-
1
-
-
25444442089
-
Comparison of the accuracy of methods of computational haplotype inference using a large empirical dataset
-
Adkins, R. 2004. Comparison of the accuracy of methods of computational haplotype inference using a large empirical dataset. BMC Genet. 3(11), 22.
-
(2004)
BMC Genet.
, vol.3
, Issue.11
, pp. 22
-
-
Adkins, R.1
-
2
-
-
8444232868
-
A note on efficient computation of haplotypes via perfect phylogeny
-
Bafna, V., Gusfield, D., Hannenhalli, S., and Yooseph, S. 2004. A note on efficient computation of haplotypes via perfect phylogeny. J. Comp. Biol. 11(5), 858-866.
-
(2004)
J. Comp. Biol.
, vol.11
, Issue.5
, pp. 858-866
-
-
Bafna, V.1
Gusfield, D.2
Hannenhalli, S.3
Yooseph, S.4
-
3
-
-
0013251433
-
-
Technical Report CSE-2002-21, Department of Computer Science, The University of California at Davis
-
Bafna, V., Gusfield, D., Lancia, G., and Yooseph, S. 2002. Haplotyping as perfect phylogeny: A direct approach. Technical Report CSE-2002-21, Department of Computer Science, The University of California at Davis.
-
(2002)
Haplotyping As Perfect Phylogeny: A Direct Approach
-
-
Bafna, V.1
Gusfield, D.2
Lancia, G.3
Yooseph, S.4
-
4
-
-
0348226177
-
The haplotyping problem: An overview of computational models and solutions
-
Bonizzoni, P., Vedova, G.D., Dondi, R., and Li, J. 2003. The haplotyping problem: An overview of computational models and solutions. J. Comput. Sci. Technol. 18(6), 675-688.
-
(2003)
J. Comput. Sci. Technol.
, vol.18
, Issue.6
, pp. 675-688
-
-
Bonizzoni, P.1
Vedova, G.D.2
Dondi, R.3
Li, J.4
-
5
-
-
0025269067
-
Inference of haplotypes from pcr-amplified samples of diploid populations
-
Clark, A.G. 1990. Inference of haplotypes from pcr-amplified samples of diploid populations. Mol. Biol. Evol. 7, 111-122.
-
(1990)
Mol. Biol. Evol.
, vol.7
, pp. 111-122
-
-
Clark, A.G.1
-
6
-
-
0034791035
-
High-resolution haplotype structure in the human genome
-
Daly, M.J., Rioux, J.D., Schaffner, S.F., Hudson, T.J., and Lander, E.S. 2001. High-resolution haplotype structure in the human genome. Nature Genet. 29(2), 229-232.
-
(2001)
Nature Genet.
, vol.29
, Issue.2
, pp. 229-232
-
-
Daly, M.J.1
Rioux, J.D.2
Schaffner, S.F.3
Hudson, T.J.4
Lander, E.S.5
-
7
-
-
33745312237
-
A linear time algorithm for the perfect phylogeny haplotyping (pph) problem
-
Ding, Z., Filkov, V., and Gusfield, D. 2005. A linear time algorithm for the perfect phylogeny haplotyping (pph) problem. RECOMB '05.
-
(2005)
RECOMB '05
-
-
Ding, Z.1
Filkov, V.2
Gusfield, D.3
-
8
-
-
0037701054
-
Large scale reconstruction of haplotypes from genotype data
-
Eskin, E., Halperin, E., and Karp, R.M. 2003. Large scale reconstruction of haplotypes from genotype data. RECOMB '05.
-
(2003)
RECOMB '05
-
-
Eskin, E.1
Halperin, E.2
Karp, R.M.3
-
10
-
-
0035943090
-
Population genomics: Linkage disequilibrium holds the key
-
Goldstein, D.B., and Weale, M.E. 2002. Population genomics: Linkage disequilibrium holds the key. Curr. Biol. 11, 576-579.
-
(2002)
Curr. Biol.
, vol.11
, pp. 576-579
-
-
Goldstein, D.B.1
Weale, M.E.2
-
11
-
-
4143145578
-
Model-based inference of haplotype block variation
-
Greenspan, G., and Geiger, D. 2004. Model-based inference of haplotype block variation. J. Comp. Biol. 11(2-3), 493-504.
-
(2004)
J. Comp. Biol.
, vol.11
, Issue.2-3
, pp. 493-504
-
-
Greenspan, G.1
Geiger, D.2
-
13
-
-
0034812677
-
Inference of haplotypes from samples of diploid populations: Complexity and algorithms
-
Gusfield, D. 2001. Inference of haplotypes from samples of diploid populations: Complexity and algorithms. J. Comp. Biol. 8(3), 305-323.
-
(2001)
J. Comp. Biol.
, vol.8
, Issue.3
, pp. 305-323
-
-
Gusfield, D.1
-
14
-
-
0036374329
-
Haplotyping as perfect phylogeny: Conceptual framework and efficient solutions
-
Gusfield, D. 2002. Haplotyping as perfect phylogeny: Conceptual framework and efficient solutions. RECOMB '02.
-
(2002)
RECOMB '02
-
-
Gusfield, D.1
-
15
-
-
79959503826
-
The International HapMap Project
-
HapMapConsortium. 2003. The International HapMap Project. Nature 426, 789-796.
-
(2003)
Nature
, vol.426
, pp. 789-796
-
-
-
16
-
-
13844313862
-
Whole-genome patterns of common DNA variation in three human populations
-
Hinds, D., Stuve, L., Nilsen, G., Halperin, E., Eskin, E., Ballinger, D., Frazer, K., and Cox, D. 2005. Whole-genome patterns of common DNA variation in three human populations. Science 307, 1072-1079.
-
(2005)
Science
, vol.307
, pp. 1072-1079
-
-
Hinds, D.1
Stuve, L.2
Nilsen, G.3
Halperin, E.4
Eskin, E.5
Ballinger, D.6
Frazer, K.7
Cox, D.8
-
17
-
-
0022211482
-
Statistical properties of the number of recombination events in the history of a sample of DNA sequences
-
Hudson, R., and Kaplan, N. 1985. Statistical properties of the number of recombination events in the history of a sample of DNA sequences. Genetics 111, 147-165.
-
(1985)
Genetics
, vol.111
, pp. 147-165
-
-
Hudson, R.1
Kaplan, N.2
-
18
-
-
85087595798
-
Efficient rule-based haplotyping algorithms for pedigree data
-
Li, J., and Jiang, T. 2002. Efficient rule-based haplotyping algorithms for pedigree data. RECOMB '02.
-
(2002)
RECOMB '02
-
-
Li, J.1
Jiang, T.2
-
20
-
-
0036138183
-
Bayesian haplotype inference for multiple linked single-nucleotide polymorphisms
-
Niu, T., Qin, Z.S., Xu, X., and Liu, J.S. 2003. Bayesian haplotype inference for multiple linked single-nucleotide polymorphisms. Am. J. Human Genet. 70, 157-169.
-
(2003)
Am. J. Human Genet.
, vol.70
, pp. 157-169
-
-
Niu, T.1
Qin, Z.S.2
Xu, X.3
Liu, J.S.4
-
21
-
-
0036844521
-
Partition-ligation-expectation-maximization algorithm for haplotype inference with single-necleotide polymorphisms
-
Qin, Z.S., Niu, T., and Liu, J.S. 2002. Partition-ligation-expectation- maximization algorithm for haplotype inference with single-necleotide polymorphisms. Am. J. Human Genet., 1242-1247.
-
(2002)
Am. J. Human Genet.
, pp. 1242-1247
-
-
Qin, Z.S.1
Niu, T.2
Liu, J.S.3
-
22
-
-
0035837267
-
Linkage disequilibrium in the human genome
-
Reich, D.E., Cargill, M., Bolk, S., Ireland, J., Sabeti, P.C., Richter, D.J., Lavery, T., Kouyoumjian, R., Farhadian, S.F., Ward, R., and Lander, E.S. 2001. Linkage disequilibrium in the human genome. Nature 411, 199-204.
-
(2001)
Nature
, vol.411
, pp. 199-204
-
-
Reich, D.E.1
Cargill, M.2
Bolk, S.3
Ireland, J.4
Sabeti, P.C.5
Richter, D.J.6
Lavery, T.7
Kouyoumjian, R.8
Farhadian, S.F.9
Ward, R.10
Lander, E.S.11
-
23
-
-
33745301284
-
An efficient algorithm for perfect phylogeny haplotyping
-
VijayaSatya, R., and Mukherjee, A. 2005a. An efficient algorithm for perfect phylogeny haplotyping. Proc. CSB 2005, 103-110.
-
(2005)
Proc. CSB 2005
, pp. 103-110
-
-
Vijayasatya, R.1
Mukherjee, A.2
-
24
-
-
33745293366
-
-
Technical report CS-TR-05-01, School of Computer Science, University of Central Florida, Orlando
-
VijayaSatya, R., and Mukherjee, A. 2005b. An optimal algorithm for perfect phylogeny haplotyping. Technical report CS-TR-05-01, School of Computer Science, University of Central Florida, Orlando.
-
(2005)
An Optimal Algorithm for Perfect Phylogeny Haplotyping
-
-
Vijayasatya, R.1
Mukherjee, A.2
-
25
-
-
1642360208
-
Inference on recombination and block structure using unphased data
-
Wiuf, C. 2004. Inference on recombination and block structure using unphased data. Genetics 166(1), 537-545.
-
(2004)
Genetics
, vol.166
, Issue.1
, pp. 537-545
-
-
Wiuf, C.1
-
26
-
-
2442658957
-
Haplotype block partitioning and tag SNP selection using genotype data and their applications to association studies
-
Zhang, K., Qin, Z., Liu, J., Chen, T., Waterman, M., and Sun, F. 2004. Haplotype block partitioning and tag SNP selection using genotype data and their applications to association studies. Genome Res. 14(5), 908-916.
-
(2004)
Genome Res.
, vol.14
, Issue.5
, pp. 908-916
-
-
Zhang, K.1
Qin, Z.2
Liu, J.3
Chen, T.4
Waterman, M.5
Sun, F.6
-
27
-
-
0038376921
-
Dynamic programming algorithms for haplotype block partitioning: Applications to human chromosome 21 haplotype data
-
Zhang, K., Sun, F., Waterman, M.S., and Chen, T. 2003. Dynamic programming algorithms for haplotype block partitioning: Applications to human chromosome 21 haplotype data. RECOMB '03.
-
(2003)
RECOMB '03
-
-
Zhang, K.1
Sun, F.2
Waterman, M.S.3
Chen, T.4
|