Living under an atomic force microscope: An optimized approach for in vivo investigations on surface alterations towards biomineral nucleation on cyanobacterial cells

Geobiology

Volumn 3, Issue 3, 2005, Pages 179-193

  Obst, M ^a   Dittrich, M ^a  

^a Limnological Research Center   (Switzerland)

Author keywords

[No Author keywords available]

Indexed keywords

ATOMIC FORCE MICROSCOPY; BACTERIUM; BIOMINERALIZATION; ENVIRONMENTAL CHANGE; KINETICS; NUCLEATION;

BACTERIA (MICROORGANISMS); CYANOBACTERIA; SYNECHOCOCCUS; SYNECHOCOCCUS LEOPOLIENSIS;

EID: 33745423615     PISSN: 14724677     EISSN: 14724669     Source Type: Journal    
DOI: 10.1111/j.1472-4669.2005.00054.x     Document Type: Article

References (64)

1. Agawin NSR Duarte CM Agusti S ( 2000a) Nutrient and temperature control of the contribution of picoplankton to phytoplankton biomass and production. Limnology and Oceanography 45, 1891 1891.
2. Agawin NSR Duarte CM Agusti S ( 2000b) Nutrient and temperature control of the contribution of picoplankton to phytoplankton biomass and production. Limnology and Oceanography 45, 591 600.
3. Allakhverdiev SI Sakamoto A Nishiyama Y Murata N ( 2000) Inactivation of photosystems I and II in response to osmotic stress in Synechococcus. Contribution of water channels. Plant Physiology 122, 1201 1208.
4. Allen MM ( 1984) Cyanobacterial Cell Inclusions. Annual Review of Microbiology 38, 1 25.
5. Arino X Ortegacalvo JJ Hernandezmarine M Saizjimenez C ( 1995) Effect of sulfur starvation on the morphology and ultrastructure of the cyanobacterium Gloeothece sp. PCC-6909. Archives of Microbiology 163, 447 453.
6. Barker-Astrom K Schelin J Gustafsson P Clarke AK Campbell DA ( 2005) Chlorosis during nitrogen starvation is altered by carbon dioxide and temperature status and is mediated by the ClpP1 protease in Synechococcus elongatus. Archives of Microbiology 183, 66 69.
7. Becker S Singh AK Postius C Boger P Ernst A ( 2004) Genetic diversity and distribution of periphytic Synechococcus spp. in biofilms and picoplankton of Lake Constance. FEMS Microbiology Ecology 49, 181 190.
8. Begg KJ Donachie WD ( 1998) Division planes alternate in spherical cells of Escherichia coli. Journal of Bacteriology 180, 2564 2567.
9. Bloesch J ( 1974) Sedimentation und Phosphorhaushalt im Vierwaldstättersee (Horwer Bucht) und im Rotsee. Schweizerische Zeitschrift für Hydrologie 36, 71 186.
10. Bolshakova AV Kiselyova OI Filonov AS Frolova OY Lyubchenko YL Yaminsky IV ( 2001) Comparative studies of bacteria with an atomic force microscopy operating in different modes. Ultramicroscopy 86, 121 128.
11. Borrok D Fein JB Tischler M O'Loughlin E Meyer H Liss M Kemner KM ( 2004) The effect of acidic solutions and growth conditions on the adsorptive properties of bacterial surfaces. Chemical Geology 209, 107 119.
12. Camesano TA Natan MJ Logan BE ( 2000) Observation of changes in bacterial cell morphology using tapping mode atomic force microscopy. Langmuir 16, 4563 4572.
13. Collier JL Grossman AR ( 1992) Chlorosis-induced by nutrient deprivation in Synechococcus sp. strain PCC-7942 - Not all bleaching is the same. Journal of Bacteriology 174, 4718 4726.
14. Crawford SA Higgins MJ Mulvaney P Wetherbee R ( 2001) Nanostructure of the diatom frustule as revealed by atomic force and scanning electron microscopy. Journal of Phycology 37, 543 554.
15. Decho AW ( 1990) Microbial exopolymer secretions in ocean environments - Their role (S) in food webs and marine processes. Oceanography and Marine Biology 28, 73 153.
16. Dittrich M Obst M ( 2004) Are picoplankton responsible for calcite precipitation in lakes? Ambio 33, 559 564.
17. Doktycz MJ Sullivan CJ Hoyt PR Pelletier DA Wu S Allison DP ( 2003) AFM imaging of bacteria in liquid media immobilized on gelatin coated mica surfaces. Ultramicroscopy 97, 209 216.
18. Dufrene YF ( 2003) Recent progress in the application of atomic force microscopy imaging and force spectroscopy to microbiology. Current Opinion in Microbiology 6, 317 323.
19. Dufrene YF ( 2004) Using nanotechniques to explore microbial surfaces. Nature Reviews Microbiology 2, 451 460.
20. Ernst A Deicher M Herman PMJ Wollenzien UIA ( 2005) Nitrate and phosphate affect cultivability of cyanobacteria from environments with low nutrient levels. Applied and Environmental Microbiology 71, 3379 3383.
21. Gad M Ikai A ( 1995) Method for immobilizing microbial cells on gel surface for dynamic AFM studies. Biophysical Journal 69, 2226 2233.
22. Gebeshuber IC Kindt JH Thompson JB Del Amo Y Stachelberger H Brzezinski MA Stucky GD Morse DE Hansma PK ( 2003) Atomic force microscopy study of living diatoms in ambient conditions. Journal of Microscopy 212, 292 299.
23. Goerl M Sauer J Baier T Forchhammer K ( 1998) Nitrogen-starvation-induced chlorosis in Synechococcus PCC 7942: adaptation to long-term survival. Microbiology 144, 2449 2458.
24. Golubic S ( 1973) The Relationship between Blue-Green Algae and Carbonate Deposits. In The Biology of Blue-Green Algae (eds Carr NG Whitton BA). Blackwell Scientific Publications, Oxford, London, Edinburgh, Melbourne.
25. Haas JR ( 2004) Effects of cultivation conditions on acid-base titration properties of Shewanella putrefaciens. Chemical Geology 209, 67 81.
26. Hardie LP Balkwill DL Stevens SE ( 1983) Effects of iron starvation on the ultrastructure of the cyanobacterium Agmenellum quadruplicatum. Applied and Environmental Microbiology 45, 1007 1017.
27. Higgins MJ Sader JE Mulvaney P Wetherbee R ( 2003) Probing the surface of living diatoms with atomic force microscopy: the nanostructure and nanomechanical properties of the mucilage layer. Journal of Phycology 39, 722 734.
28. Hoerber JKH Miles MJ ( 2003) Scanning probe evolution in biology. Science 302, 1002 1005.
29. Hohenberg H Mannweiler K Muller M ( 1994) High-pressure freezing of cell-suspensions in cellulose capillary tubes. Journal of Microscopy 175, 34 43.
30. James PJ Antognozzi M Tamayo J McMaster TJ Newton JM Miles MJ ( 2001) Interpretation of contrast in tapping mode AFM and shear force microscopy. A study of Nafion. Langmuir 17, 349 360.
31. Jena BP Hörber JKH ( 2002) Atomic Force Microscopy in Cell Biology. Academic Press, Amsterdam.
32. Kamruzzahan ASM Kienberger F Stroh CM Berg J Huss R Ebner A Zhu R Rankl C Gruber HJ Hinterdorfer P ( 2004) Imaging morphological details and pathological differences of red blood cells using tapping-mode AFM. Biological Chemistry 385, 955 960.
33. 2 concentrating mechanisms in photosynthetic microorganisms. Annual Review of Plant Physiology and Plant Molecular Biology 50, 539 570.
34. Kuznetsov YG Malkin AJ McPherson A ( 1997) Atomic force microscopy studies of living cells: visualization of motility, division, aggregation, transformation, and apoptosis. Journal of Structural Biology 120, 180 191.
35. 3+ on Escherichia coli by atomic force microscopy. Journal of Inorganic Biochemistry 98, 68 72.
36. Lotter AF Sturm M Teranes JL Wehrli B ( 1997) Varve formation since 1885 and high-resolution varve analyses in hypertrophic Baldeggersee (Switzerland). Aquatic Sciences 59, 304 325.
37. de Marsac NT Houmard J ( 1993) Adaptation of cyanobacteria to environmental stimuli - New steps towards molecular mechanisms. FEMS Microbiology Reviews 104, 119 189.
38. Marti O Amrein M (eds) ( 1993) STM and SFM in Biology. Academic Press, Inc, San Diego, California.
39. Matzke R Jacobson K Radmacher M ( 2001) Direct, high-resolution measurement of furrow stiffening during division of adherent cells. Nature Cell Biology 3, 607 610.
40. Merz MUE Zankl H ( 1993) The influence of culture conditions on growth and sheath development of calcifying cyanobacteria. Facies 29, 75 80.
41. Merz-Preiss M ( 2000) Calcification in cyanobacteria. In Microbial Sediments (eds Riding RE Awramik SM). Springer Verlag, Berlin, Heidelberg, New York, Berlin, Heidelberg, New York, pp. 50 56.
42. Müller DJ Fotiadis D Scheuring S Muller SA Engel A ( 1999) Electrostatically balanced subnanometer imaging of biological specimens by atomic force microscope. Biophysical Journal 76, 1101 1111.
43. Potts M ( 1994) Desiccation tolerance of prokaryotes. Microbiological Reviews 58, 755 805.
44. Potts M Bowman MA Morrison NS ( 1984) Control of matric water potential (psi-m) in immobilized cultures of cyanobacteria. FEMS Microbiology Letters 24, 193 196.
45. Raghavan D VanLandingham M Gu X Nguyen T ( 2000) Characterization of heterogeneous regions in polymer systems using tapping mode and force mode atomic force microscopy. Langmuir 16, 9448 9459.
46. Ritchie RJ Nadolny C Larkum AWD ( 1996) Driving forces for bicarbonate transport in the cyanobacterium Synechococcus R-2 (PCC 7942). Plant Physiology 112, 1573 1584.
47. Santschi PH Balnois E Wilkinson KJ Zhang JW Buffle J Guo LD ( 1998) Fibrillar polysaccharides in marine macromolecular organic matter as imaged by atomic force microscopy and transmission electron microscopy. Limnology and Oceanography 43, 896 908.
48. Sauer J Schreiber U Schmid R Volker U Forchhammer K ( 2001) Nitrogen starvation-induced chlorosis in Synechococcus PCC 7942. Low-level photosynthesis as a mechanism of long-term survival. Plant Physiology 126, 233 243.
49. Schultze-Lam S Beveridge TJ ( 1994a) Physicochemical characteristics of the mineral-forming S-layer from the cyanobacterium Synechococcus strain Gl24. Canadian Journal of Microbiology 40, 216 223.
50. Schultze-Lam S Beveridge TJ ( 1994b) Nucleation of celestite and strontianite on a cyanobacterial S-layer. Applied and Environmental Microbiology 60, 447 453.
51. Schultze-Lam S Harauz G Beveridge TJ ( 1992) Participation of a cyanobacterial S-layer in fine-grain mineral formation. Journal of Bacteriology 174, 7971 7981.
52. Smarda J Smajs D Komrska J Krzyzanek V ( 2002) S-layers on cell walls of cyanobacteria. Micron 33, 257 277.
53. Stanier RY Kunisawa R Mandel M Cohenbaz G ( 1971) Purification and properties of unicellular blue-green algae (Order Chroococcales). Bacteriological Reviews 35, 171 205.
54. Stockner J Callieri C Cronberg G ( 2000) Picoplankton and other non-bloom-forming cyanobacteria in lakes. In The Ecology of Cyanobacteria (eds Whitton BA Potts M). Kluwer Academic Publishers, Dordrecht, London, Boston, pp. 195 231.
55. Thompson JB SchultzeLam S Beveridge TJ DesMarais DJ ( 1997) Whiting events: biogenic origin due to the photosynthetic activity of cyanobacterial picoplankton. Limnology and Oceanography 42, 133 141.
56. Timmermans KR van der Wagt B Veldhuis MJW Maatman A de Baar HJW ( 2005) Physiological responses of three species of marine pico-phytoplankton to ammonium, phosphate, iron and light limitation. Journal of Sea Research 53, 109 120.
57. Touhami A Nysten B Dufrene YF ( 2003) Nanoscale mapping of the elasticity of microbial cells by atomic force microscopy. Langmuir 19, 4539 4543.
58. Touhami A Jericho MH Beveridge TJ ( 2004) Atomic force microscopy of cell growth and division in Staphylococcus aureus. Journal of Bacteriology 186, 3286 3295.
59. Vadillo-Rodriguez V Busscher HJ Norde W de Vries J Dijkstra RJB Stokroos I van der Mei HC ( 2004) Comparison of atomic force microscopy interaction forces between bacteria and silicon nitride substrata for three commonly used immobilization methods. Applied and Environmental Microbiology 70, 5541 5546.
60. Velegol SB Pardi S Li X Velegol D Logan BE ( 2003) AFM imaging artifacts due to bacterial cell height and AFM tip geometry. Langmuir 19, 851 857.
61. Wanner G Henkelmann G Schmidt A Kost HP ( 1986) Nitrogen and sulfur starvation of the cyanobacterium Synechococcus 6301 - An ultrastructural, morphometrical, and biochemical comparison. Zeitschrift Fur Naturforschung C-A Journal of Biosciences 41, 741 750.
62. Wilkinson KJ Balnois E Leppard GG Buffle J ( 1999) Characteristic features of the major components of freshwater colloidal organic matter revealed by transmission electron and atomic force microscopy. Colloids and Surfaces A: Physicochemical and Engineering Aspects 155, 287 310.
63. Yao X Walter J Burke S Stewart S Jericho MH Pink D et al. 2002) Atomic force microscopy and theoretical considerations of surface properties and turgor pressures of bacteria. Colloids and Surfaces B: Biointerfaces 23, 213 230.
64. You HX Lau JM Zhang SW Yu L ( 2000) Atomic force microscopy imaging of living cells: a preliminary study of the disruptive effect of the cantilever tip on cell morphology. Ultramicroscopy 82, 297 305.