Phylogenetic analysis of Nosema antheraeae (Microsporidia) isolated from Chinese oak silkworm, Antheraea pernyi

Journal of Eukaryotic Microbiology

Volumn 53, Issue 4, 2006, Pages 310-313

  Wang, Lin Ling ^a   Chen, Ke Ping ^a   Zhang, Ze ^b   Yao, Qin ^a   Gao, Gui Tian ^a   Zhao, Yuan ^a  

^a JIANGSU UNIVERSITY   (China)

^b SOUTHWEST UNIVERSITY   (China)

Author keywords

ITS; Nosema bombycis; Phylogenetic analysis; Small subunit rRNA

Indexed keywords

RIBOSOMAL SPACER DNA; RIBOSOME RNA;

BOOTSTRAPPING; GENE EXPRESSION; PATHOGEN; PHYLOGENETICS; RNA;

ANIMAL; ARTICLE; CHINA; CLASSIFICATION; FUNGAL GENE; GENETICS; ISOLATION AND PURIFICATION; LIFE CYCLE; MICROBIOLOGY; MOLECULAR GENETICS; NOSEMA; NUCLEOTIDE SEQUENCE; PHYLOGENY; RNA GENE; SILKWORM;

ANIMALS; BOMBYX; CHINA; DNA, RIBOSOMAL SPACER; GENES, FUNGAL; GENES, RRNA; LIFE CYCLE STAGES; MOLECULAR SEQUENCE DATA; NOSEMA; PHYLOGENY; RNA, RIBOSOMAL;

ANTHERAEA PERNYI; BOMBYX MORI; MICROSPORIDIA; NOSEMA; NOSEMA ANTHERAEAE; NOSEMA BOMBYCIS;

EID: 33745587542     PISSN: 10665234     EISSN: 15507408     Source Type: Journal    
DOI: 10.1111/j.1550-7408.2006.00106.x     Document Type: Article

References (28)

1. Baker, M. D., Vossbrinck, C. R., Didier, E. S., Maddox, J. V. & Shadduck, J. A. 1995. Small subunit ribosomal DNA phylogeny of various microsporidia with emphasis on AIDS related forms. J. Eukaryot. Microbiol., 42:564-570.
2. Ding, J., Su, G., Zhang, Y. & Yu, G. 1998. Study on infectivity of larva of Nosema antheraeae to histiocyte of Chinese oak silkworm larvae and multiplication. LiaoNing Agric. Sci., 4:6-10.
3. Fast, N. M., Logsdon, J. M. & Doolittle, W. F. 1999. Phylogenetic analysis of the TATA box binding protein (TBP) gene from Nosema tyriae: evidence for a microsporidia-fungi relationship and spliceosomal intron loss. Mol. Biol. Evol., 16:1415-1419.
4. Franzen, C., Muller, P., Hartmann, P., Hegener, M. & Schrappe, V. 1998. Polymerase chain reaction for diagnosis and species differentiation of microsporidia. Folia Parasitol. (Prague), 45:140-148.
5. Hatakeyama, Y., Bansal, A. K., Iwano, H., Kawakami, Y. & Ishihara, R. 2000. Characterisation of SSU-rRNA sequence of a new microsporidium, Nosema sp. (Nosematidae: Microsporidia), isolated from Antheraea mylitta Drury (Lepidoptera: Saturniidae) in India. Indian J. Seric., 39:131-134.
6. Hatakeyama, Y., Kawakami, Y., Iwano, H., Inoue, T. & Ishihara, R. 1997. Analysis and taxonomic inference of small subunit ribosomal RNA sequences of five microsporidia pathogenic to the silkworm, Bombyx mori. J. Seric. Sci. Jpn., 66:242-252.
7. Hirt, R. P., Logsdon, J. M., Healy, B., Dorey, M. W., Doolittle, W. F. & Embley, T. M. 1999. Microsporidia are related to fungi: evidence from the largest subunit of RNA polymerase II and other proteins. Proc. Natl. Acad. Sci. USA, 96:580-585.
8. Huang, H. W., Lo, C. F., Tseng, C. C., Peng, S. E., Chou, C. M. & Kou, C. H. 1998. The small subunit ribosomal RNA gene sequence of Pleistophora anguillarum and the use of PCR primers of diagnostic detection of the parasite. J. Eukaryot. Microbiol., 4:556-560.
9. Huang, W. F., Tsai, S. J., Lo, C. F., Soichi, Y. & Wang, C. H. 2004. The novel organization and complete sequence of the ribosomal RNA gene of Nosema bombycis. Fungal Genet. Biol., 41:473-481.
10. Keeling, P. J. & Doolittle, W. F. 1996. Alpha-tubulin from early-diverging eukaryotic lineages and the evolution of the tubulin family. Mol. Biol. Evol., 13:1297-1305.
11. Keeling, P. J., Luker, M. A. & Palmer, J. D. 2000. Evidence from beta-tubulin phylogeny that microsporidia evolved from within the fungi. Mol. Biol. Evol., 17:23-31.
12. Kimura, M. 1980. A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol., 16:111-120.
13. Kumar, S., Tamura, K. & Nei, M. 2004. MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief. Bioinform., 5:150-163.
14. Nilsen, F., Endresen, C. & Hordvik, I. 1998. Molecular phylogeny of microsporidians with particular reference to species that infect the muscle of fish. J. Eukaryot. Microbiol., 45:535-543.
15. Peyretaillade, E., Biderre, P., Peyret, F., Duffieux, G. & Metenier, M. 1998. Microsporidian Encephalitozoon cuniculi, a unicellular eukaryote, with an unusual chromosomal dispersion of ribosomal genes and a LSU rRNA reduced to the universal core. Nucleic Acids Res., 26: 3513-3520.
16. Rao, S. N., Muthulakshmi, M., Kanginakudru, S. & Nagaraju, J. 2004. Phylogenetic relationships of three new microsporidian isolates from the silkworm, Bombyx mori. J. Invertebr. Pathol., 86:87-95.
17. Rao, S. N., Nath, B. S. & Saratchandra, B. 2005. Characterization and phylogenetic relationships among microsporidia infecting silkworm, Bombyx mori, using inter simple sequence repeat (ISSR) and small subunit rRNA (SSU-rRNA) sequence analysis. Genome, 48:355-366.
18. Schmidt, H. A., Strimmer, K., Vingron, M. & von Haseler, A. 2002. TREE-PUZZLE: Maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics, 18:502-504.
19. Su, G. & Ding, J. 2003. Study on infectivity of Nosema antheraeae to histiocyte of Chinese oak silkworm larvae and multiplication. North. Agric. Sci., 24:34-35.
20. Swofford, D. L. 2003. PAUP*: Phylogenetic Analysis Using Parsimony (* and Other Methods). Version 4.0b10. Sinauer Associates, Sunderland, MA.
21. Terry, R. S., MacNeil, C., Dick, J. T. A., Smith, J. E. & Dunn, A. M. 2003. Resolution of a taxonomic conundrum: an ultrastructural and molecular description of the life cycle of Pleistophora mulleri (Pfeiffer 1895; Georgevitch 1929). J. Eukaryot. Microbiol., 50:266-273.
22. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. 1997. The CLUSTAL-X windows interference: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res., 25:4876-4882.
23. Tsai, S. J., Huang, W. F. & Wang, C. H. 2005. Complete sequence and gene organization of the Nosema spodopterae rRNA gene. J. Eukaryot. Microbiol., 52:52-54.
24. Tsai, S. J., Kou, G. H., Lo, C. F. & Wang, C. H. 2002. Complete sequence and structure of ribosomal RNA gene of Heterosporis anguillarum. Dis. Aquat. Org., 49:199-206.
25. Tsai, S. J., Lo, C. F., Soichi, Y. & Wang, C. H. 2003. The characterization of Microsporidian isolates (Nosematidae: Nosema) from five important lepidopteran pests in Taiwan. J. Invertebr. Pathol, 83:51-59.
26. Vossbrinck, C. R., Baker, M. D., Didier, E. S., Debruuner-Vossbrinck, B. A. & Woese, C. R. 1987. Ribosomal RNA sequence suggests microsporidia are extremely ancient eukaryotes. Nature, 326:411-414.
27. Zhang, Y., Ding, J., Yu, G. & Su, G. 1996. The relationship of pebrine of Antheraca perny and field insects. LiaoNing Agric. Sci., 5:31-34.
28. Zhu, X., Wittner, M., Tanowitz, H. B., Cali, A. & Weiss, L. M. 1994. Ribosomal RNA sequences of Enterocytozoon bieneusi, Septata intestinalis and Ameson michaelis: phylogenetic construction and structural correspondence. J. Eukaryot. Microbiol., 41:204-209.