FEMS Yeast Res. 6:186-194.
11. Hammond, A.T., and B.S. Glick. 2000. Dynamics of transitional endoplasmic reticulum sites in vertebrate cells. Mol. Biol. Cell. 11:3013-3030.
12. Hanton, S.L., L.E. Bortolotti, L. Renna, G. Stefano, and F. Brandizzi. 2005. Crossing the divide - transport between the endoplasmic reticulum and Golgi apparatus in plants. Traffic. 6:267-277.
13. Hoepfner, D., D. Schildknegt, I. Braakman, P. Philippsen, and H.F. Tabak. 2005. Contribution of the endoplasmic reticulum to peroxisome formation. Cell. 122:85-95.
14. Kim, P.K., R.T. Mullen, W. Schumann, and J. Lippincott-Schwartz. 2006. The origin and maintenance of mammalian peroxisomes involves a de novo PEX16-dependent pathway from the ER. J. Cell Biol. 173:521-532.
15. Kragt, A., T. Voorn-Brouwer, M. van den Berg, and B. Distel. 2005. Endoplasmic reticulum-directed Pex3p routes to peroxisomes and restores peroxisome formation in a Saccharomyces cerevisiae pex3Δ strain. J. Biol. Chem. 280:34350-34357.
16. Kunau, W.-H. 2005. Peroxisome biogenesis: end of the debate. Curr. Biol. 15:R774-R776.
17. Lay, D., B.L. Grosshans, H. Heid, K. Gorgas, and W.W. Just. 2005. Binding and functions of ADP-ribosylation factor on mammalian and yeast peroxisomes. J. Biol. Chem. 280:34489-34499.
18. Lazarow, P.B. 2003. Peroxisome biogenesis: advances and conundrums. Curr. Opin. Cell Biol. 15:489-497.
19. Lazarow, P.B., and Y. Fujiki. 1985. Biogenesis of peroxisomes. Annu. Rev. Cell Biol. 1:489-530.
20. Lee, M.C., E.A. Miller, J. Goldberg, L. Orci, and R. Schekman. 2004. Bi-directional protein transport between the ER and Golgi. Annu. Rev. Cell Dev. Biol. 20:87-123.
21. Levine, T. 2004. Short-range intracellular trafficking of small molecules across endoplasmic reticulum junctions. Trends Cell Biol. 14:483-490.
22. Lisenbee, C.S., M. Heinze, and R.N. Trelease. 2003. Peroxisomal ascorbate peroxidase resides within a subdomain of rough endoplasmic reticulum in wild-type Arabidopsis cells. Plant Physiol. 132:870-882.
23. Mayor, S., and H. Riezman. 2004. Sorting GPI-anchored proteins. Nat. Rev. Mol. Cell Biol. 5:110-120.
24. McCartney, A.W., J.S. Greenwood, M.R. Fabian, K.A. White, and R.T. Mullen. 2005. Localization of the tomato bushy stunt virus replication protein p33 reveals a peroxisome-to-endoplasmic reticulum sorting pathway. Plant Cell. 17:3513-3531.
25. Mullen, R.T., and R.N. Trelease. 2000. The sorting signals for peroxisomal membrane-bound ascorbate peroxidase are within its C-terminal tail. J. Biol. Chem. 275:16337-16344.
26. Mullen, R.T., C.S. Lisenbee, J.A. Miernyk, and R.N. Trelease. 1999. Peroxisomal membrane ascorbate peroxidase is sorted to a membranous network that resembles a subdomain of the endoplasmic reticulum. Plant Cell. 11:2167-2185.
27. Mullen, R.T., C.R. Flynn, and R.N. Trelease. 2001. How are peroxisomes formed? The role of the endoplasmic reticulum and peroxins. Trends Plant Sci. 6:256-261.
28. Mullen, R.T., A.W. McCartney, C.R. Flynn, and G.S.T. Smith. 2006. Peroxisome biogenesis and the formation of multivesicular peroxisomes during tombusvirus infection: a role for ESCRT? Can. J. Bot. 84:551-564.
29. Passreiter, M., M. Anton, D. Lay, R. Frank, C. Harter, F.T. Wieland, K. Gorgas, and W.W. Just. 1998. Peroxisome biogenesis: involvement of ARF and coatomer. J. Cell Biol. 141:373-383.
30. Purdue, P.E., and P.B. Lazarow. 2001. Peroxisome biogenesis. Annu. Rev. Cell Dev. Biol. 17:701-752.
31. Rossanese, O.W., J. Soderholm, B.J. Bevis, I.B. Sears, J. O'Connor, E.K. Williamson, and B.S. Glick. 1999. Golgi structure correlates with transitional endoplasmic reticulum organization in Pichia pastoris and Saccharomyces cerevisiae. J. Cell Biol. 145:69-81.
32. Salomons, F.A., I.J. van der Klei, A.M. Kram, W. Harder, and M. Veenhuis. 1997. Brefeldin A interferes with peroxisomal protein sorting in the yeast Hansenula polymorpha. FEBS Lett. 411:133-139.
33. Schekman, R. 2005. Peroxisomes: another branch of the secretory pathway? Cell. 122:1-2.
34. South, S.T., K.A. Sacksteder, X. Li, Y. Liu, and S.J. Gould. 2000. Inhibitors of COPI and COPII do not block PEX3-mediated peroxisome synthesis. J. Cell Biol. 149:1345-1360.
35. South, S.T., E. Baumgart, and S.J. Gould. 2001. Inactivation of the endoplasmic reticulum protein translocation factor, Sec61p, or its homolog, Ssh1p, does not affect peroxisome biogenesis. Proc. Natl. Acad. Sci. USA. 98:12027-12031.
36. Tabak, H.F., J.L. Murk, I. Braakman, and H.J. Geuze. 2003. Peroxisomes start their life in the endoplasmic reticulum. Traffic. 4:512-518.
37. Tam, Y.Y.C., A. Fagarasanu, M. Fagarasanu, and R.A. Rachubinski. 2005. Pex3p initiates the formation of a preperoxisomal compartment from a subdomain of the endoplasmic reticulum in Saccharomyces cerevisiae. J. Biol. Chem. 280:34933-34939.
38. Thoms, S., and R. Erdmann. 2005. Dynamin-related proteins and Pex11 proteins in peroxisome division and proliferation. FEBS J. 272:5169-5181.
39. Titorenko, V.I., and R.A. Rachubinski. 1998. Mutants of the yeast Yarrowia lipolytica defective in protein exit from the endoplasmic reticulum are also defective in peroxisome biogenesis. Mol. Cell. Biol. 18:2789-2803.
40. Titorenko, V.I., and R.A. Rachubinski. 2000. Peroxisomal membrane fusion requires two AAA family ATPases, Pex1p and Pex6p. J. Cell Biol. 150:881-886.
41. Titorenko, V.I., and R.A. Rachubinski. 2001. Dynamics of peroxisome assembly and function. Trends Cell Biol. 11:22-29.
42. Titorenko, V.I., G.A. Eitzen, and R.A. Rachubinski. 1996. Mutations in the PAY5 gene of the yeast Yarrowia lipolytica cause the accumulation of multiple subpopulations of peroxisomes. J. Biol. Chem. 271:20307-20314.
43. Titorenko, V.I., D.M. Ogrydziak, and R.A. Rachubinski. 1997. Four distinct secretory pathways serve protein secretion, cell surface growth, and peroxisome biogenesis in the yeast Yarrowia lipolytica. Mol. Cell. Biol. 17:5210-5226.
44. Titorenko, V.I., H. Chan, and R.A. Rachubinski. 2000. Fusion of small peroxisomal vesicles in vitro reconstructs an early step in the in vivo multi-step peroxisome assembly pathway of Yarrowia lipolytica. J. Cell Biol. 148:29-43.
45. Veenhuis, M., and J.M. Goodman. 1990. Peroxisomal assembly: membrane proliferation precedes the induction of the abundant matrix proteins in the methylotrophic yeast Candida boidinii. J. Cell Sci. 96:583-590.
46. Voorn-Brouwer, T., A. Kragt, H.F. Tabak, and B. Distel. 2001. Peroxisomal membrane proteins are properly targeted to peroxisomes in the absence of COPI- and COPII-mediated vesicular transport. J. Cell Sci. 114:2199-2204.
47. Wang, X., M.A. McMahon, S.N. Shelton, M. Nampaisansuk, J.L. Ballard, and J.M. Goodman. 2004. Multiple targeting modules on peroxisomal proteins are not redundant: discrete functions of targeting signals within Pmp47 and Pex8p. Mol. Biol. Cell. 15:1702-1710.
48. Watson, P., and D.J. Stephens. 2005. ER-to-Golgi transport: form and formation of vesicular and tubular carriers. Biochim. Biophys. Acta. 1744:304-315.
49. Yan, M., N. Rayapuram, and S. Subramani. 2005. The control of peroxisome number and size during division and proliferation. Curr. Opin. Cell Biol. 17:376-383.