Lateral organization of a membrane protein in a supported binary lipid domain: Direct observation of the organization of bacterial light-harvesting complex 2 by total internal reflection fluorescence microscopy

Langmuir

Volumn 22, Issue 12, 2006, Pages 5412-5418

  Dewa, Takehisa ^a,b   Sugiura, Ryuta ^a   Suemori, Yoshiharu ^a   Sugimoto, Miku ^a   Takeuchi, Toshikazu ^a   Hiro, Akito ^a   Iida, Kouji ^c   Gardiner, Alastair T ^d   Cogdell, Richard J ^d   Nango, Mamoru ^a  

^a NAGOYA INSTITUTE OF TECHNOLOGY   (Japan)

^b JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

^c NAGOYA MUNICIPAL INDUSTRIAL RESEARCH INSTITUTE   (Japan)

^d UNIVERSITY OF GLASGOW   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEXATION; DIFFUSION; FLUORESCENCE; PHASE SEPARATION; PHOSPHOLIPIDS; POSITIVE IONS;

1,2-DISTEAROLY-SN-3-[PHOSPHO-RAC-(1′-GLYCEROL)] (DSPG); MEMBRANE PROTEIN; TOTAL INTERNAL REFLECTION FLUORESCENCE (TIRF);

PROTEINS;

BACTERIAL PROTEIN;

ARTICLE; CYTOLOGY; ENZYMOLOGY; FLUORESCENCE MICROSCOPY; LIGHT HARVESTING SYSTEM; LIPID BILAYER; RHODOPSEUDOMONAS;

BACTERIAL PROTEINS; LIGHT-HARVESTING PROTEIN COMPLEXES; LIPID BILAYERS; MICROSCOPY, FLUORESCENCE; RHODOPSEUDOMONAS;

EID: 33745447698     PISSN: 07437463     EISSN: None     Source Type: Journal    
DOI: 10.1021/la060275d     Document Type: Article

References (59)

1. (a) Gennis, K. B. Biomembranes: Molecular Structure and Function; Springer-Verlag: New York, 1989.
2. (b) Yeagle, P. L., Ed. The Structrure of Biological Membranes, 2nd ed.; CRC Press: New York, 2005.
3. (c) Quinn, P. J., Ed. Membrane Dynamics and Domains: Subcellular Biochemistry; Kluwer Academic/Plenum Publishers: New York, 2004.
4. (a) Simons, K.; Ikonen, E. Science 2000, 290, 1721-1726.
5. (b) van Meer, G.; Lisman, Q. J. Biol. Chem. 2002, 277, 25855-25858.
6. (c) Simons, K.; Toomre, D. Nat. Rev. Mol. Cell Biol. 2000, 1, 31-39.
7. (d) Sugahara, M.; Uragami, M.; Regen, S. L. J. Am. Chem. Soc. 2003, 125, 13040-13041.
8. (a) Bahatyrova, S.; Frese, R. N.; Siebert, C. A.; Olsen, J. D.; van der Werf, K. O.; van Grondelle, R.; Niederman, R. A.; Bullough, P. A.; Otto, C.; Hunter, C. N. Nature 2004, 430, 1058-1062.
9. (b) Scheuring, S.; Sturgis, J. N.; Prima, V.; Bernadac, A.; Lévy, D.; Rigaud, J.-L. Proc. Natl. Acad. Sci. U.S.A. 2004, 101, 11293-11297.
10. Roszak, A. W.; Howard, T. D.; Southall, J.; Gardiner, A. T.; Law, C. J.; Isaacs, N. W.; Cogdell, R. J. Science 2003, 302, 1969-1972.
11. (a) McDermott, G.; Prince, S. M.; Freer, A. A.; Hawthornthwaite-Lawless, A. M.; Papiz, M. Z.; Cogdell, R. J.; Isaacs, N. W. Nature 1995, 374, 517-521.
12. (b) Papiz, M. Z.; Prince, S. M.; Howard, T.; Cogdell, R. J.; Issacs, N. W. J. Mol. Biol. 2003, 326, 1523-1538.
13. Shaw, J. E.; Slade, A.; Yip, C. M. J. Am. Chem. Soc. 2003, 125, 11838-11839.
14. (a) Iino, R.; Koyama, I.; Kusumi, A. Biophys. J. 2001, 80, 2667-2677.
15. (b) Murase, K.; Fujiwara, T.; Umemura, Y.; Suzuki, K.; Iino, R.; Yamashita, H.; Saito, M.; Murakoshi, H.; Ritchie, K.; Kusumi, A. Biophys. J. 2004, 86, 4075-4093.
16. Markvart, T. Prog. Quantum Electron. 2000, 24, 107-186.
17. (a) Tamm, L. K.; McConnell, H. M. Biophys. J. 1985, 47, 105-113.
18. (b) McConnell, H. M.; Watts, T. H.; Weis, R. M.; Brian, A. A. Biochim. Biophys. Acta 1986, 864, 95-106.
19. (c) Sackmann, E. Science 1996, 271, 43-48.
20. (d) Tanaka, M;, Sackmann, E. Nature 2005, 437, 656-663.
21. (d) Salafsky, J.; Groves, J. T.; Boxer, S. O. Biochemistry, 1996, 35, 14773-14781.
22. (e) Groves, J. T.; Ulman, N.; Boxer, S. G. Science 1997, 275, 651-653.
23. (f) Groves, J. T.; Dustin, M. L. J. Immunol. Methods 2003, 278, 19-32.
24. (g) Boxer, S. G. Curr. Opin. Chem. Biol. 2000, 4, 704-709.
25. (h) Tero, R.; Takizawa, M.; Li, Y. -J.; Yamazaki, M.; Urisu, T. Langmuir 2004, 20, 7526-7531.
26. (i) Feigenson, G. W.; Buboltz, J. T. Biophys. J. 2001, 80, 2775-2788.
27. (a) Giess, F.; Friedrich, M. G.; Heberle, J.; Naumann, R. L.; Knoll, W. Biophys. J. 2004, 87, 3213-3220.
28. (b) Ataka, K.; Giess, F.; Knoll, W.; Naumann, R.; H.-Pohlmer, S.; Ritcher, B.; Heberle, J. J. Am. Chem. Soc. 2004, 126, 16199-16206.
29. (c) Elie-Caille, C.; Fliniaux, O.; Pantigny, J.; Maziere, J.-C.; Bourdillon, C. Langmuir 2005, 21, 4661-4668.
30. (d) Tero, R.; Misawa, N.; Watanabe, H.; Yamamura, S.; Nambu, S.; Nonogaki, Y; Urisu, T. e-J. Surf. Sci. Nanotech. 2005, 3, 237-243.
31. (e) Ganchev, D. N.; Rijkers, D. T. S.; Snel, M. M. E.; Killian, J. A.; de Kruijff, B. Biochemistry 2004, 43, 14987-14993.
32. (f) Epand, R. M.; Maekawa, S.; Yip, C. M.; Epand, R. F. Biochemistry 2001, 40, 10514-10521.
33. (g) Last, J. A.; Waggoner, T. A.; Sasaki, D. Y. Biophys. J. 2001, 81, 2737-2742.
34. (a) Alberts, B.; Johnson, A.; Lewis, J.; Raff, M.; Roberts, K.; Walter, P. Molecular Biology of the Cell, 4th ed.; Garland Science: New York, 2001; Chapter 12.
35. (b) Hessa, T.; Kim, H.; Bilhlmaier, K.; Lundin, C.; Boekel, J.; Andersson, H.; Nilsson, I.; White, S. H.; von Heijne, G. Nature 2005, 433, 377-381.
36. Dewa, T.; Yoshida, K.; Sugimoto, M.; Sugiura, R.; Nango, M. e-J. Surf. Sci. Nanotech. 2005, 3, 145-150.
37. Dewa, T.; Yamada, T.; Ogawa, M.; Sugimoto, M.; Mizuno, T.; Yoshida, K.; Nakao, Y.; Kondo, M.; Iida, K.; Yamashita, K. Tanaka, T.; Nango, M. Biochemistry 2005, 44, 5129-5139.
38. Kahya, N.; Pécheur, E.-I.; de Boeij, W. P.; Wiersma, D. A.; Hoekstra, D. Biophys. J. 2001, 81, 1464-1474.
39. Chanturia, A.; Chernomoridik, L. V.; Zimmerberg, J. Proc. Natl. Acad. Sci. U.S.A. 1997, 94, 14423-1428.
40. PapizA. M. Z.; Hawthornthwaite, M.; Cogdell, R. J.; Woolley, K. J.; Wightman, P. A.; Ferguson, L. A.; Lindsay, J. G. J. Mol. Biol. 1989, 209, 833-835.
41. Fang, Y.; Frutos, A. G.; Lahiri, J. J. Am. Chem. Soc. 2002, 124, 2394-2395.
42. (a) Angelova, M. I.; Soléau, S.; Méléard, P.; Faucon, J. F.; Bothorel, P. Prog. Colloid Polym. Sci. 1992, 89, 127.
43. (b) Angelova, M. I.; Dimitrov, D. S. Faraday Discuss. Chem. Soc. 1986, 81, 303-311.
44. (a) MacDonald, R. C.; Ashley, G. W.; Shida, M. M.; Rakhmanova, V. A.; Tarahovsky, Y. S.; Pantazatos, D. P.; Kennedy, M. T.; Pozharski, E. V.; Baker, K. A.; Jones, R. D.; Rosenzweig, H. S.; Choi, K. L.; Qiu, R.; McIntosh, T. J. Biophys. J. 1999, 77, 2612-2629.
45. (b) Rosenzweig, H. S.; Rakhmanova, V. A.; McIntosh, T. J.; MacDonald, R. C. Biocunjugate Chem. 2000, 11, 306-313.
46. The surface smoothness of the cleaned and APS-modified coverslips was evaluated by AFM. In the range of 3 [im of line profile, asperities were less than 0.7 for the cleaned bare coverslip and 10 nm for APS-modified coverslip, respectively.
47. The fluorescent lipid, N-Rh-DOPE, is preferentially incorporated into the fluidic DOPG domain.
48. Because the intensity profile of the laser cross section has a Gaussian distribution, the intensity of the evanescent illumination can be approximately regarded as this distribution.
49. Johnson, J. M.; Ha, T.; Chu, S.; Boxer, S. G. Biophys. J. 2002, 83, 3371-3379.
50. Sonnleitner, A.; Schütz, G. J.; Schmidt, Th. Biophys. J. 1999, 77, 2638-2642.
51. Georgakopoulou, S.; Frese, R. N.; Johnson, E.; Koolhaas, C.; Cogdell, R. J.; van Grondelle, R.; van der Zwan, G. Biophys. J. 2002, 82, 2184-2197.
52. Nomura, F.; Nagata, M.; Inaba, T.; Hiramatsu, H.; Hotani, H.; Takiguchi, K. Proc. Natl. Acad. Sci. U.S.A. 2001, 95, 2340-2345.
53. (a) Kahya, N; Brown, D. A.; Schwille, P. Biochemistry 2005, 44, 7479-7489.
54. (b) Baumgart, T.; Hess, S. T.; Webb, W. W. Nature 2003, 425, 821-824.
55. (c) Dietrich, C.; Bagatolli, L. A.; Volovyk, N. Z.; Thompson, N. L. Levi, M.; Jacobson, K.; Gratton, E. Biophys. J. 2001, 80, 1417-1428.
56. (d) Feigerson, G. W.; Buboltz, J. T. Biophys. J. 2001, 80, 2775-2788.
57. (a) Lei, G.; MacDonald, R. C. Biophys. J. 2003, 85, 1585-1599.
58. (b) Pantazatos, D. P.; MacDonald, R. C. J. Membr. Biol. 1999, 170, 27-38.
59. Girard, P.; Pécréaux, J.; Lenoir, G.; Falson, F.; Rigaud, J.-L.; Bassereau, P. Biophys. J. 2004, 87, 419-429.