메뉴 건너뛰기




Volumn 56, Issue 6, 2006, Pages 1233-1237

Dermacoccus abyssi sp. nov., a piezotolerant actinomycete isolated from the Mariana Trench

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; CYTOSINE; GUANINE; RNA 16S;

EID: 33745324987     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.64133-0     Document Type: Article
Times cited : (56)

References (40)
  • 2
    • 0000979238 scopus 로고
    • Isoprenoid quinones
    • Edited by M. Goodfellow & A. G. O'Donnell. Chichester: Wiley
    • Collins, M. D. (1994). Isoprenoid quinones. In Chemical Methods in Prokaryotic Systematics, pp. 265-309. Edited by M. Goodfellow & A. G. O'Donnell. Chichester: Wiley.
    • (1994) Chemical Methods in Prokaryotic Systematics , pp. 265-309
    • Collins, M.D.1
  • 3
    • 0033793083 scopus 로고    scopus 로고
    • Characterization of Micrococcaceae isolated from salt used for Spanish dry-cured ham
    • Cordero, M. R. & Zumalacárregui, J. M. (2000). Characterization of Micrococcaceae isolated from salt used for Spanish dry-cured ham. Lett Appl Microbiol 31, 303-306.
    • (2000) Lett Appl Microbiol , vol.31 , pp. 303-306
    • Cordero, M.R.1    Zumalacárregui, J.M.2
  • 4
    • 0025153193 scopus 로고
    • Characteristics of micrococci and staphylococci isolated from semi-preserved meat products
    • De la Rosa, M. C., Mohino, M. R., Mohino, M. & Mosso, M. A. (1990). Characteristics of micrococci and staphylococci isolated from semi-preserved meat products. Food Microbiol 7, 207-215.
    • (1990) Food Microbiol , vol.7 , pp. 207-215
    • De la Rosa, M.C.1    Mohino, M.R.2    Mohino, M.3    Mosso, M.A.4
  • 6
    • 0024358339 scopus 로고
    • Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains
    • Ezaki, T., Hashimoto, Y. & Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39, 224-229.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 224-229
    • Ezaki, T.1    Hashimoto, Y.2    Yabuuchi, E.3
  • 7
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: A maximum likelihood approach
    • Felsenstein, J. (1981). Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17, 368-376.
    • (1981) J Mol Evol , vol.17 , pp. 368-376
    • Felsenstein, J.1
  • 8
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 9
    • 0003437299 scopus 로고
    • Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, USA
    • Felsenstein, J. (1993). PHYLIP (phylogeny inference package), version 3.5c. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, USA.
    • (1993) PHYLIP (phylogeny Inference Package), Version 3.5c
    • Felsenstein, J.1
  • 10
    • 0014211361 scopus 로고
    • Construction of phylogenetic trees: A method based on mutation distances as estimated from cytochrome c sequences is of general applicability
    • Fitch, W. M. & Margoliash, E. (1967). Construction of phylogenetic trees: a method based on mutation distances as estimated from cytochrome c sequences is of general applicability. Science 155, 279-284.
    • (1967) Science , vol.155 , pp. 279-284
    • Fitch, W.M.1    Margoliash, E.2
  • 11
    • 84876693306 scopus 로고
    • Identification of Nocardia caviae (Erikson) nov. comb
    • Gordon, R. E. & Mihm, J. M. (1962). Identification of Nocardia caviae (Erikson) nov. comb. Ann N Y Acad Sci 98, 628-636.
    • (1962) Ann N Y Acad Sci , vol.98 , pp. 628-636
    • Gordon, R.E.1    Mihm, J.M.2
  • 12
    • 0030870230 scopus 로고    scopus 로고
    • Demetria terragena gen. nov., sp. nov., a new genus of actinomycetes isolated from compost soil
    • Groth, I., Schumann, P., Rainey, F. A., Martin, K., Schuetze, B. & Augsten, K. (1997). Demetria terragena gen. nov., sp. nov., a new genus of actinomycetes isolated from compost soil. Int J Syst Bacteriol 47, 1129-1133.
    • (1997) Int J Syst Bacteriol , vol.47 , pp. 1129-1133
    • Groth, I.1    Schumann, P.2    Rainey, F.A.3    Martin, K.4    Schuetze, B.5    Augsten, K.6
  • 13
    • 0027651025 scopus 로고
    • Thin-layer chromatographic analysis of glycolipids and mycolic acids from Mycobacterium farcinogenes, Mycobacterium senegalense and related taxa
    • Hamid, M. E., Minnikin, D. E., Goodfellow, M. & Ridell, M. (1993). Thin-layer chromatographic analysis of glycolipids and mycolic acids from Mycobacterium farcinogenes, Mycobacterium senegalense and related taxa. Zentralbl Bakteriol 279, 354-367.
    • (1993) Zentralbl Bakteriol , vol.279 , pp. 354-367
    • Hamid, M.E.1    Minnikin, D.E.2    Goodfellow, M.3    Ridell, M.4
  • 15
    • 0035173919 scopus 로고    scopus 로고
    • Physiology, biochemistry and taxonomy of deep-sea nitrile metabolising Rhodococcus strains
    • Heald, S. C., Brandão, P. F. B., Hardicre, R. & Bull, A. T. (2001). Physiology, biochemistry and taxonomy of deep-sea nitrile metabolising Rhodococcus strains. Antonie van Leeuwenhoek 80, 169-183.
    • (2001) Antonie Van Leeuwenhoek , vol.80 , pp. 169-183
    • Heald, S.C.1    Brandão, P.F.B.2    Hardicre, R.3    Bull, A.T.4
  • 16
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • Edited by H. N. Munro. New York: Academic Press
    • Jukes, T. H. & Cantor, C. R. (1969). Evolution of protein molecules. In Mammalian Protein Metabolism, vol. 3, pp. 21-132. Edited by H. N. Munro. New York: Academic Press.
    • (1969) Mammalian Protein Metabolism , vol.3 , pp. 21-132
    • Jukes, T.H.1    Cantor, C.R.2
  • 17
    • 0031196307 scopus 로고    scopus 로고
    • Molecular analyses of the sediment of the 11,000-m deep Mariana Trench
    • Kato, C., Li, L., Tamaoka, J. & Horikoshi, K. (1997). Molecular analyses of the sediment of the 11,000-m deep Mariana Trench. Extremophiles 1, 117-123.
    • (1997) Extremophiles , vol.1 , pp. 117-123
    • Kato, C.1    Li, L.2    Tamaoka, J.3    Horikoshi, K.4
  • 19
    • 0015951173 scopus 로고
    • Isolation and characterization of micrococci from human skin, including two new species: Micrococcus lylae and Micrococcus kristinae
    • Kloos, W. E., Tornabene, T. G. & Schleifer, K. H. (1974). Isolation and characterization of micrococci from human skin, including two new species: Micrococcus lylae and Micrococcus kristinae. Int J Syst Bacteriol 24, 79-101.
    • (1974) Int J Syst Bacteriol , vol.24 , pp. 79-101
    • Kloos, W.E.1    Tornabene, T.G.2    Schleifer, K.H.3
  • 20
    • 84963036271 scopus 로고
    • Quantitative phyletics and the evolution of anurans
    • Kluge, A. G. & Farris, F. S. (1969). Quantitative phyletics and the evolution of anurans. Syst Zool 18, 1-32.
    • (1969) Syst Zool , vol.18 , pp. 1-32
    • Kluge, A.G.1    Farris, F.S.2
  • 21
    • 0016697313 scopus 로고
    • Taxonomic status of Micrococcus nishinomiyaensis Oda 1935
    • Kocur, M., Schleifer, K. H. & Kloos, W. E. (1975). Taxonomic status of Micrococcus nishinomiyaensis Oda 1935. Int J Syst Bacteriol 25, 290-293.
    • (1975) Int J Syst Bacteriol , vol.25 , pp. 290-293
    • Kocur, M.1    Schleifer, K.H.2    Kloos, W.E.3
  • 22
    • 0000888174 scopus 로고
    • Chemotaxonomy of aerobic actinomycetes: Phospholipid composition
    • Lechevalier, M. P., De Bièvre, C. & Lechevalier, H. A. (1977). Chemotaxonomy of aerobic actinomycetes: phospholipid composition. Biochem Syst Ecol 5, 249-260.
    • (1977) Biochem Syst Ecol , vol.5 , pp. 249-260
    • Lechevalier, M.P.1    De Bièvre, C.2    Lechevalier, H.A.3
  • 23
    • 0036737876 scopus 로고    scopus 로고
    • Kineosphaera limosa gen. nov., sp. nov., a novel Gram-positive polyhydroxyalkanoate-accumulating coccus isolated from activated sludge
    • Liu, W.-T., Hanada, S., Marsh, T. L., Kamagata, Y. & Nakamura, K. (2002). Kineosphaera limosa gen. nov., sp. nov., a novel Gram-positive polyhydroxyalkanoate-accumulating coccus isolated from activated sludge. Int J Syst Evol Microbiol 52, 1845-1849.
    • (2002) Int J Syst Evol Microbiol , vol.52 , pp. 1845-1849
    • Liu, W.-T.1    Hanada, S.2    Marsh, T.L.3    Kamagata, Y.4    Nakamura, K.5
  • 24
    • 0023065116 scopus 로고
    • Gas chromatographic analysis of amino acids as the N-heptafluorobutyryl isobutyl esters
    • MacKenzie, S. L. (1987). Gas chromatographic analysis of amino acids as the N-heptafluorobutyryl isobutyl esters. J Assoc Off Anal Chem 70, 151-160.
    • (1987) J Assoc Off Anal Chem , vol.70 , pp. 151-160
    • MacKenzie, S.L.1
  • 25
    • 0030915099 scopus 로고    scopus 로고
    • Fatty acid characterization of rapidly growing pathogenic aerobic actinomycetes as a means of identification
    • McNabb, A., Shuttleworth, R., Behme, R. & Colby, W. D. (1997). Fatty acid characterization of rapidly growing pathogenic aerobic actinomycetes as a means of identification. J Clin Microbiol 35, 1361-1368.
    • (1997) J Clin Microbiol , vol.35 , pp. 1361-1368
    • McNabb, A.1    Shuttleworth, R.2    Behme, R.3    Colby, W.D.4
  • 27
    • 0343614376 scopus 로고
    • Bacteriological studies on waters used for brewing saké (part 6). I. Bacteriological studies on "miyamizu" (8) and (9) Micrococcus and Actinomyces isolated from "miyamizu"
    • (in Japanese)
    • Oda, M. (1935). Bacteriological studies on waters used for brewing saké (part 6). I. Bacteriological studies on "miyamizu" (8) and (9). Micrococcus and Actinomyces isolated from "miyamizu". Jozogaku Zasshi 13, 1202-1228 (in Japanese).
    • (1935) Jozogaku Zasshi , vol.13 , pp. 1202-1228
    • Oda, M.1
  • 29
    • 33744728757 scopus 로고    scopus 로고
    • Diversity of actinomycetes isolated from Challenge Deep sediment (10,898 m) from the Mariana Trench
    • (in press)
    • Pathom-aree, W., Stach, J. E. M., Ward, A. C., Horikoshi, K., Bull, A. T. & Goodfellow, M. (2006). Diversity of actinomycetes isolated from Challenge Deep sediment (10,898 m) from the Mariana Trench. Extremophiles (in press).
    • (2006) Extremophiles
    • Pathom-aree, W.1    Stach, J.E.M.2    Ward, A.C.3    Horikoshi, K.4    Bull, A.T.5    Goodfellow, M.6
  • 30
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 31
    • 0000943532 scopus 로고
    • Analysis of the chemical composition and primary structure of murein
    • Schleifer, K. H. (1985). Analysis of the chemical composition and primary structure of murein. Methods Microbiol 18, 123-156.
    • (1985) Methods Microbiol , vol.18 , pp. 123-156
    • Schleifer, K.H.1
  • 32
    • 0015462556 scopus 로고
    • Peptidoglycan types of bacterial cell walls and their taxonomic implications
    • Schleifer, K. H. & Kandler, O. (1972). Peptidoglycan types of bacterial cell walls and their taxonomic implications. Bacteriol Rev 36, 407-477.
    • (1972) Bacteriol Rev , vol.36 , pp. 407-477
    • Schleifer, K.H.1    Kandler, O.2
  • 33
    • 33745289887 scopus 로고    scopus 로고
    • The family Dermatophilaceae
    • 3rd edn, release 3.15 (December 2003). Edited by M. Dworkin and others. New York: Springer
    • Stackebrandt, E. (2003). The family Dermatophilaceae. In The Prokaryotes: an Evolving Electronic Resource for the Microbiological Community, 3rd edn, release 3.15 (December 2003). Edited by M. Dworkin and others. New York: Springer. http://link.springer-ny.com/link/service/ books/10125/
    • (2003) The Prokaryotes: An Evolving Electronic Resource for the Microbiological Community
    • Stackebrandt, E.1
  • 34
    • 0034029213 scopus 로고    scopus 로고
    • Description of Bogoriellaceae fam. nov., Dermacoccaceae fam. nov., Rarobacteraceae fam. nov. and Sanguibacteraceae fam. nov. and emendation of some families of the suborder Micrococcaneae
    • Stackebrandt, E. & Schumann, P. (2000). Description of Bogoriellaceae fam. nov., Dermacoccaceae fam. nov., Rarobacteraceae fam. nov. and Sanguibacteraceae fam. nov. and emendation of some families of the suborder Micrococcaneae. Int J Syst Evol Microbiol 50, 1279-1285.
    • (2000) Int J Syst Evol Microbiol , vol.50 , pp. 1279-1285
    • Stackebrandt, E.1    Schumann, P.2
  • 35
    • 0028883728 scopus 로고
    • Taxonomic dissection of the genus Micrococcus: Kocuria gen. nov., Nesterenkonia gen. nov., Kytococcus gen. nov., Dermacoccus gen. nov., and Micrococcus Cohn 1872 gen. emend
    • Stackebrandt, E., Koch, C., Gvozdiak, O. & Schumann, P. (1995). Taxonomic dissection of the genus Micrococcus: Kocuria gen. nov., Nesterenkonia gen. nov., Kytococcus gen. nov., Dermacoccus gen. nov., and Micrococcus Cohn 1872 gen. emend. Int J Syst Bacteriol 45, 682-692.
    • (1995) Int J Syst Bacteriol , vol.45 , pp. 682-692
    • Stackebrandt, E.1    Koch, C.2    Gvozdiak, O.3    Schumann, P.4
  • 36
    • 0034525821 scopus 로고    scopus 로고
    • Characterisation of a lipomannan lipoglycan from the mycolic acid containing actinomycete Dietzia maris
    • Sutcliffe, I. C. (2000). Characterisation of a lipomannan lipoglycan from the mycolic acid containing actinomycete Dietzia maris. Antonie van Leeuwenhoek 78, 195-201.
    • (2000) Antonie Van Leeuwenhoek , vol.78 , pp. 195-201
    • Sutcliffe, I.C.1
  • 37
    • 0021715576 scopus 로고
    • Determination of DNA base composition by reversed-phase high-performance liquid chromatography
    • Tamaoka, J. & Komagata, K. (1984). Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25, 125-128.
    • (1984) FEMS Microbiol Lett , vol.25 , pp. 125-128
    • Tamaoka, J.1    Komagata, K.2
  • 38
    • 0032838537 scopus 로고    scopus 로고
    • A new rapid method of glycolate test by diethyl ether extraction, which is applicable to a small amount of bacterial cells of less than one milligram
    • Uchida, K., Kudo, T., Suzuki, K. I. & Nakase, T. (1999). A new rapid method of glycolate test by diethyl ether extraction, which is applicable to a small amount of bacterial cells of less than one milligram. J Gen Appl Microbiol 45, 49-56.
    • (1999) J Gen Appl Microbiol , vol.45 , pp. 49-56
    • Uchida, K.1    Kudo, T.2    Suzuki, K.I.3    Nakase, T.4
  • 39
    • 0002025216 scopus 로고
    • A taxonomic approach to selective isolation of streptomycetes from soil
    • Edited by L. Ortiz-Ortiz, L. F. Bojalil & V. Yakoleff. Orlando: Academic Press
    • Vickers, J. C., Williams, S. T. & Ross, G. W. (1984). A taxonomic approach to selective isolation of streptomycetes from soil. In Biological, Biochemical and Biomedical Aspects of Actinomycetes, pp. 553-561. Edited by L. Ortiz-Ortiz, L. F. Bojalil & V. Yakoleff. Orlando: Academic Press.
    • (1984) Biological, Biochemical and Biomedical Aspects of Actinomycetes , pp. 553-561
    • Vickers, J.C.1    Williams, S.T.2    Ross, G.W.3
  • 40
    • 0000770675 scopus 로고
    • Report of the ad hoc committee on reconciliation of approaches to bacterial systematics
    • & 9 other authors International Committee on Systematic Bacteriology
    • Wayne, L. G., Brenner, D. J., Colwell, R. R. & 9 other authors (1987). International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37, 463-464.
    • (1987) Int J Syst Bacteriol , vol.37 , pp. 463-464
    • Wayne, L.G.1    Brenner, D.J.2    Colwell, R.R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.